BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,951,168	+G	coding (37/1818 nt)	ilvD →	dihydroxyacid dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,951,168	1	.	G	100.0%	438.4 / NA	137	P13A (CCC→GCC)	ilvD	dihydroxyacid dehydratase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (17/120); total (17/120)

Only 100 of 160 total aligned reads displayed.

GGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑G‑GC‑C‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951087‑3951248

ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGaa                                                                          <  2:558541/93‑1 (MQ=255)

 gAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAAt                                                                         <  2:4428060/93‑1 (MQ=255)

  aGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATg                                                                        <  1:1863299/93‑1 (MQ=255)

    taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGAc                                                                      <  1:4244729/93‑1 (MQ=255)

    taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGAc                                                                      <  2:1237634/93‑1 (MQ=255)

    taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGAc                                                                      <  2:1208837/93‑1 (MQ=255)

    taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGAc                                                                      <  1:2409744/93‑1 (MQ=255)

     aaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGAcc                                                                     <  2:4815837/93‑1 (MQ=255)

      aataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATCTGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCg                                                                    <  1:3385934/93‑1 (MQ=255)

      aataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCg                                                                    <  2:1010860/93‑1 (MQ=255)

      aataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCg                                                                    <  2:1565934/93‑1 (MQ=255)

       ataaaGTATGCCTAAGTCCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGa                                                                   <  1:3482414/93‑1 (MQ=255)

        taaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGAc                                                                  <  1:1049559/93‑1 (MQ=255)

        taaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGAc                                                                  <  2:1909196/93‑1 (MQ=255)

         aaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACg                                                                 <  1:653582/93‑1 (MQ=255)

           aGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGcc                                                               <  2:3786077/93‑1 (MQ=255)

             tATGCCTAAGTACCGTTCCGCCAGCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑a                                                            <  2:2069836/93‑1 (MQ=255)

               tGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑Att                                                          <  2:432911/93‑1 (MQ=255)

               tGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCCGT‑G‑‑GCGCGC‑‑CCCCCGCAAGACCGACGccccct                                                           >  2:5175879/1‑89 (MQ=255)

                gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑Attt                                                         <  1:4879426/93‑1 (MQ=255)

                 ccTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTc                                                        <  1:2665552/93‑1 (MQ=255)

                  cTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCg                                                       <  1:2242642/93‑1 (MQ=255)

                  cTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCg                                                       <  1:1080363/93‑1 (MQ=255)

                   tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCgg                                                      <  1:1620586/93‑1 (MQ=255)

                   tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGT‑GGTG‑GG‑C‑‑CACCCGCATGACCCACGCCC‑Atttttg                                                      >  2:3419926/1‑90 (MQ=255)

                    aaGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGt                                                     <  1:1913452/93‑1 (MQ=255)

                    aaGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGTGG‑‑G‑GCGC‑‑CCCCCCGATGACCGACGCCG‑CTTTTGGt                                                     >  1:4603640/1‑93 (MQ=255)

                     aGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTa                                                    <  2:5333146/93‑1 (MQ=255)

                      gTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTaa                                                   <  2:3142506/93‑1 (MQ=255)

                      gTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CCCCCGGATGAACGACCCCG‑ACTTTGGTaa                                                   >  2:3191533/1‑93 (MQ=255)

                       tACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAg                                                  <  2:3786723/93‑1 (MQ=255)

                         ccGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGcc                                                <  2:1355232/93‑1 (MQ=255)

                         ccGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGcc                                                <  2:6229255/93‑1 (MQ=255)

                            ttCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGAt                                             <  1:3213782/93‑1 (MQ=255)

                            ttCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGGGCGCTGT‑G‑‑GCGCGC‑‑CCCCGGGATGACCGACACCG‑ATTTTTGTAAGCCGAt                                             >  2:5365309/1‑93 (MQ=255)

                            ttCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCCTGGGCTGG‑GGCG‑GG‑G‑‑CACCGGAATGACCGCCGCCG‑CTTTGTGGAAGGCGAt                                             >  1:1354609/1‑93 (MQ=255)

                             tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGAtt                                            <  1:5453372/93‑1 (MQ=255)

                              ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTa                                           <  2:4707260/93‑1 (MQ=255)

                              ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTa                                           <  1:5522790/93‑1 (MQ=255)

                              ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTa                                           <  1:2677246/93‑1 (MQ=255)

                              ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTa                                           <  2:5474787/93‑1 (MQ=255)

                               cGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGCGGGGTGTGG‑‑G‑GCGC‑‑CACCCGGATGGGCGAGCCCC‑ATTTCCGGAAGCCGCTTAt                                          >  2:5615630/1‑93 (MQ=255)

                                gCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCTATTATc                                         <  2:5240943/93‑1 (MQ=255)

                                gCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATc                                         <  1:4189553/93‑1 (MQ=255)

                                cccaccaccaCTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATc                                         <  1:5257367/92‑1 (MQ=255)

                                 ccaccaccaCTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGT‑G‑‑G‑GG‑CGGCCCCGGGATGGCCGACGCCG‑GTTTTGGTGAGCCGGtttttg                                        >  2:2162329/1‑89 (MQ=255)

                                  caccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATcgc                                       <  1:477011/93‑1 (MQ=255)

                                  caccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATcgc                                       <  1:330334/93‑1 (MQ=255)

                                  caccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATcgc                                       <  2:1342560/93‑1 (MQ=255)

                                  caccaccacTCATGGTCGTAATATGGCGGGGGCTCGTGCGCCGT‑G‑‑GCGCGC‑‑CCCCCGGATGAGCGACGCCG‑GTTTTTGTAAGCCCATTATtgc                                       >  2:5867941/1‑93 (MQ=255)

                                     caccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGt                                    <  1:360541/93‑1 (MQ=255)

                                      accacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGtt                                   <  1:6174305/93‑1 (MQ=255)

                                       ccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTtg                                  <  1:1067817/93‑1 (MQ=255)

                                       ccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTtg                                  <  1:6015153/93‑1 (MQ=255)

                                         acTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTGT‑G‑‑G‑GG‑CGGCACCGGGATGAACCACGCCC‑AGTTTGGGAAGACGACTATCGCGGGtgtg                                >  2:584308/1‑93 (MQ=255)

                                          cTCATGGTCGTAATATGGCGGGTGCTCGTGCGCCGT‑G‑‑GCGCGG‑‑CCCCCGAATGACCGACCCCGCATTTC‑GTAAGCCGAATATTGCGGGTTTGa                               >  2:1028633/1‑93 (MQ=255)

                                           tCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGT‑GGCG‑GG‑G‑‑CACCAGGAAGACCGACGCCG‑ATTTTGGTAAGGCGATTATTGCGGGtgtgga                              >  2:5075296/1‑91 (MQ=255)

                                             aTGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACt                            <  1:5977519/93‑1 (MQ=255)

                                              tGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTc                           <  2:1522853/93‑1 (MQ=255)

                                              tGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTc                           <  1:1803526/93‑1 (MQ=255)

                                               ggTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCg                          <  2:5000778/93‑1 (MQ=255)

                                                 tCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGtt                        <  2:4144774/93‑1 (MQ=255)

                                                  cGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTc                       <  2:5946509/93‑1 (MQ=255)

                                                  cGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTc                       <  1:1730530/93‑1 (MQ=255)

                                                  cGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTc                       <  1:3804710/93‑1 (MQ=255)

                                                    tAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAc                     <  2:6093264/93‑1 (MQ=255)

                                                       tatGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCa                  >  2:2293983/1‑93 (MQ=255)

                                                       tatGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGGTGTGAAATCGTTCACCCa                  >  2:263914/1‑93 (MQ=255)

                                                        atGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCaa                 <  2:3952862/93‑1 (MQ=255)

                                                         tGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  2:232907/93‑1 (MQ=255)

                                                         tGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  1:3914146/93‑1 (MQ=255)

                                                         tGGCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  1:5558079/93‑1 (MQ=255)

                                                          ggCGGGTGCTCGTGCGCTGTGG‑‑G‑GCGC‑‑CACCGGAATGACCGACCCCG‑CTTTCGGTAAGCCGATTATCGCGGGTGTGAACTCGTTCACCCACtt               >  2:4160641/1‑93 (MQ=255)

                                                          ggCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               <  2:1392455/93‑1 (MQ=255)

                                                           gCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAttt              <  1:5365738/93‑1 (MQ=255)

                                                           gCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAttt              <  2:4831528/93‑1 (MQ=255)

                                                           gCGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAttt              >  2:3136331/1‑93 (MQ=255)

                                                            cGGGTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg             <  2:5961091/93‑1 (MQ=255)

                                                              ggTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           <  1:5449555/93‑1 (MQ=255)

                                                              ggTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           <  1:5868102/93‑1 (MQ=255)

                                                              ggTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           <  2:5014051/93‑1 (MQ=255)

                                                              ggTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           <  1:2125318/93‑1 (MQ=255)

                                                               gTGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  1:590840/93‑1 (MQ=255)

                                                                tGCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         <  2:347891/93‑1 (MQ=255)

                                                                 gCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        >  2:3579671/1‑93 (MQ=255)

                                                                 gCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        <  1:637234/93‑1 (MQ=255)

                                                                 gCTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGAAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        <  2:1041646/93‑1 (MQ=255)

                                                                  cTCGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCgg       <  2:5822362/93‑1 (MQ=255)

                                                                    cGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     >  2:818985/1‑93 (MQ=255)

                                                                    cGTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     >  2:1938179/1‑93 (MQ=255)

                                                                     gTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  1:2009633/93‑1 (MQ=255)

                                                                     gTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  2:2399186/93‑1 (MQ=255)

                                                                     gTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    >  1:5796044/1‑93 (MQ=255)

                                                                     gTGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  1:5636447/93‑1 (MQ=255)

                                                                      tGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa   <  1:3526804/93‑1 (MQ=255)

                                                                      tGCGCTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa   >  2:3577504/1‑93 (MQ=255)

                                                                       gcgcTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  1:1792949/93‑1 (MQ=255)

                                                                       gcgcTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  1:2941079/93‑1 (MQ=255)

                                                                       gcgcTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  >  1:3011111/1‑93 (MQ=255)

                                                                       gcgcTGT‑G‑‑GCGCGC‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  1:1107427/93‑1 (MQ=255)

GGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑G‑‑G‑GC‑C‑‑CACCGGAATGACCGACGCCG‑ATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951087‑3951248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`