Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 867,645 (C)8→7 coding (870/1839 nt) b0829 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913867,6380C.98.8% 741.4 / 0.3 168coding (863/1839 nt)b0829hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base . (88/77);  minor base A (1/1);  total (90/78)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 194 total aligned reads displayed.

GTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGTTTG  >  NC_000913/867546‑867729
                                                                                            |                                                                                           
gTTAGCTGCTGTTCCGCAACTTGGTGCTATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGc                                                                                             <  1:2527872/93‑1 (MQ=255)
     ctgctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccc                                                                                        <  2:2240785/93‑1 (MQ=255)
     ctgctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccc                                                                                        <  2:2027713/93‑1 (MQ=255)
     ctgctaTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccc                                                                                        <  2:4621493/93‑1 (MQ=255)
      tgctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcgccccc                                                                                       >  1:2804703/1‑93 (MQ=255)
       gctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccccca                                                                                      >  2:1186696/1‑92 (MQ=255)
       gctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccccca                                                                                      <  1:4528943/93‑2 (MQ=255)
        ctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccat                                                                                     <  1:4928897/93‑3 (MQ=255)
        ctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccat                                                                                     <  1:655894/93‑3 (MQ=255)
         tgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTGTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCGGCGAAACAGGcccccccatc                                                                                    <  1:2016752/93‑4 (MQ=255)
         tgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccatc                                                                                    >  2:5861431/1‑90 (MQ=255)
          gTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccatcg                                                                                   >  2:6056460/1‑89 (MQ=255)
          gTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccatcg                                                                                   >  1:4491060/1‑89 (MQ=255)
             ccGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGc                                                                               <  1:2071443/93‑1 (MQ=255)
             ccGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGc                                                                               <  2:17096/93‑1 (MQ=255)
             ccGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGc                                                                               >  1:1717328/1‑93 (MQ=255)
             ccGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGc                                                                               >  2:4214400/1‑93 (MQ=255)
              cGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCa                                                                              >  1:5336101/1‑93 (MQ=255)
                catcTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGa                                                                            <  1:6079834/90‑1 (MQ=255)
                 aaCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaa                                                                           >  2:446585/1‑93 (MQ=255)
                 aaCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaa                                                                           >  1:920635/1‑93 (MQ=255)
                  aCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaa                                                                          <  1:1897153/93‑1 (MQ=255)
                  aCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaa                                                                          >  1:3870803/1‑93 (MQ=255)
                  aCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaa                                                                          >  2:12476/1‑93 (MQ=255)
                   cTTGGCGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCCGCGAAACAGG‑CCCCACCATCGCGCAGaaaa                                                                         >  2:3689385/1‑93 (MQ=255)
                    ttGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAAc                                                                        >  1:484530/1‑93 (MQ=255)
                      ggTGTGATGAAAGGGTTAGATGATGCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACgg                                                                      <  1:778299/93‑1 (MQ=255)
                      ggTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACgg                                                                      >  2:4652469/1‑93 (MQ=255)
                      ggTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACgg                                                                      <  1:4387827/93‑1 (MQ=255)
                       gTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACggt                                                                     <  1:1081611/93‑1 (MQ=255)
                        tGCGATGAAATGGTTAGATTCTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACggtg                                                                    <  2:2270198/93‑1 (MQ=255)
                        tGCGATGAAAGGGTTACATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACggtg                                                                    <  2:5551795/93‑1 (MQ=255)
                             tGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGa                                                               >  1:1510333/1‑93 (MQ=255)
                             tGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGa                                                               <  1:4450875/93‑1 (MQ=255)
                              gAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGAt                                                              >  2:4437661/1‑93 (MQ=255)
                               aaaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATg                                                             <  1:5270206/93‑1 (MQ=255)
                                aaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATgg                                                            <  2:4821309/93‑1 (MQ=255)
                                aaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATgg                                                            <  2:5045750/93‑1 (MQ=255)
                                aaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATgg                                                            >  1:5434971/1‑93 (MQ=255)
                                 aGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGc                                                           <  1:5988659/93‑1 (MQ=255)
                                  gggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg                                                          <  1:4098724/93‑1 (MQ=255)
                                      tAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTTGATGGCGAAcc                                                      <  2:571930/93‑1 (MQ=255)
                                      tAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAcc                                                      <  1:5492378/93‑1 (MQ=255)
                                      tAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAcc                                                      <  1:1114211/93‑1 (MQ=255)
                                      tAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAcc                                                      <  1:1254646/93‑1 (MQ=255)
                                      tAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAcc                                                      <  1:2334164/93‑1 (MQ=255)
                                       aGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCt                                                     >  2:1784779/1‑93 (MQ=255)
                                        gATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTg                                                    >  1:4143537/1‑93 (MQ=255)
                                          ttATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtt                                                  <  2:4771292/93‑1 (MQ=255)
                                            aTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtttt                                                <  1:2708480/93‑1 (MQ=255)
                                            aTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtttt                                                >  2:2310228/1‑93 (MQ=255)
                                             tCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTa                                               >  1:1386898/1‑93 (MQ=255)
                                               cccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACg                                             >  2:3600648/1‑93 (MQ=255)
                                               cccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACA‑GACCACCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACg                                             >  1:3124476/1‑93 (MQ=255)
                                                  gACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAgg                                          >  2:2991162/1‑92 (MQ=255)
                                                  gACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGt                                          <  2:1334406/93‑1 (MQ=255)
                                                   aCGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGGGTg                                         >  2:2606169/1‑93 (MQ=255)
                                                   aCGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTg                                         <  1:4725306/93‑1 (MQ=255)
                                                     gTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑ACCCCCCATCGAGCAGACAACGGTGGTGGATGGCGTACCTGTTTTAAGAGTGCg                                       >  1:3163280/1‑93 (MQ=255)
                                                      tttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGt                                      <  1:6234243/93‑1 (MQ=255)
                                                        tCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTaa                                    <  2:1414001/93‑1 (MQ=255)
                                                        tCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTaa                                    <  2:1663532/93‑1 (MQ=255)
                                                         cccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAAt                                   >  1:4417970/1‑93 (MQ=255)
                                                         cccGGTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAAt                                   <  2:3426676/93‑1 (MQ=255)
                                                          ccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATc                                  <  2:4677433/93‑1 (MQ=255)
                                                            gTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCtt                                <  1:4802401/93‑1 (MQ=255)
                                                             ttGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTg                               >  1:4288247/1‑93 (MQ=255)
                                                             ttGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGGAATCTTg                               >  2:3486439/1‑93 (MQ=255)
                                                              tGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGt                              >  1:1052695/1‑93 (MQ=255)
                                                              tGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGt                              <  2:775560/93‑1 (MQ=255)
                                                              tGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGt                              <  1:3583532/93‑1 (MQ=255)
                                                               gATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTc                             >  1:1696313/1‑93 (MQ=255)
                                                               gATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTc                             >  2:5366886/1‑93 (MQ=255)
                                                               gATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTc                             >  2:3094722/1‑93 (MQ=255)
                                                               gATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTc                             >  2:2644838/1‑93 (MQ=255)
                                                                atatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCa                            <  1:5656131/93‑1 (MQ=255)
                                                                atatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCa                            >  1:1942439/1‑93 (MQ=255)
                                                                atatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCa                            >  1:5205558/1‑93 (MQ=255)
                                                                 tatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAc                           >  1:6033215/1‑93 (MQ=255)
                                                                 tatCGCTTGAAAATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGGGGTGGATGGCGAACCTGTTTTCCGAGTGGGTAATCTTGTCAc                           >  2:4299884/1‑93 (MQ=255)
                                                                   tCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCcccc                         >  2:1479658/1‑93 (MQ=255)
                                                                   tCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAccc                         >  2:472416/1‑93 (MQ=255)
                                                                      cTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGtt                      >  1:2304958/1‑93 (MQ=255)
                                                                      cTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGtt                      <  1:4601064/93‑1 (MQ=255)
                                                                       ttGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTGTTACGAGTGCGTAATCTTTCGACCCGttt                     >  1:3311956/1‑93 (MQ=255)
                                                                          aaCATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTccc                  <  2:1540033/93‑1 (MQ=255)
                                                                          aaCATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTccc                  <  2:2978179/93‑1 (MQ=255)
                                                                          aaCATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTccc                  <  2:3183062/93‑1 (MQ=255)
                                                                           aCATCCAGCGAAACAGG‑CCCCCCGATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAAGCTTGTCACCCGTTTCCCt                 <  2:1992594/93‑1 (MQ=255)
                                                                            cATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCtt                <  2:2437956/93‑1 (MQ=255)
                                                                             agccAGCGAAACATG‑CCCCGCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCttt               <  1:687567/91‑1 (MQ=255)
                                                                             aTCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCttt               <  2:7025/93‑1 (MQ=255)
                                                                              tCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTg              <  2:3505305/93‑1 (MQ=255)
                                                                               ccAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgc             >  1:2889347/1‑93 (MQ=255)
                                                                               ccAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgc             <  1:2784641/93‑1 (MQ=255)
                                                                                  gCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCa          <  1:302873/93‑1 (MQ=255)
                                                                                    gAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGc        >  2:3279710/1‑93 (MQ=255)
                                                                                     aaaCAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAGCCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCg       <  2:1042915/93‑1 (MQ=255)
                                                                                     aaaCAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCg       >  2:2799511/1‑93 (MQ=255)
                                                                                       aCAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGt     <  1:4652469/93‑1 (MQ=255)
                                                                                            |                                                                                           
GTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGTTTG  >  NC_000913/867546‑867729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑