BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,525	+G	intergenic (+92/‑141)	b4555 → / → yigM	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,524	1	.	G	100.0%	835.3 / NA	253	intergenic (+91/‑142)	b4555/yigM	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (115/138); total (115/138)

Only 100 of 274 total aligned reads displayed.

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑A‑AA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT  >  NC_000913/4008434‑4008611

  ggATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑gg                                                                                       >  2:4893182/1‑92 (MQ=255)

    aTGAACGACGCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑ggaa                                                                                     <  2:711517/93‑4 (MQ=255)

     tGAACGACGCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑ggaag                                                                                    >  1:3579576/1‑89 (MQ=255)

     tGAACGACGCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑ggaag                                                                                    <  1:2003960/93‑5 (MQ=255)

        acgacgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGa                                                                                  >  2:1913156/1‑93 (MQ=255)

          gacgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGAtt                                                                                <  1:5994215/93‑1 (MQ=255)

          gacgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGAtt                                                                                <  1:4825751/93‑1 (MQ=255)

          gacgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGAtt                                                                                <  2:5755891/93‑1 (MQ=255)

          gacgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGAtt                                                                                >  2:5321920/1‑93 (MQ=255)

          gacgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGAtt                                                                                <  1:236131/93‑1 (MQ=255)

           acgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTg                                                                               >  2:435163/1‑93 (MQ=255)

           acgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTg                                                                               >  1:313866/1‑93 (MQ=255)

           acgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTg                                                                               >  1:709619/1‑93 (MQ=255)

           acgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTg                                                                               <  1:557163/93‑1 (MQ=255)

            cgCCGAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTgg                                                                              <  1:3880175/93‑1 (MQ=255)

                gAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACt                                                                          >  2:5116289/1‑93 (MQ=255)

                gAAATGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACt                                                                          >  2:1499851/1‑93 (MQ=255)

                 aaaTGCTTTCAATGGC‑GGGTA‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTACATCCCGAGC‑TGGAAGTGATTGGTACTa                                                                         <  2:1426094/93‑1 (MQ=255)

                 aaaTGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTa                                                                         <  1:2326490/93‑1 (MQ=255)

                   aTGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAAt                                                                       >  1:973721/1‑93 (MQ=255)

                   aTGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAAt                                                                       >  1:1059838/1‑93 (MQ=255)

                   aTGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAAt                                                                       <  2:2585033/93‑1 (MQ=255)

                   aTGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAAt                                                                       <  1:5931535/93‑1 (MQ=255)

                   aTGCTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAAt                                                                       <  1:1385819/93‑1 (MQ=255)

                      cTGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGcc                                                                    <  2:3390358/93‑1 (MQ=255)

                       tGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcg                                                                   >  1:3608394/1‑93 (MQ=255)

                       tGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcg                                                                   >  2:5867509/1‑93 (MQ=255)

                       tGTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAAGGCcg                                                                   >  2:2157613/1‑93 (MQ=255)

                        gTCGATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcga                                                                  <  1:5429391/93‑1 (MQ=255)

                         tCGGTGGCGGGG‑A‑AAGGCTGCATGATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGC‑TGGAAGTGATTGGTACTAATGCcgac                                                                 <  2:4782770/93‑1 (MQ=255)

                         tCGATGGCGGGG‑ATAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgac                                                                 <  1:2163614/93‑1 (MQ=255)

                           gATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgacga                                                               <  2:3320626/93‑1 (MQ=255)

                           gATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgacga                                                               >  1:3224733/1‑93 (MQ=255)

                           gATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgacga                                                               <  1:1526869/93‑1 (MQ=255)

                           gATGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCcgacga                                                               >  2:447040/1‑93 (MQ=255)

                            aTGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCgacgac                                                              <  2:299140/93‑1 (MQ=255)

                            aTGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCgacgac                                                              >  1:6233158/1‑93 (MQ=255)

                            aTGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCgacgac                                                              >  1:3021932/1‑93 (MQ=255)

                            aTGGCGGGG‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCgacgac                                                              <  1:3621465/93‑1 (MQ=255)

                              ggcgggg‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGAcgc                                                            <  1:3394054/89‑1 (MQ=255)

                                cgggg‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCgg                                                          <  2:2279895/91‑1 (MQ=255)

                                 gggg‑A‑AAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGt                                                         <  2:4813315/92‑1 (MQ=255)

                                       aaaggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCg                                                     >  2:24439/5‑93 (MQ=255)

                                       aaaggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCg                                                     >  1:4072682/5‑93 (MQ=255)

                                           gCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAtt                                                 <  1:630739/93‑1 (MQ=255)

                                             tGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt                                               >  2:2902787/1‑93 (MQ=255)

                                             tGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt                                               <  1:5314336/93‑1 (MQ=255)

                                             tGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt                                               >  2:4751751/1‑93 (MQ=255)

                                              gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              <  2:3735542/93‑1 (MQ=255)

                                              gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              >  2:4823035/1‑93 (MQ=255)

                                               cATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCt                                             >  1:3558485/1‑93 (MQ=255)

                                               cATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCt                                             <  1:2069627/93‑1 (MQ=255)

                                                aTTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTg                                            <  2:5244410/93‑1 (MQ=255)

                                                 ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc                                           >  2:1117824/1‑93 (MQ=255)

                                                 ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc                                           >  2:1550013/1‑93 (MQ=255)

                                                       gCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAc                                     <  2:1704532/93‑1 (MQ=255)

                                                           tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 <  2:2474435/89‑1 (MQ=255)

                                                           tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 <  2:567274/89‑1 (MQ=255)

                                                           ggcgcaccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 <  2:4321172/89‑1 (MQ=255)

                                                            gcgcaccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAt                                <  1:4455718/90‑1 (MQ=255)

                                                             cgcaccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAtt                               <  2:5165655/91‑1 (MQ=255)

                                                             cgcaccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAtt                               <  1:1221663/91‑1 (MQ=255)

                                                               caccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             <  2:773125/93‑1 (MQ=255)

                                                               caccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             >  1:4399031/1‑93 (MQ=255)

                                                                accaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAt                            <  1:435163/93‑1 (MQ=255)

                                                                accaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAt                            >  2:4084289/1‑93 (MQ=255)

                                                                 ccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATc                           <  1:2784437/93‑1 (MQ=255)

                                                                 ccaGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATc                           >  1:1622908/1‑93 (MQ=255)

                                                                  caGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCg                          <  1:5655866/93‑1 (MQ=255)

                                                                   aGCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGt                         >  1:1005927/1‑93 (MQ=255)

                                                                    gCGTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGATGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTa                        <  1:4565446/93‑1 (MQ=255)

                                                                      ggttGAAAGGCCTTCAACCCGAGCTT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAt                      <  2:2669509/90‑1 (MQ=255)

                                                                      gTCTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAt                      <  1:3802397/93‑1 (MQ=255)

                                                                        cTGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCg                    <  2:5995372/93‑1 (MQ=255)

                                                                         tGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGt                   >  2:5367660/1‑93 (MQ=255)

                                                                         tGAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGt                   >  1:4254051/1‑93 (MQ=255)

                                                                          gAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGtt                  >  2:6231504/1‑93 (MQ=255)

                                                                          gAAAGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGtt                  >  2:4961910/1‑93 (MQ=255)

                                                                           aaaGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGttt                 >  1:2241548/1‑92 (MQ=255)

                                                                           aaaGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTc                 >  1:2031862/1‑93 (MQ=255)

                                                                           aaaGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTc                 <  1:476989/93‑1 (MQ=255)

                                                                            aaGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCt                <  2:4242722/93‑1 (MQ=255)

                                                                            aaGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCt                >  1:4642967/1‑93 (MQ=255)

                                                                             aGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCtt               <  1:2719676/93‑1 (MQ=255)

                                                                             aGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCtt               >  1:5097459/1‑93 (MQ=255)

                                                                             aGACCTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCtt               >  2:3951644/1‑93 (MQ=255)

                                                                                ccTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAt            <  1:6136331/93‑1 (MQ=255)

                                                                                ccTTCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAt            >  2:5725416/1‑93 (MQ=255)

                                                                                  ttCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAttt          <  1:3311356/93‑1 (MQ=255)

                                                                                  ttCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATATGCGTAAACTCTATTTATCGTAATAGTTCTTTAttt          >  2:1306983/1‑93 (MQ=255)

                                                                                   tCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTg         <  1:2686103/93‑1 (MQ=255)

                                                                                   tCATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTg         <  2:3993000/93‑1 (MQ=255)

                                                                                    cATCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTgg        >  2:6056055/1‑93 (MQ=255)

                                                                                     aTCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGt       <  2:3118034/93‑1 (MQ=255)

                                                                                     aTCCCGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGt       >  1:3565092/1‑93 (MQ=255)

                                                                                       cccGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     <  1:2607369/93‑1 (MQ=255)

                                                                                       cccGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     <  2:2805867/93‑1 (MQ=255)

                                                                                        ccGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAg    <  1:3039416/93‑1 (MQ=255)

                                                                                         cGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGt   <  1:4095449/93‑1 (MQ=255)

                                                                                         cGAGC‑TGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGt   >  1:5688908/1‑93 (MQ=255)

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑A‑AA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGC‑T‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT  >  NC_000913/4008434‑4008611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`