BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,311,335	(T)_5→4	intergenic (‑566/‑173)	ompC ← / → yojN	outer membrane protein 1b (Ib;c)/putative 2‑component sensor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,311,331	0	T	.	100.0%	1015.7 / NA	218	intergenic (‑562/‑177)	ompC/yojN	outer membrane protein 1b (Ib;c)/putative 2‑component sensor protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (112/106); total (112/106)

Only 100 of 243 total aligned reads displayed.

AAAACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAAT  >  NC_000913/2311239‑2311419

 aaaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCtt                                                                                         <  1:1330583/93‑1 (MQ=255)

 aaaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCtt                                                                                         >  1:922601/1‑93 (MQ=255)

  aaCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttt                                                                                        >  2:3399217/1‑93 (MQ=255)

  aaCTATAACGCTTGTTAACTATCTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttt                                                                                        <  2:4129175/93‑1 (MQ=255)

   aCTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCtttt                                                                                       <  1:4796701/93‑1 (MQ=255)

     tataACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttttgt                                                                                     >  1:3971728/1‑91 (MQ=255)

      ataACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttttgta                                                                                    <  1:1957682/93‑4 (MQ=255)

       taACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttttgtag                                                                                   <  1:4964491/93‑5 (MQ=255)

       taACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCttttgtag                                                                                   >  1:245641/1‑89 (MQ=255)

         aCGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGt                                                                                >  1:231206/1‑93 (MQ=255)

         aCGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGt                                                                                >  1:1184790/1‑93 (MQ=255)

          cGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGtt                                                                               >  1:3813533/1‑93 (MQ=255)

           gCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTa                                                                              >  2:3426701/1‑93 (MQ=255)

            cTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAt                                                                             >  1:589604/1‑93 (MQ=255)

             ttGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAtt                                                                            >  2:1573373/1‑93 (MQ=255)

              tGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTAttt                                                                           >  1:3688006/1‑93 (MQ=255)

               gTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTg                                                                          >  1:1033382/1‑93 (MQ=255)

                 tAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTa                                                                        >  1:3573994/1‑93 (MQ=255)

                  aaCTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTAc                                                                       <  1:2649952/93‑1 (MQ=255)

                  aaCTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTAc                                                                       >  2:3882604/1‑93 (MQ=255)

                   aCTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACa                                                                      >  2:4480848/1‑93 (MQ=255)

                    cTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAg                                                                     >  2:5481528/1‑93 (MQ=255)

                       tttCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaa                                                                  <  1:1554177/93‑1 (MQ=255)

                       tttCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaa                                                                  <  2:5716515/93‑1 (MQ=255)

                       tttCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaa                                                                  >  1:380611/1‑93 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTCCAGCaaaa                                                                <  2:6125903/93‑1 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                <  2:4210133/93‑1 (MQ=255)

                         tCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCaaaa                                                                >  1:1777179/1‑93 (MQ=255)

                          cccaAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAt                                                               >  2:3973142/3‑93 (MQ=255)

                          cacaAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAt                                                               >  2:4958322/1‑93 (MQ=255)

                          cacaAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAAt                                                               >  2:6244086/1‑93 (MQ=255)

                           acaAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATg                                                              >  2:5238769/1‑93 (MQ=255)

                           acaAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATg                                                              <  1:786958/93‑1 (MQ=255)

                           acaAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATg                                                              <  1:5484448/93‑1 (MQ=255)

                            caAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATgg                                                             <  2:481407/93‑1 (MQ=255)

                             aaaTAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATgga                                                            >  2:683655/1‑92 (MQ=255)

                              aataatTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTCGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGgcg                                                           <  1:2408847/93‑1 (MQ=255)

                               ataatTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGgcgc                                                          <  2:4997175/93‑1 (MQ=255)

                               ataatTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGgcgc                                                          <  2:456066/93‑1 (MQ=255)

                               ataatTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGgcgc                                                          <  1:5714737/93‑1 (MQ=255)

                                 aatTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCtt                                                        <  2:161592/93‑1 (MQ=255)

                                      aCATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACa                                                   <  2:5020600/93‑1 (MQ=255)

                                      aCATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACa                                                   <  1:664171/93‑1 (MQ=255)

                                      aCATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACa                                                   >  1:2149405/1‑93 (MQ=255)

                                       cATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACAt                                                  >  2:4297703/1‑93 (MQ=255)

                                        aTCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATc                                                 <  1:2305416/93‑1 (MQ=255)

                                         tCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCt                                                >  1:1760515/1‑93 (MQ=255)

                                          ccGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTa                                               <  2:3278093/93‑1 (MQ=255)

                                                aaTTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGAGCTTGTACATCTTTTTccc                                         >  1:1369802/1‑93 (MQ=255)

                                                 aTTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTcccc                                        >  1:1706635/1‑93 (MQ=255)

                                                   ttCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCa                                      >  1:3485975/1‑93 (MQ=255)

                                                     ccAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAAt                                    >  1:6010472/1‑93 (MQ=255)

                                                      cAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATg                                   >  1:5277987/1‑93 (MQ=255)

                                                       aGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGc                                  >  1:2583343/1‑93 (MQ=255)

                                                          aaTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAgg                               >  1:466431/1‑93 (MQ=255)

                                                          aaTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAgg                               >  1:912997/1‑93 (MQ=255)

                                                           aTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGga                              >  1:6157913/1‑93 (MQ=255)

                                                           aTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGga                              >  1:4233233/1‑93 (MQ=255)

                                                           aTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGga                              <  1:2905831/93‑1 (MQ=255)

                                                           aTCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGga                              <  2:3146044/93‑1 (MQ=255)

                                                            tCTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGgat                             >  2:1928277/1‑93 (MQ=255)

                                                             cTTTGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGgatg                            >  1:4214644/1‑93 (MQ=255)

                                                              tttGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGgatga                           <  2:2078356/93‑1 (MQ=255)

                                                              tttGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGgatga                           >  1:3061037/1‑93 (MQ=255)

                                                              tttGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGgatga                           >  2:5608386/1‑93 (MQ=255)

                                                               ttGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGgatgat                          >  1:4770184/1‑93 (MQ=255)

                                                                tGTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATa                         <  1:436192/93‑1 (MQ=255)

                                                                 gTTTATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATaa                        >  2:3709945/1‑93 (MQ=255)

                                                                  tttATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATaaa                       >  2:4353749/1‑93 (MQ=255)

                                                                   ttATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAat                      <  2:1087591/93‑1 (MQ=255)

                                                                    tATTTGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAata                     <  2:3535467/93‑1 (MQ=255)

                                                                      tttGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATc                   <  2:5281380/93‑1 (MQ=255)

                                                                      tttGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATc                   >  1:1227100/1‑93 (MQ=255)

                                                                        tGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCAc                 <  2:591984/93‑1 (MQ=255)

                                                                        tGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCAc                 <  1:1621676/93‑1 (MQ=255)

                                                                        tGCAATTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCAc                 >  2:3834556/1‑93 (MQ=255)

                                                                           aaTTATTTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACggg              >  2:869600/1‑93 (MQ=255)

                                                                            attattTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGga             <  2:794763/93‑1 (MQ=255)

                                                                              tattTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGgaga           <  2:1505336/93‑1 (MQ=255)

                                                                               attTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGaa          <  2:4743168/93‑1 (MQ=255)

                                                                               attTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGaa          <  2:365816/93‑1 (MQ=255)

                                                                               attTTTGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGaa          >  2:1224583/1‑93 (MQ=255)

                                                                                 ttttGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATa        <  1:3396300/93‑1 (MQ=255)

                                                                                 ttttGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATa        <  2:5529505/93‑1 (MQ=255)

                                                                                  tttGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATag       <  1:551866/93‑1 (MQ=255)

                                                                                  tttGTTGGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATag       <  1:4525327/93‑1 (MQ=255)

                                                                                   ttgttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATaga      >  1:2652143/1‑93 (MQ=255)

                                                                                   ttgttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATaga      >  1:5233974/1‑93 (MQ=255)

                                                                                   ttgttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATaga      <  2:331066/93‑1 (MQ=255)

                                                                                    tgttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATagag     <  1:4331089/93‑1 (MQ=255)

                                                                                     gttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAgaga    >  2:2619923/1‑93 (MQ=255)

                                                                                     gttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAgaga    <  1:5638777/93‑1 (MQ=255)

                                                                                     gttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAgaga    >  2:1998388/1‑93 (MQ=255)

                                                                                     gttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAgaga    <  2:5387504/93‑1 (MQ=255)

                                                                                     gttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAgaga    <  2:285305/93‑1 (MQ=255)

                                                                                     gttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAgaga    <  1:3595780/93‑1 (MQ=255)

                                                                                     gttgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAgaga    >  1:3228991/1‑93 (MQ=255)

                                                                                       tgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAat  <  2:1839851/93‑1 (MQ=255)

                                                                                       tgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAat  <  1:2978204/93‑1 (MQ=255)

                                                                                       tgGGC‑TTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAat  <  1:3450751/93‑1 (MQ=255)

AAAACTATAACGCTTGTTAACTATTTCACAAATAATTAACATCCGCATAATTTCCAGCAATCTTTGTTTATTTGCAATTATTTTTGTTGGGCTTTTTGTAGGTTATTTGTACAGCAAAATGGCGCTTGTACATCTATTTCCCCCAATGCAGGATGATAAATATCACGGGAGAATAGAGAAT  >  NC_000913/2311239‑2311419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`