Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,502,304 (T)5→6 coding (679/1218 nt) b4279 → putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,502,2991.T99.6% 845.1 / ‑4.8 226C225F (TGT→TTT) b4279putative transport protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  major base T (118/107);  minor base A (1/0);  total (119/107)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 248 total aligned reads displayed.

GTGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTC  >  NC_000913/4502207‑4502386
                                                                                             |                                                                                       
gTGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTg                                                                                          >  1:825616/1‑93 (MQ=255)
 tGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGt                                                                                        >  1:2724281/1‑93 (MQ=255)
 tGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGt                                                                                        <  1:3728506/93‑1 (MQ=255)
  ggATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGtt                                                                                       >  1:1561172/1‑93 (MQ=255)
   gATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGttt                                                                                      >  1:6153056/1‑93 (MQ=255)
    aTTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGtttt                                                                                     >  1:772866/1‑93 (MQ=255)
       gAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGttttttg                                                                                  >  1:5490305/1‑91 (MQ=255)
       gAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGttttttg                                                                                  >  2:3460968/1‑91 (MQ=255)
       gAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGttttttg                                                                                  <  1:721606/93‑3 (MQ=255)
           aTAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTa                                                                               <  1:184260/93‑1 (MQ=255)
           aTAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTa                                                                               <  1:3240199/93‑1 (MQ=255)
            tAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTAt                                                                              >  2:1816525/1‑93 (MQ=255)
            tAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTAt                                                                              >  1:1334966/1‑93 (MQ=255)
             aaaTATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTAtt                                                                             <  1:1424693/93‑1 (MQ=255)
             aaaTATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTAtt                                                                             >  2:1368475/1‑93 (MQ=255)
              aaTATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTAttt                                                                            >  2:1960136/1‑93 (MQ=255)
               atatAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTg                                                                           >  1:4357201/1‑93 (MQ=255)
               atatAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTg                                                                           <  1:899009/93‑1 (MQ=255)
                tataAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTgg                                                                          <  2:3702420/93‑1 (MQ=255)
                   aaGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGc                                                                       >  1:1587157/1‑93 (MQ=255)
                   aaGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGc                                                                       >  2:4482616/1‑93 (MQ=255)
                    aGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCa                                                                      <  2:228488/93‑1 (MQ=255)
                     ggATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCaa                                                                     >  2:430122/1‑93 (MQ=255)
                        tAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACt                                                                  >  1:2446495/1‑93 (MQ=255)
                         aaaTCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTg                                                                 >  2:5439960/1‑93 (MQ=255)
                          aaTCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTgg                                                                <  1:4996846/93‑1 (MQ=255)
                           aTCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGc                                                               <  2:3741347/93‑1 (MQ=255)
                           aTCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTACCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGc                                                               <  2:4234353/93‑1 (MQ=255)
                           aTCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTCCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGc                                                               <  2:5554549/93‑1 (MQ=255)
                            tCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGcc                                                              >  1:1474786/1‑93 (MQ=255)
                            tCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGcc                                                              >  2:513444/1‑93 (MQ=255)
                            tCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGcc                                                              <  1:4557731/93‑1 (MQ=255)
                             cAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCg                                                             >  2:3865930/1‑93 (MQ=255)
                             cAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCg                                                             >  1:3835840/1‑93 (MQ=255)
                              aaCATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGa                                                            <  1:5796536/93‑1 (MQ=255)
                              aaCATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGa                                                            >  1:4003760/1‑93 (MQ=255)
                              aaCATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTAGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGa                                                            <  1:3927781/93‑1 (MQ=255)
                               aCATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGAt                                                           <  1:5497601/93‑1 (MQ=255)
                                cATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATa                                                          <  1:3413225/93‑1 (MQ=255)
                                  tttttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATaaa                                                        >  1:680396/1‑93 (MQ=255)
                                   ttttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAAc                                                       <  1:1009508/93‑1 (MQ=255)
                                    tttGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACg                                                      <  2:4949443/93‑1 (MQ=255)
                                      tgtctgtcTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGa                                                    <  1:2611157/93‑1 (MQ=255)
                                        tctgtctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGact                                                  <  1:5684571/93‑1 (MQ=255)
                                          tgtctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGactac                                                <  1:1021558/93‑1 (MQ=255)
                                          tgtctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGactac                                                >  1:2584229/1‑93 (MQ=255)
                                            tctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActt                                              >  1:4853772/1‑93 (MQ=255)
                                             ctTCAGAAACCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtc                                             <  2:1319093/93‑1 (MQ=255)
                                             ctTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtc                                             <  2:785865/93‑1 (MQ=255)
                                               tCAGAAACCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtcct                                           <  2:3172045/93‑1 (MQ=255)
                                               tCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtcct                                           >  2:4064664/1‑93 (MQ=255)
                                                cAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtcctt                                          >  2:2000253/1‑93 (MQ=255)
                                                 aGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTActtccttc                                         >  2:2655234/1‑93 (MQ=255)
                                                  gAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACttccttcc                                        >  2:2607250/1‑93 (MQ=255)
                                                  gAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACttccttcc                                        <  1:1146938/93‑1 (MQ=255)
                                                     aaCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTAc                                     >  2:2920258/1‑93 (MQ=255)
                                                     aaCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTAc                                     >  1:1107690/1‑93 (MQ=255)
                                                      aCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTAcc                                    >  2:5560811/1‑93 (MQ=255)
                                                       ccACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCt                                   >  1:3510838/1‑93 (MQ=255)
                                                       ccACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCt                                   >  1:3869330/1‑93 (MQ=255)
                                                        cacaTCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTg                                  <  1:4469382/93‑1 (MQ=255)
                                                        cacaTCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTg                                  <  2:4985411/93‑1 (MQ=255)
                                                          caTCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGc                                <  1:1918018/93‑1 (MQ=255)
                                                          caTCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGc                                >  1:2461601/1‑93 (MQ=255)
                                                          caTCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGc                                >  2:6174929/1‑93 (MQ=255)
                                                            tCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAg                              >  2:5973982/1‑93 (MQ=255)
                                                              tttCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGAt                            <  2:3330040/93‑1 (MQ=255)
                                                                tCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATaa                          <  2:3924402/93‑1 (MQ=255)
                                                                tCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATaa                          <  2:2991586/93‑1 (MQ=255)
                                                                  aaTCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATg                        >  2:4800670/1‑93 (MQ=255)
                                                                    tctcTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGa                      >  1:306783/1‑93 (MQ=255)
                                                                    tctcTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGa                      >  1:4047284/1‑93 (MQ=255)
                                                                     ctctATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAg                     <  2:5879110/93‑1 (MQ=255)
                                                                     ctctATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAg                     <  2:1439069/93‑1 (MQ=255)
                                                                      tctATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGt                    >  2:84492/1‑93 (MQ=255)
                                                                      tctATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGt                    <  1:2138723/93‑1 (MQ=255)
                                                                        tATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTa                  <  2:6030054/93‑1 (MQ=255)
                                                                        tATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTa                  >  1:87041/1‑93 (MQ=255)
                                                                        tATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTa                  >  1:1257795/1‑93 (MQ=255)
                                                                         aTGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTaa                 >  2:5485025/1‑93 (MQ=255)
                                                                         aTGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTaa                 >  1:1705064/1‑93 (MQ=255)
                                                                         aTGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTaa                 <  1:1405506/93‑1 (MQ=255)
                                                                          tGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAAt                <  1:2202691/93‑1 (MQ=255)
                                                                           gATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATa               >  1:532628/1‑93 (MQ=255)
                                                                           gATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGCACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATa               <  2:354411/93‑1 (MQ=255)
                                                                            aTCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATAc              >  2:5652177/1‑93 (MQ=255)
                                                                             tCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACa             <  2:2038558/93‑1 (MQ=255)
                                                                               gTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGt           >  2:2330078/1‑93 (MQ=255)
                                                                               gTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGt           <  1:2826616/93‑1 (MQ=255)
                                                                               gTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGt           >  1:6055999/1‑93 (MQ=255)
                                                                                ttttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTg          <  1:3167100/93‑1 (MQ=255)
                                                                                ttttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTg          >  2:1226283/1‑93 (MQ=255)
                                                                                ttttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTg          >  1:5217887/1‑93 (MQ=255)
                                                                                 tttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTgg         >  1:670842/1‑93 (MQ=255)
                                                                                   tCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTc       >  1:248756/1‑93 (MQ=255)
                                                                                   tCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTc       >  2:5909329/1‑93 (MQ=255)
                                                                                     cTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTGCTACCTGGCAGATAATGGAGTTAATACAGTGGTCAt     <  2:5774056/93‑1 (MQ=255)
                                                                                     cTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCAt     >  2:5298410/1‑93 (MQ=255)
                                                                                     cTCGTCTGATTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCAt     >  2:6152191/1‑93 (MQ=255)
                                                                                      tCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCAtt    >  1:2051735/1‑93 (MQ=255)
                                                                                             |                                                                                       
GTGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTC  >  NC_000913/4502207‑4502386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: