BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,209,664	(G)_5→6	coding (96/834 nt)	mcrA →	McrA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,209,659	1	.	G	99.3%	475.4 / ‑3.8	147	coding (91/834 nt)	mcrA	McrA
Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (80/66); total (81/66)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

Only 100 of 189 total aligned reads displayed.

TTATGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑GGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGGTGTATCCCAAGTCG  >  NC_000913/1209567‑1209746

ttatGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGt                                                                                          >  1:2310732/1‑93 (MQ=255)

ttatGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGt                                                                                          >  1:598288/1‑93 (MQ=255)

 tatGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑g                                                                                        <  2:2392386/93‑1 (MQ=255)

 tatGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑g                                                                                        >  2:4072234/1‑93 (MQ=255)

 tatGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑g                                                                                        <  2:1059549/93‑1 (MQ=255)

  atGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑gg                                                                                       >  2:4695788/1‑93 (MQ=255)

  atGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑gg                                                                                       <  1:1992822/93‑1 (MQ=255)

   tGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggg                                                                                      <  1:4476936/93‑1 (MQ=255)

   tGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggg                                                                                      <  1:1529154/93‑1 (MQ=255)

   tGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGAGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggg                                                                                      >  1:1897647/1‑93 (MQ=255)

    gCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑gggg                                                                                     <  2:6019765/93‑1 (MQ=255)

    gCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑gggg                                                                                     <  2:1598570/93‑1 (MQ=255)

    gCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑gggg                                                                                     <  1:1544905/93‑1 (MQ=255)

     cATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGGTAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggg                                                                                    >  2:2080842/1‑93 (MQ=255)

     cATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggg                                                                                    <  2:3323732/93‑1 (MQ=255)

     cATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggg                                                                                    <  2:186431/93‑1 (MQ=255)

     cATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggg                                                                                    <  2:819080/93‑1 (MQ=255)

     cATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggg                                                                                    <  2:943955/93‑1 (MQ=255)

      aTGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑gggggg                                                                                   >  2:5270327/1‑92 (MQ=255)

       tGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggggc                                                                                  >  1:3051652/1‑91 (MQ=255)

       tGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggggc                                                                                  >  1:2683152/1‑91 (MQ=255)

        gTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggggcc                                                                                 >  1:3770223/1‑90 (MQ=255)

         tttttGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑ggggggccg                                                                                <  1:108583/93‑5 (MQ=255)

            ttGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCgggg                                                                              >  2:5055000/1‑92 (MQ=255)

            ttGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGt                                                                              <  2:3738632/93‑1 (MQ=255)

             tGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTg                                                                             >  1:5430469/1‑93 (MQ=255)

              gATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGa                                                                            <  1:1704303/93‑1 (MQ=255)

              gATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGa                                                                            >  2:5634715/1‑93 (MQ=255)

                taataaTGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACa                                                                          <  2:4469654/93‑1 (MQ=255)

                taataaTGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACa                                                                          >  1:407044/1‑93 (MQ=255)

                taataaTGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACa                                                                          >  2:2485405/1‑93 (MQ=255)

                 aataatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAg                                                                         >  2:4564565/1‑93 (MQ=255)

                 aataatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAg                                                                         <  1:5323898/93‑1 (MQ=255)

                  ataatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGa                                                                        >  2:1423658/1‑93 (MQ=255)

                  ataatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGa                                                                        >  1:2917890/1‑93 (MQ=255)

                   taatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGaa                                                                       >  1:2580274/1‑93 (MQ=255)

                   taatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGaa                                                                       >  2:3539865/1‑93 (MQ=255)

                   taatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGaa                                                                       <  1:1645956/93‑1 (MQ=255)

                    aatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGaaa                                                                      >  1:1176608/1‑93 (MQ=255)

                    aatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGaaa                                                                      >  1:5622118/1‑93 (MQ=255)

                    aatGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGaaa                                                                      <  1:1338469/93‑1 (MQ=255)

                     atGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAAc                                                                     >  2:228242/1‑93 (MQ=255)

                      tGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACa                                                                    >  1:2458646/1‑93 (MQ=255)

                      tGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACa                                                                    >  1:3462107/1‑93 (MQ=255)

                       ggAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACaa                                                                   <  2:4965415/93‑1 (MQ=255)

                         aaTTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAg                                                                 >  1:3719738/1‑93 (MQ=255)

                         aaTTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAg                                                                 <  1:6099628/93‑1 (MQ=255)

                           ttGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGAt                                                               >  1:2497237/1‑93 (MQ=255)

                           ttGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGAt                                                               >  2:782107/1‑93 (MQ=255)

                            tGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGAtt                                                              >  1:3249414/1‑93 (MQ=255)

                             taaCTGAAATCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTa                                                             <  1:1616215/92‑1 (MQ=255)

                              aaCTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTAc                                                            >  2:6191516/1‑93 (MQ=255)

                              aaCTGAAAGCTGAGTGTGCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTAc                                                            <  2:5987115/93‑1 (MQ=255)

                               aCTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACa                                                           <  1:1668845/93‑1 (MQ=255)

                                cTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACaa                                                          >  2:5395156/1‑93 (MQ=255)

                                 tGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAat                                                         <  2:3179857/93‑1 (MQ=255)

                                 tGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAat                                                         >  2:5560463/1‑93 (MQ=255)

                                 tGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAat                                                         <  2:2926725/93‑1 (MQ=255)

                                  gAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAata                                                        <  1:1690289/93‑1 (MQ=255)

                                  gAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAata                                                        <  1:3911022/93‑1 (MQ=255)

                                  gAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAata                                                        <  1:2236513/93‑1 (MQ=255)

                                    aaGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAatatt                                                      >  2:4405580/1‑92 (MQ=255)

                                    aaGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATc                                                      <  2:5669910/93‑1 (MQ=255)

                                     aGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCg                                                     <  1:5477765/93‑1 (MQ=255)

                                     aGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCg                                                     >  1:4666079/1‑93 (MQ=255)

                                      gCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGc                                                    <  2:3242076/93‑1 (MQ=255)

                                      gCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGc                                                    >  2:3820716/1‑93 (MQ=255)

                                        tGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGctc                                                  >  1:3311679/1‑93 (MQ=255)

                                        tGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGctc                                                  <  2:4182569/93‑1 (MQ=255)

                                        tGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGctc                                                  >  2:6258088/1‑93 (MQ=255)

                                         gAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGctct                                                 >  1:4139075/1‑93 (MQ=255)

                                         gAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGctct                                                 >  2:3873424/1‑93 (MQ=255)

                                            tgtTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGa                                              >  1:5198671/1‑93 (MQ=255)

                                            tgtTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGa                                              >  2:504787/1‑93 (MQ=255)

                                            tgtTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGa                                              <  1:4220160/93‑1 (MQ=255)

                                            tgtTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGa                                              >  1:6283722/1‑93 (MQ=255)

                                              ttCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGAtt                                            <  2:1224256/93‑1 (MQ=255)

                                              ttCGATAGGTGAAGAGGATGGTGTTTATGGGCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGAtt                                            >  1:4479199/1‑93 (MQ=255)

                                               tCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATta                                           <  1:5951331/93‑1 (MQ=255)

                                               tCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATta                                           <  1:769926/93‑1 (MQ=255)

                                                 gATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATtata                                         <  2:1125003/93‑1 (MQ=255)

                                                  aTAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTatat                                        <  1:5880738/93‑1 (MQ=255)

                                                   tAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATc                                       >  2:5247490/1‑93 (MQ=255)

                                                         aaGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATCTCATTGaa                                 >  2:1536821/1‑93 (MQ=255)

                                                         aaGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGaa                                 <  1:5568124/93‑1 (MQ=255)

                                                             ggATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACggt                             >  2:514237/1‑93 (MQ=255)

                                                              gATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACggtt                            <  2:3989387/93‑1 (MQ=255)

                                                              gATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACggtt                            <  1:1454799/93‑1 (MQ=255)

                                                              gATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACggtt                            <  1:4787763/93‑1 (MQ=255)

                                                                  gtgtTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACggttggtt                        <  2:6307215/93‑1 (MQ=255)

                                                                  gtgtTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACggttggtt                        <  1:2047076/93‑1 (MQ=255)

                                                                  gtggTTATTGGCTAATCCTTGAGGCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACggttggtt                        <  1:3154246/93‑1 (MQ=255)

                                                                  gggtTTATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACggttggtt                        >  2:2593902/3‑93 (MQ=255)

                                                                       tATGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTc                   >  1:1844084/1‑93 (MQ=255)

                                                                         tGGTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTg                 >  1:4624299/1‑93 (MQ=255)

                                                                           gTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGgt               <  2:5343431/93‑1 (MQ=255)

                                                                           gTCTAATCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGgt               >  2:508266/1‑93 (MQ=255)

                                                                               aaTCCTTGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGGTGTAt           >  1:3032138/1‑93 (MQ=255)

                                                                                    ttGAGTCGTGGGGGGCCGGGTGACAGAGACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGGTGTATCCCaa      >  1:4014357/1‑93 (MQ=255)

                                                                                    ttGAGTCGTGGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGGTGTATCCCaa      >  1:3005703/1‑93 (MQ=255)

TTATGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGT‑GGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGGTGTATCCCAAGTCG  >  NC_000913/1209567‑1209746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`