| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 379,246 | (G)10→9 | intergenic (‑120/+47) | yaiN ← / ← yaiO | putative alpha helix chain/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 379,237 | 0 | G | . | 97.6% | 729.0 / 8.3 | 169 | intergenic (‑111/+56) | yaiN/yaiO | putative alpha helix chain/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (1/3); new base . (96/67); total (97/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 | |||||||||||
Only 100 of 203 total aligned reads displayed.
GTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTG > NC_000913/379145‑379325 | gTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAg < 2:3959451/93‑1 (MQ=255) aTTCTATATGTCAATGCATACCCCCATATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAggg > 1:6248499/1‑93 (MQ=255) tttaatGTCAATTCATTCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAgggggg < 2:5792403/89‑1 (MQ=255) cTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAgggggg < 1:285453/93‑1 (MQ=255) atGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAgggggggggc > 1:5765543/1‑92 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAgggggggggcta > 1:487755/1‑90 (MQ=255) tCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAgggggggggctaa < 2:2614058/93‑5 (MQ=255) tCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAgggggggggctaa > 1:1330426/1‑89 (MQ=255) cAATGCATCCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAAt < 2:1524680/93‑1 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAAt > 2:4798556/1‑93 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAAt > 2:683373/1‑93 (MQ=255) aTGCATCCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCg < 2:5148101/93‑1 (MQ=255) aTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCg < 1:5246122/93‑1 (MQ=255) gCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGc > 1:4510667/1‑93 (MQ=255) cATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAg > 1:4523076/1‑93 (MQ=255) aTACCCTCCTATATTATATAACGCTGGAGAATAAAATTTACCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAg < 2:823254/93‑1 (MQ=255) tACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAgg > 1:981089/1‑93 (MQ=255) aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAggg > 1:5348792/1‑93 (MQ=255) aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAggg > 1:4665010/1‑93 (MQ=255) aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAggg > 2:4374320/1‑93 (MQ=255) aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAggg > 2:6015059/1‑93 (MQ=255) ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGA‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGa < 1:322399/93‑1 (MQ=255) ccccTATGGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAg > 1:3083886/1‑93 (MQ=255) ccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAg > 1:333899/1‑93 (MQ=255) cttataGTATAAAACACGGAAAAATAAATTTTACCCGGTAAATGGGGGCGA‑AAAAAAAAG‑GGAAAAGGGGGGGGGCTAATCGGCAGGGAAGgc < 2:3400713/91‑1 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgc > 2:297044/1‑93 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgc < 2:4228958/93‑1 (MQ=255) ataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgccgc > 2:6060772/1‑93 (MQ=255) taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgccgcc > 2:1600238/1‑93 (MQ=255) aGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGccc > 1:3765034/1‑93 (MQ=255) aGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGcccc < 1:2663613/93‑1 (MQ=255) gTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCcccccc > 2:50519/1‑93 (MQ=255) gTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc > 1:2323738/1‑93 (MQ=255) gTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc > 1:1494510/1‑93 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGTCGCCCCg > 1:27365/1‑93 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg > 2:1043784/1‑93 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCCCCCCg > 1:4388789/1‑93 (MQ=255) atataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCgg < 1:5894381/93‑1 (MQ=255) atataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCgg > 1:2510709/1‑93 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa < 1:1540672/93‑1 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa < 1:1623705/93‑1 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa > 1:2044827/1‑93 (MQ=255) ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGGCGCCCCGGaa > 2:1158095/1‑92 (MQ=255) gaaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa < 2:2624678/92‑1 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGGCCCGGATAgcg > 2:4667299/1‑93 (MQ=255) cTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg < 2:2081904/93‑1 (MQ=255) cTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 1:1910316/1‑93 (MQ=255) ggAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg > 1:3010650/1‑93 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGGCGCCCCGGATAgcgggcgg > 1:2121639/1‑93 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggggg > 1:2089389/1‑93 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 1:2802776/1‑93 (MQ=255) gaaaaTAAAATTTAT‑CGGTGAATGGTGTCGGAAAAAAAAAGAGGAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc < 2:5294922/90‑1 (MQ=255) aaTAAATTTTATCCGGTAAATGTGGTCGA‑AAAACAAAGA‑GAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg < 2:3700918/93‑1 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCCGGGAAGGCCGCCCCCGGTAgcgggcgggcg > 1:2481497/1‑90 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa < 1:3895820/93‑1 (MQ=255) aTAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa > 1:184541/1‑93 (MQ=255) tAAAATTTATCGGGTGAATGTGGTCGA‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 1:2571908/93‑1 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGGCCCGGATAGCGGGCGGCAGaa > 2:1928185/1‑93 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 1:6012141/93‑1 (MQ=255) aaTTTATCCGGTGAATGTGTTCGA‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGa < 2:4821228/93‑1 (MQ=255) aaTTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGGGGCAgga‑gga > 1:1353787/1‑93 (MQ=255) aTTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGGAAGGGGGGGGGG‑TAATCGTGAGGGAAGGCGGCCCCCGGGAGCGGGCCGGggaa‑ggaa > 2:4919456/1‑93 (MQ=255) aTTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGGCGCCCCCGATAGCGGGGGGCGGGA‑ggga > 2:4334272/1‑91 (MQ=255) tATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCa < 1:741972/93‑1 (MQ=255) aTCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAg < 2:1777865/93‑1 (MQ=255) aTCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAg < 2:4877218/93‑1 (MQ=255) ccGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGaa > 1:1754859/1‑93 (MQ=255) ccGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGaa < 2:4885269/93‑1 (MQ=255) cGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCCGATAGCGGGCGGCAGAA‑GGAATCAGAAt > 1:2449417/1‑93 (MQ=255) cGGTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCACCCCCGGGAGCGGGGCGTCGGA‑GGAATCAGAAt > 1:338633/1‑93 (MQ=255) cGGTGAAGGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAAt < 2:2731974/93‑1 (MQ=255) ggTGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGGGGCAGAA‑GGAATCAGAAtt > 1:1435670/1‑93 (MQ=255) gTGAATGTGGTCGT‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAAttt < 1:5062256/93‑1 (MQ=255) tGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTc > 1:6191374/1‑93 (MQ=255) tGAATGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCCCCCCGGGTAGCGGGCGGCAGAA‑GGCATCAGAATTTc > 1:4791099/1‑93 (MQ=255) gAATGTGGTCGG‑AAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCa < 2:1868517/93‑1 (MQ=255) aaTGTGGTGGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCa < 2:4592662/93‑1 (MQ=255) aaTGTGGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCa > 2:442384/1‑93 (MQ=255) aTGTGGTCGG‑AAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCa < 2:6219172/93‑1 (MQ=255) tgtgGTGGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAgg < 1:3474994/93‑1 (MQ=255) tgtgGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAgg < 2:596208/93‑1 (MQ=255) tgtgGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGAGGGCGGGAGAA‑GGAAACAGAATTTCCAgg > 1:2240602/1‑93 (MQ=255) gtgGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGt < 2:6105788/93‑1 (MQ=255) gtgGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGt < 2:3213127/93‑1 (MQ=255) gtgGTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCCGGTAGCGGGCGGGCGAAGGGAATAGAAATTTCCAgt > 2:2550260/1‑92 (MQ=255) ggTGGG‑AAAAAAAAAGAGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTc < 1:1219378/93‑1 (MQ=255) gTCGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAg > 2:1267690/1‑93 (MQ=255) cGG‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGAc < 2:914900/93‑1 (MQ=255) gg‑AAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACg < 2:990503/93‑1 (MQ=255) aaaaCAAAGAGGGAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACggg > 1:1028627/1‑93 (MQ=255) aaaCAAGGGGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGc < 1:1120678/93‑1 (MQ=255) aaaCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGc < 1:1475171/93‑1 (MQ=255) aaCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCt > 2:4122372/1‑93 (MQ=255) aaCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCt < 2:3902198/93‑1 (MQ=255) aaCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCt > 1:773488/1‑93 (MQ=255) aaCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCCGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCt > 2:3569931/1‑93 (MQ=255) aaaGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGACGCCCCGGATAGCGGGCGGCAGAA‑GGGATCAGAATTTGCATGTAAGACGGGCTGCa > 2:4066919/1‑93 (MQ=255) aaGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCTGCaa < 1:5854557/93‑1 (MQ=255) agagGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAg < 2:2328125/93‑1 (MQ=255) agGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGtt < 2:5475833/93‑1 (MQ=255) | GTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGG‑AAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAA‑GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTG > NC_000913/379145‑379325 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |