BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,881,483	Δ1 bp	intergenic (‑126/‑482)	dnaA ← / → rpmH	DnaA/50S ribosomal subunit protein L34

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,881,483	0	G	.	100.0%	1261.7 / NA	273	intergenic (‑126/‑482)	dnaA/rpmH	DnaA/50S ribosomal subunit protein L34
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (148/125); total (148/125)

Only 100 of 279 total aligned reads displayed.

GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTA  >  NC_000913/3881395‑3881570

ggCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCACGA‑TCAAg                                                                                    >  1:3947363/1‑93 (MQ=255)

  cTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGAt                                                                                  <  1:5181722/93‑1 (MQ=255)

   tGAAACATTCATGATTGTTGACGTACGTCGAAAAGCCCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATc                                                                                 <  1:1715901/93‑1 (MQ=255)

   tGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGAGCGAG‑CAAGATc                                                                                 >  2:1602136/1‑93 (MQ=255)

    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  2:3590613/1‑93 (MQ=255)

     aaaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCt                                                                               >  1:782279/1‑93 (MQ=255)

     aaaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCt                                                                               >  1:3502822/1‑93 (MQ=255)

       aCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGc                                                                             >  1:5939453/1‑93 (MQ=255)

       aCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGc                                                                             <  2:691772/93‑1 (MQ=255)

       aCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGc                                                                             >  2:4118706/1‑93 (MQ=255)

        cATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCa                                                                            >  1:616158/1‑93 (MQ=255)

         aTTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaa                                                                           >  2:4849837/1‑93 (MQ=255)

          ttCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaa                                                                          >  1:5718678/1‑93 (MQ=255)

           tCATGATTGTTGACGTACTTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         <  2:3947943/93‑1 (MQ=255)

           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         <  2:2327115/93‑1 (MQ=255)

           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         <  1:1144609/93‑1 (MQ=255)

           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         <  2:463542/93‑1 (MQ=255)

           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         <  1:1982235/93‑1 (MQ=255)

            cATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGAGGTTATATGCCCGA‑TCAAGATCCTGCAAAAc                                                                        >  1:1566260/1‑93 (MQ=255)

            cATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGAGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAc                                                                        >  2:4796766/1‑93 (MQ=255)

              tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCACAACGa                                                                      >  2:5870151/1‑93 (MQ=255)

              tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGa                                                                      <  1:5389854/93‑1 (MQ=255)

               gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt                                                                     <  2:2005035/93‑1 (MQ=255)

               gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt                                                                     <  1:3925375/93‑1 (MQ=255)

                aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                    <  1:4734080/93‑1 (MQ=255)

                aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                    <  1:5338290/93‑1 (MQ=255)

                  tgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg                                                                  <  1:1399283/93‑1 (MQ=255)

                   gttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCggg                                                                 >  2:1096732/1‑93 (MQ=255)

                   gttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCggg                                                                 >  1:1861/1‑93 (MQ=255)

                     tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAc                                                               >  1:6103891/1‑93 (MQ=255)

                     tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAc                                                               <  2:2622619/93‑1 (MQ=255)

                      gACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc                                                              >  1:4213670/1‑93 (MQ=255)

                      gACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc                                                              <  1:2761313/93‑1 (MQ=255)

                       acgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcg                                                             >  2:517101/1‑93 (MQ=255)

                        cgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgc                                                            >  1:1050650/1‑93 (MQ=255)

                        cgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgc                                                            >  1:462710/1‑93 (MQ=255)

                        cgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgc                                                            <  2:5801915/93‑1 (MQ=255)

                         gtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAGcgcg                                                           >  2:1607496/1‑93 (MQ=255)

                         gtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgcg                                                           >  1:6230134/1‑93 (MQ=255)

                          tacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCgg                                                          <  2:1441174/93‑1 (MQ=255)

                           acgtCGAAAAGACCCTGCTTGAGGGGGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAGAACGATCGGGACCGCggg                                                         >  2:1171019/1‑92 (MQ=255)

                             gtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATc                                                       >  1:4865711/1‑93 (MQ=255)

                             gtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATc                                                       >  1:2209085/1‑93 (MQ=255)

                              tCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCa                                                      <  1:1383485/93‑1 (MQ=255)

                                gAAAAGCCCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    <  1:4329806/93‑1 (MQ=255)

                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    >  2:4928969/1‑93 (MQ=255)

                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    <  2:1353775/93‑1 (MQ=255)

                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    >  1:248615/1‑93 (MQ=255)

                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    <  2:556774/93‑1 (MQ=255)

                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    >  2:6102546/1‑93 (MQ=255)

                                 aaaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAg                                                   >  1:3294258/1‑93 (MQ=255)

                                  aaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGc                                                  <  1:3697862/93‑1 (MQ=255)

                                   aaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGcc                                                 >  1:3434144/1‑93 (MQ=255)

                                    aGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAGACGATCGGGACCGCGGATCATAGCCt                                                >  2:91705/1‑93 (MQ=255)

                                      gcccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaa                                              <  2:6210831/92‑1 (MQ=255)

                                       cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             >  1:2394061/1‑93 (MQ=255)

                                       cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             <  1:2889819/93‑1 (MQ=255)

                                       cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             >  2:4452378/1‑93 (MQ=255)

                                        ccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAc                                            >  2:3497392/1‑93 (MQ=255)

                                         cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt                                           >  1:2853146/1‑93 (MQ=255)

                                         cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt                                           <  2:4752799/93‑1 (MQ=255)

                                         cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt                                           <  1:3730996/93‑1 (MQ=255)

                                          tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg                                          >  2:4260333/1‑93 (MQ=255)

                                          tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg                                          >  2:2149386/1‑93 (MQ=255)

                                           gCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgc                                         >  2:2278295/1‑93 (MQ=255)

                                             ttGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcgc                                       >  2:4806702/1‑93 (MQ=255)

                                             ttGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcgc                                       >  1:4152256/1‑93 (MQ=255)

                                                  ggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAagag                                  >  1:5541504/1‑93 (MQ=255)

                                                   gTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga                                 <  1:4959142/93‑1 (MQ=255)

                                                    tGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAt                                <  1:4074443/93‑1 (MQ=255)

                                                    ggACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAt                                <  1:3819964/92‑1 (MQ=255)

                                                     gACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtc                               <  2:2690707/93‑1 (MQ=255)

                                                     gACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtc                               >  1:2336836/1‑93 (MQ=255)

                                                      aCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtct                              <  2:4332214/93‑1 (MQ=255)

                                                        gCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGACAtcttc                            <  2:5241992/93‑1 (MQ=255)

                                                         cACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttct                           <  2:3645638/93‑1 (MQ=255)

                                                          aCGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTg                          >  1:948997/1‑93 (MQ=255)

                                                           cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt                         <  1:2097849/93‑1 (MQ=255)

                                                             aaCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGttt                       <  1:2130301/93‑1 (MQ=255)

                                                              aCCGCTGTCTGCGGTTATATGCCGGA‑TCAAGATCCTGCAAAACGATAGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtc                      >  2:5073171/1‑93 (MQ=255)

                                                                cGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtctc                    >  2:569596/1‑93 (MQ=255)

                                                                 gCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTca                   >  1:3071207/1‑93 (MQ=255)

                                                                  cTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcac                  >  1:647329/1‑93 (MQ=255)

                                                                   tGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcaca                 <  2:1831027/93‑1 (MQ=255)

                                                                   tGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcaca                 >  1:4943102/1‑93 (MQ=255)

                                                                   tGTCTGCGGTTATATGCCC‑ATTAAAGATCCTGCAAACCGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTATCTcaca                 <  2:3194097/93‑1 (MQ=255)

                                                                    gTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAg                >  2:497205/1‑93 (MQ=255)

                                                                    gTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAg                >  2:5026250/1‑93 (MQ=255)

                                                                    gTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAg                >  1:5106235/1‑93 (MQ=255)

                                                                     tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa               >  2:2500096/1‑93 (MQ=255)

                                                                     tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa               <  1:1330853/93‑1 (MQ=255)

                                                                     tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa               >  2:5966572/1‑93 (MQ=255)

                                                                     tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa               >  1:2556664/1‑93 (MQ=255)

                                                                      cTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAt              >  2:1922327/1‑93 (MQ=255)

                                                                      cTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAt              >  2:6141836/1‑93 (MQ=255)

                                                                       tGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAtt             <  1:2993557/93‑1 (MQ=255)

                                                                          ggTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTc          >  2:5457889/1‑93 (MQ=255)

                                                                           gTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTcc         >  1:1238269/1‑93 (MQ=255)

                                                                                  gCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTa  >  2:2899976/1‑93 (MQ=255)

                                                                                  gCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTa  >  1:3357560/1‑93 (MQ=255)

GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTA  >  NC_000913/3881395‑3881570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`