BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,644,603	(G)_6→5	coding (743/2313 nt)	pbpC ←	putative peptidoglycan enzyme

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,644,598	0	G	.	100.0%	935.4 / NA	203	coding (748/2313 nt)	pbpC	putative peptidoglycan enzyme
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (109/94); total (109/94)

Only 100 of 224 total aligned reads displayed.

AAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGGGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTA  >  NC_000913/2644506‑2644686

aaGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCg                                                                                          <  2:2776192/93‑1 (MQ=255)

aaGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCg                                                                                          <  1:2376670/93‑1 (MQ=255)

 aGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCgg                                                                                         <  2:2175110/93‑1 (MQ=255)

   aCCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCgggg                                                                                       >  2:4766000/1‑93 (MQ=255)

   aCCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCgggg                                                                                       >  2:343607/1‑93 (MQ=255)

       gCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCgggggcca                                                                                   >  1:4623551/1‑90 (MQ=255)

         aTCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGgccagc                                                                                >  2:1535278/1‑93 (MQ=255)

         aTCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGgccagc                                                                                >  1:1724411/1‑93 (MQ=255)

         aTCCAACGTAGGAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGgccagc                                                                                >  2:5848461/1‑93 (MQ=255)

             aaCGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGa                                                                            >  2:4285980/1‑93 (MQ=255)

             aaCGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGa                                                                            <  2:4100062/93‑1 (MQ=255)

             aaCGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCAGTTGTC‑GGGGGCCAGCCAGa                                                                            <  2:6145915/93‑1 (MQ=255)

              aCGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGAt                                                                           >  2:3989420/1‑93 (MQ=255)

              aCGTAGTAGTGATATTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGAt                                                                           <  1:3602831/93‑1 (MQ=255)

                gtagtaGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATgg                                                                         >  1:4342546/1‑93 (MQ=255)

                gtagtaGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATgg                                                                         <  1:5180858/93‑1 (MQ=255)

                gtagtaGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATgg                                                                         <  1:4738768/93‑1 (MQ=255)

                 tagtagTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATggg                                                                        <  1:3695456/93‑1 (MQ=255)

                 tagtagTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATggg                                                                        <  1:4759689/93‑1 (MQ=255)

                 tagtagTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATggg                                                                        >  2:5378412/1‑93 (MQ=255)

                 tagtagTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATggg                                                                        >  1:1051925/1‑93 (MQ=255)

                   gtagtGATTTTATCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGtt                                                                      <  1:3336315/93‑1 (MQ=255)

                      gtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGttctt                                                                   >  2:1461406/1‑93 (MQ=255)

                       tGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGttcttc                                                                  <  2:2044666/93‑1 (MQ=255)

                       tGATTTTGTCGCTTTTGCTTTTACCGAGAATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGttcttc                                                                  >  1:1283150/1‑93 (MQ=255)

                          ttttGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCt                                                               >  1:1564076/1‑93 (MQ=255)

                          ttttGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCt                                                               <  1:2000671/93‑1 (MQ=255)

                            ttGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg                                                             <  1:2320243/93‑1 (MQ=255)

                            ttGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg                                                             >  2:1153677/1‑93 (MQ=255)

                             tGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGa                                                            <  1:1609544/93‑1 (MQ=255)

                              gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGAc                                                           >  2:5082606/1‑93 (MQ=255)

                                  cttttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCtt                                                       <  1:3702627/93‑1 (MQ=255)

                                  cttttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCtt                                                       >  2:1007242/1‑93 (MQ=255)

                                   ttttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCttt                                                      >  2:2436565/1‑93 (MQ=255)

                                   ttttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCttt                                                      >  1:5740774/1‑93 (MQ=255)

                                    tttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCtttt                                                     <  1:4205523/93‑1 (MQ=255)

                                    tttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCtttt                                                     <  2:1084539/93‑1 (MQ=255)

                                     ttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTa                                                    >  2:1744005/1‑93 (MQ=255)

                                     ttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTa                                                    <  1:385441/93‑1 (MQ=255)

                                     ttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTa                                                    >  1:3158880/1‑93 (MQ=255)

                                       tcttttACCGAGCATCATGCGCGAAACCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGCCTCTTTTAcc                                                  <  1:1115084/92‑1 (MQ=255)

                                       gcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTAcc                                                  >  2:2552463/1‑93 (MQ=255)

                                       gcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTAcc                                                  >  2:2049865/1‑93 (MQ=255)

                                        cttttACCGAGCATCATGCGCGAACACAACGGAGCCAATTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCt                                                 <  2:6304528/93‑1 (MQ=255)

                                        cttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCt                                                 <  2:1879947/93‑1 (MQ=255)

                                          tttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGc                                               <  1:4078441/93‑1 (MQ=255)

                                           ttACCGAGCATCATGCGCGAAAACAGTGGTGCCAGTTGCGCCATTTG‑CCGGGTGACAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCt                                              <  2:1820258/93‑1 (MQ=255)

                                            tACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTc                                             <  2:3591231/93‑1 (MQ=255)

                                             aCCGAGCATCATGCGCGAAAACCGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCa                                            <  2:3426986/93‑1 (MQ=255)

                                             aCCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCa                                            >  1:4157948/1‑93 (MQ=255)

                                             aCCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCa                                            <  2:3060331/93‑1 (MQ=255)

                                               cGAGCATCATGCGCTAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGTTTCTTCCCTTGACTCTTTTACCTGCTCACg                                          <  2:3739431/93‑1 (MQ=255)

                                               cGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg                                          >  2:5065383/1‑93 (MQ=255)

                                               cGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg                                          >  2:6287501/1‑93 (MQ=255)

                                                gAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACgg                                         >  2:3897546/1‑93 (MQ=255)

                                                gAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACgg                                         >  1:6047923/1‑93 (MQ=255)

                                                gAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCGGCTCACgg                                         <  2:6129373/93‑1 (MQ=255)

                                                 aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACggg                                        >  1:2742865/1‑93 (MQ=255)

                                                  gCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGa                                       <  1:5238455/93‑1 (MQ=255)

                                                   catcatGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGAc                                      >  1:1812352/1‑93 (MQ=255)

                                                    atcatGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGAcc                                     >  1:5350839/1‑93 (MQ=255)

                                                    atcatGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGAcc                                     <  2:1655472/93‑1 (MQ=255)

                                                     tcatGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACca                                    >  2:3595862/1‑93 (MQ=255)

                                                     tcatGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACca                                    >  2:562571/1‑93 (MQ=255)

                                                     tcatGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACca                                    <  2:3359527/93‑1 (MQ=255)

                                                      catGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcac                                   <  1:2481120/93‑1 (MQ=255)

                                                      catGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcac                                   <  1:2125934/93‑1 (MQ=255)

                                                       atGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcaca                                  >  2:211533/1‑93 (MQ=255)

                                                        tGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacac                                 <  2:5330749/93‑1 (MQ=255)

                                                        tGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacac                                 >  2:2919555/1‑93 (MQ=255)

                                                         gcgcGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacaca                                >  2:625515/1‑93 (MQ=255)

                                                           gcgAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACAcc                              >  2:5123682/1‑93 (MQ=255)

                                                            cgAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCt                             <  1:1004190/93‑1 (MQ=255)

                                                             gAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCtt                            >  1:4437385/1‑93 (MQ=255)

                                                              aaaaCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGCCCTTTTTACTTGCTCCCGGACCCACACCCCttc                           >  1:2672260/1‑92 (MQ=255)

                                                               aagcAGCGGTGCCAGTTGCGGCATGTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGc                          <  2:4173683/90‑1 (MQ=255)

                                                               aaaCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGc                          <  2:16961/93‑1 (MQ=255)

                                                                 aCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCAc                        >  2:5528089/1‑93 (MQ=255)

                                                                 aCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCAc                        <  2:4534786/93‑1 (MQ=255)

                                                                     cGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGcc                    <  1:4506790/93‑1 (MQ=255)

                                                                     cGGTGCCAGTTGCGACATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGcc                    <  1:5474576/93‑1 (MQ=255)

                                                                       gTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCAt                  >  2:4349928/1‑93 (MQ=255)

                                                                        tGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATc                 <  1:5497767/93‑1 (MQ=255)

                                                                         gCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTAACGGGACCACACACCTTGCACGGCCATcc                >  2:6187689/1‑93 (MQ=255)

                                                                          ccAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCg               <  2:4118863/93‑1 (MQ=255)

                                                                            aGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGtt             <  1:5017918/93‑1 (MQ=255)

                                                                             gTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTCCCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTc            <  2:1984537/93‑1 (MQ=255)

                                                                             gTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTc            >  2:783633/1‑93 (MQ=255)

                                                                             gTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTc            >  1:3822828/1‑93 (MQ=255)

                                                                              ttGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCg           >  1:371510/1‑93 (MQ=255)

                                                                              ttGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGCTCg           >  2:2628213/1‑93 (MQ=255)

                                                                               tGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa          <  1:746673/93‑1 (MQ=255)

                                                                                   gCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCAc      >  1:1412767/1‑93 (MQ=255)

                                                                                    cATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACt     >  2:1270261/1‑93 (MQ=255)

                                                                                     aTTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCCCGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACtt    >  2:2666620/1‑93 (MQ=255)

                                                                                     aTTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACtt    >  1:6253748/1‑93 (MQ=255)

                                                                                     aTTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACtt    >  1:2864928/1‑93 (MQ=255)

                                                                                      tttGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACttt   >  2:1601644/1‑93 (MQ=255)

                                                                                      tttGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACttt   >  1:2992073/1‑93 (MQ=255)

                                                                                      tttGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACttt   >  1:3273799/1‑93 (MQ=255)

AAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGGGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTA  >  NC_000913/2644506‑2644686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`