BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,812,859	Δ1 bp	intergenic (‑105/+46)	ygaG ← / ← gshA	hypothetical protein/gamma‑glutamate‑cysteine ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,812,858	0	C	.	100.0%	894.0 / NA	193	intergenic (‑104/+47)	ygaG/gshA	hypothetical protein/gamma‑glutamate‑cysteine ligase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (119/74); total (119/74)

Only 100 of 203 total aligned reads displayed.

CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATC  >  NC_000913/2812766‑2812946

cGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTc                                                                                          >  1:3397600/1‑93 (MQ=255)

 ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTca                                                                                         >  1:2722939/1‑92 (MQ=255)

 ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTca                                                                                         >  1:5714551/1‑92 (MQ=255)

 ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTca                                                                                         <  2:5727847/93‑2 (MQ=255)

 ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTca                                                                                         <  2:5890022/93‑2 (MQ=255)

   tAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcaga                                                                                       >  2:1276336/1‑90 (MQ=255)

   tAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcaga                                                                                       >  2:6275417/1‑90 (MQ=255)

    aaTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcagag                                                                                      >  1:860970/1‑89 (MQ=255)

     aTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAgaga                                                                                    >  2:1931058/1‑93 (MQ=255)

      tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAt                                                                                   >  2:2084252/1‑93 (MQ=255)

      tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGAt                                                                                   >  2:2928766/1‑93 (MQ=255)

          tttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGaaa                                                                               >  2:1858552/1‑93 (MQ=255)

            tAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAtt                                                                             <  1:1718058/93‑1 (MQ=255)

            tAAAAATGTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAAtt                                                                             >  2:5101562/1‑93 (MQ=255)

                 aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGc                                                                        <  2:4948566/93‑1 (MQ=255)

                 aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGc                                                                        <  1:4935933/93‑1 (MQ=255)

                  ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc                                                                       >  1:1584822/1‑93 (MQ=255)

                  ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc                                                                       >  2:2176159/1‑93 (MQ=255)

                  ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc                                                                       >  2:724349/1‑93 (MQ=255)

                  ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc                                                                       >  2:392130/1‑93 (MQ=255)

                  ttttCTGAACTCTATCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGcc                                                                       <  1:3605366/93‑1 (MQ=255)

                      cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTc                                                                   <  2:3100336/93‑1 (MQ=255)

                       tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                                  >  1:1649344/1‑93 (MQ=255)

                       tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                                  >  1:3046484/1‑93 (MQ=255)

                       tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                                  <  1:3976417/93‑1 (MQ=255)

                        gAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc                                                                 <  1:4730183/93‑1 (MQ=255)

                        gAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc                                                                 <  1:4968125/93‑1 (MQ=255)

                        gAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc                                                                 >  1:2829364/1‑93 (MQ=255)

                        gAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc                                                                 <  2:4474221/93‑1 (MQ=255)

                        gAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCAc                                                                 >  2:4584619/1‑93 (MQ=255)

                         aaCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACg                                                                >  2:3142761/1‑93 (MQ=255)

                         aaCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACg                                                                >  1:1282612/1‑93 (MQ=255)

                         aaCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACg                                                                <  1:5425589/93‑1 (MQ=255)

                          aCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGa                                                               >  1:2295476/1‑93 (MQ=255)

                           ctctTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAg                                                              <  2:33911/93‑1 (MQ=255)

                           ctctTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAg                                                              <  1:4113950/93‑1 (MQ=255)

                           ctctTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAg                                                              >  2:3955624/1‑93 (MQ=255)

                            tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt                                                             >  1:2028813/1‑93 (MQ=255)

                            tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt                                                             <  2:860863/93‑1 (MQ=255)

                             ctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTg                                                            <  1:4055500/93‑1 (MQ=255)

                             ctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTg                                                            <  2:650338/93‑1 (MQ=255)

                               ttcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGc                                                          >  1:1234263/1‑93 (MQ=255)

                                  ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                                       >  1:2376357/1‑93 (MQ=255)

                                  ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                                       <  1:3299730/93‑1 (MQ=255)

                                  ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                                       >  1:652450/1‑93 (MQ=255)

                                  ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                                       >  2:1197498/1‑93 (MQ=255)

                                   tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGACATTTTGGCCACTCACGAGTGGGCttt                                                      >  2:68494/1‑93 (MQ=255)

                                   tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttt                                                      >  1:293758/1‑93 (MQ=255)

                                     ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttttt                                                    >  2:5441981/1‑93 (MQ=255)

                                     ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttttt                                                    >  1:2496544/1‑93 (MQ=255)

                                     ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttttt                                                    <  2:5206578/93‑1 (MQ=255)

                                     ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttttt                                                    >  2:1761476/1‑93 (MQ=255)

                                     ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttttt                                                    >  2:1170111/1‑93 (MQ=255)

                                      cAGGCGAGACTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGCTGAAATTTTGGCCACTCACGAGTGGCCTttttc                                                   >  2:2971011/1‑93 (MQ=255)

                                        ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctt                                                 >  1:5842377/1‑93 (MQ=255)

                                            aGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTtttcttttct                                             >  2:5263264/1‑93 (MQ=255)

                                             gTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTg                                            <  1:2492131/93‑1 (MQ=255)

                                              tCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGt                                           >  1:5157184/1‑93 (MQ=255)

                                                tGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCa                                         >  2:1577608/1‑93 (MQ=255)

                                                  aGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAgg                                       <  1:3690727/93‑1 (MQ=255)

                                                   gTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc                                      >  1:173079/1‑93 (MQ=255)

                                                   gTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc                                      >  2:153029/1‑93 (MQ=255)

                                                   gTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc                                      >  1:1431242/1‑93 (MQ=255)

                                                     atatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGCAATTTTGGCCACTCACGAGCGGCCTTTTTCTTTTCTGTCAGGCgt                                    >  1:3074194/1‑93 (MQ=255)

                                                     atatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgt                                    >  1:4799221/1‑93 (MQ=255)

                                                     atatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgt                                    >  2:4127401/1‑93 (MQ=255)

                                                      tatGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtg                                   >  1:5125975/1‑93 (MQ=255)

                                                       atGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtgt                                  >  1:2255505/1‑93 (MQ=255)

                                                       atGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtgt                                  <  2:296166/93‑1 (MQ=255)

                                                        tGAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtt                                 <  2:4181805/93‑1 (MQ=255)

                                                         gAAAGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttt                                >  1:3986835/1‑93 (MQ=255)

                                                          aaaGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtttt                               <  1:6051492/93‑1 (MQ=255)

                                                          aaaGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtttt                               >  2:1036898/1‑93 (MQ=255)

                                                           aaGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                              >  1:5190756/1‑93 (MQ=255)

                                                           aaGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                              <  2:2810163/93‑1 (MQ=255)

                                                            aGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTc                             >  2:5699720/1‑93 (MQ=255)

                                                            aGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTc                             >  2:1647195/1‑93 (MQ=255)

                                                             gACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTcc                            <  1:4189420/93‑1 (MQ=255)

                                                              aCGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCa                           <  2:6258172/93‑1 (MQ=255)

                                                                  gcATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCca                       >  2:1690782/1‑93 (MQ=255)

                                                                    aTTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcaca                     >  2:142444/1‑93 (MQ=255)

                                                                       tGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCg                  >  1:6078278/1‑93 (MQ=255)

                                                                       tGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCg                  >  1:1802045/1‑93 (MQ=255)

                                                                        gTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGc                 >  1:6223323/1‑93 (MQ=255)

                                                                          tATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCATTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACCCCGCaa               >  1:2579185/1‑93 (MQ=255)

                                                                            tcatcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc             >  2:2661535/1‑93 (MQ=255)

                                                                            tcatcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc             >  2:114744/1‑93 (MQ=255)

                                                                              atcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACgg           <  2:4337497/93‑1 (MQ=255)

                                                                               tcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGt          >  2:2576899/1‑93 (MQ=255)

                                                                               tcatcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGt          >  1:1990951/1‑93 (MQ=255)

                                                                                catcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGtt         <  2:5519460/93‑1 (MQ=255)

                                                                                 atcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTc        <  1:4312105/93‑1 (MQ=255)

                                                                                 atcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTc        >  1:771274/1‑93 (MQ=255)

                                                                                 atcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTc        >  1:5347175/1‑93 (MQ=255)

                                                                                  tcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCg       <  1:1041209/93‑1 (MQ=255)

                                                                                  tcCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCg       <  2:4799221/93‑1 (MQ=255)

                                                                                    ccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt     >  1:2448858/1‑93 (MQ=255)

                                                                                    ccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt     >  1:1303136/1‑93 (MQ=255)

                                                                                    ccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGCGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt     >  1:5297717/1‑93 (MQ=255)

                                                                                      tGAATT‑CAGAGATTAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGCTCGGTAt   >  2:4200945/1‑93 (MQ=255)

CGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATC  >  NC_000913/2812766‑2812946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`