BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,620,798	Δ1 bp	intergenic (+255/+186)	ydeF → / ← ydeH	putative transport protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,620,795	0	C	.	100.0%	880.9 / NA	191	intergenic (+252/+189)	ydeF/ydeH	putative transport protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (107/84); total (107/84)

Only 100 of 216 total aligned reads displayed.

CTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAT  >  NC_000913/1620703‑1620883

cTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGc                                                                                          >  1:2553498/1‑93 (MQ=255)

 tGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGcc                                                                                         >  2:378708/1‑93 (MQ=255)

      ataatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGcccttgt                                                                                    <  1:417384/93‑5 (MQ=255)

       taatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGtt                                                                                  <  1:1789232/93‑1 (MQ=255)

       taatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGtt                                                                                  >  2:694656/1‑93 (MQ=255)

           tttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAg                                                                              >  2:4662193/1‑93 (MQ=255)

           tttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAg                                                                              >  1:3651181/1‑93 (MQ=255)

            ttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGt                                                                             <  2:4740077/93‑1 (MQ=255)

             tattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGtt                                                                            <  1:3229285/93‑1 (MQ=255)

              attttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTtg                                                                           <  1:1506186/93‑1 (MQ=255)

               ttttctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTtgt                                                                          >  1:5320232/1‑93 (MQ=255)

                tttctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTtgtg                                                                         <  2:2669315/93‑1 (MQ=255)

                 ttctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTgtgt                                                                        >  1:3366543/1‑93 (MQ=255)

                  tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTa                                                                       <  2:4057477/93‑1 (MQ=255)

                  tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTa                                                                       >  2:41826/1‑93 (MQ=255)

                  tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTa                                                                       >  1:357043/1‑93 (MQ=255)

                  tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTa                                                                       <  1:584325/93‑1 (MQ=255)

                  tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTa                                                                       >  2:2597765/1‑93 (MQ=255)

                  tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTa                                                                       >  2:2111491/1‑93 (MQ=255)

                    tggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACa                                                                     <  2:2209206/93‑1 (MQ=255)

                     ggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACaa                                                                    <  2:4157317/93‑1 (MQ=255)

                     ggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACaa                                                                    >  1:80715/1‑93 (MQ=255)

                     ggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACaa                                                                    <  2:1833329/93‑1 (MQ=255)

                       ttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAgg                                                                  >  2:4992298/1‑93 (MQ=255)

                       ttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAgg                                                                  <  2:4341232/93‑1 (MQ=255)

                       ttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAgg                                                                  <  2:4607926/93‑1 (MQ=255)

                       ttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAgg                                                                  >  1:4617239/1‑93 (MQ=255)

                         ttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAgggg                                                                <  2:3736700/93‑1 (MQ=255)

                          tctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGc                                                               <  2:1197862/93‑1 (MQ=255)

                           ctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGcc                                                              <  1:5620038/93‑1 (MQ=255)

                           ctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGcc                                                              >  2:1627629/1‑93 (MQ=255)

                           ctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGcc                                                              <  1:1309220/93‑1 (MQ=255)

                            tggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGccg                                                             >  2:4886304/1‑92 (MQ=255)

                            tggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCt                                                             <  1:3420599/93‑1 (MQ=255)

                             ggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTg                                                            >  2:1696196/1‑93 (MQ=255)

                             ggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTg                                                            <  1:367725/93‑1 (MQ=255)

                               ccGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAt                                                          >  1:1054799/1‑93 (MQ=255)

                               ccGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAt                                                          <  1:1351680/93‑1 (MQ=255)

                               ccGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGGTGTGTACAAGGGGCCTGAt                                                          <  2:6116268/93‑1 (MQ=255)

                                cgcgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAtt                                                         >  1:315090/1‑93 (MQ=255)

                                 gcgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAttt                                                        >  1:3796434/1‑93 (MQ=255)

                                  cgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAtttt                                                       >  1:3060784/1‑93 (MQ=255)

                                       ttCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGa                                                  <  1:579553/93‑1 (MQ=255)

                                       ttCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGa                                                  <  2:6231923/93‑1 (MQ=255)

                                       ttCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGa                                                  <  2:1493013/93‑1 (MQ=255)

                                        tCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGAc                                                 >  2:1959047/1‑93 (MQ=255)

                                        tCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGAc                                                 <  1:4959857/93‑1 (MQ=255)

                                         cAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACg                                                <  1:5468361/93‑1 (MQ=255)

                                         cAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACg                                                >  2:1906724/1‑93 (MQ=255)

                                          aGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACgg                                               <  1:4289565/93‑1 (MQ=255)

                                           gCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGc                                              <  1:3909503/93‑1 (MQ=255)

                                           gCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGc                                              >  2:4140875/1‑93 (MQ=255)

                                           gCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGc                                              <  1:2196405/93‑1 (MQ=255)

                                               caAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaa                                          <  1:3213209/93‑1 (MQ=255)

                                                aaaTGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACCAGGGCCCTGATTTTTATGACGGCGaaaa                                         >  1:2716260/1‑93 (MQ=255)

                                                 aaTGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaa                                        >  1:2871321/1‑93 (MQ=255)

                                                  aTGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaaa                                       >  2:2516789/1‑93 (MQ=255)

                                                   tGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaaaa                                      <  1:5698147/93‑1 (MQ=255)

                                                    gggATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaaaaa                                     <  1:5164961/93‑1 (MQ=255)

                                                      gATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAAcc                                   <  1:843710/93‑1 (MQ=255)

                                                      gATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAAcc                                   >  2:656124/1‑93 (MQ=255)

                                                         gACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGcc                                >  1:2262947/1‑93 (MQ=255)

                                                           cTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAg                              <  2:586567/93‑1 (MQ=255)

                                                            tAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGt                             >  2:3321972/1‑93 (MQ=255)

                                                             aaTGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTa                            >  1:651154/1‑93 (MQ=255)

                                                              aTGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTaa                           >  1:960292/1‑93 (MQ=255)

                                                               tGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTaaa                          >  1:4556572/1‑93 (MQ=255)

                                                                   cGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcgg                      >  2:3120161/1‑93 (MQ=255)

                                                                    ggAGATAATCCCTCACCTAACCGG‑CCTTTTTTACAGTTGTGTACAAGGGGCTTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcggc                     <  1:5328294/93‑1 (MQ=255)

                                                                    ggAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcggc                     >  2:4126440/1‑93 (MQ=255)

                                                                       gaTAATCCCTCCCCT‑ACCGGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGt                  <  2:446960/93‑1 (MQ=255)

                                                                       gaTAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACACGGGGCCTGATTTTTATGACGGCGAAAAATAACCGCCAGTAAACcggcggg                  >  1:6166724/1‑92 (MQ=255)

                                                                       gaTAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAATCGCCAGTAAACcggcggg                  >  2:5504369/1‑92 (MQ=255)

                                                                         tAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGa                >  1:583164/1‑93 (MQ=255)

                                                                          aaTCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGaa               <  1:2624338/93‑1 (MQ=255)

                                                                          aaTCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGaa               <  2:5057300/93‑1 (MQ=255)

                                                                           aTCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACCGCGAAAAAAAACCGCCAGTAAAACGGCGGGGAAt              >  2:3377571/1‑93 (MQ=255)

                                                                            tCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATg             >  1:5179474/1‑93 (MQ=255)

                                                                            tCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATg             >  1:1397084/1‑93 (MQ=255)

                                                                            tCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATg             >  2:2887929/1‑93 (MQ=255)

                                                                             cccTCACCTACCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCAAAAAAAAACCGCCAGTAAACCGGCGGTGAATGc            <  2:2399395/93‑1 (MQ=255)

                                                                              ccTCACCTACCCGG‑CCTTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCt           <  2:3406747/93‑1 (MQ=255)

                                                                              ccTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCt           <  1:1824692/93‑1 (MQ=255)

                                                                               cTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCtt          <  2:5731286/93‑1 (MQ=255)

                                                                                  cccTACCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCa       <  1:3533263/92‑1 (MQ=255)

                                                                                  cccTAACCGG‑CCTTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCa       <  1:123202/92‑1 (MQ=255)

                                                                                  cccTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCAAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCa       <  2:6024873/92‑1 (MQ=255)

                                                                                  aCCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAACAACGCCAGTAAACCGGCGGTGAATGCTTGCa       >  1:2021554/1‑93 (MQ=255)

                                                                                  aCCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCa       >  1:2768087/1‑93 (MQ=255)

                                                                                  aCCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCa       <  1:1696196/93‑1 (MQ=255)

                                                                                   ccTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCAt      <  1:5974826/93‑1 (MQ=255)

                                                                                    cTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATg     >  1:3965537/1‑93 (MQ=255)

                                                                                     tAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATgg    >  1:5932004/1‑93 (MQ=255)

                                                                                     tAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATgg    >  2:5290104/1‑93 (MQ=255)

                                                                                      aaCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGTATGGa   >  2:82883/1‑93 (MQ=255)

                                                                                      aaCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGa   >  2:2930060/1‑93 (MQ=255)

                                                                                      aaCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGa   <  1:2931179/93‑1 (MQ=255)

                                                                                       aCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAt  >  2:1063876/1‑93 (MQ=255)

                                                                                       aCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAt  >  1:4405038/1‑93 (MQ=255)

                                                                                       aCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAt  <  1:2593771/93‑1 (MQ=255)

CTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAT  >  NC_000913/1620703‑1620883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`