| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,983,127 | (C)5→6 | intergenic (‑35/+35) | araG ← / ← araF | ATP‑binding component of high‑affinity L‑arabinose transport system/L‑arabinose‑binding periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,983,122 | 1 | . | C | 98.6% | 651.6 / 1.5 | 207 | intergenic (‑30/+40) | araG/araF | ATP‑binding component of high‑affinity L‑arabinose transport system/L‑arabinose‑binding periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base C (97/107); total (98/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
Only 100 of 237 total aligned reads displayed.
CTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑A‑CCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTC > NC_000913/1983030‑1983209 | cTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTca‑c‑a > 1:3750520/1‑93 (MQ=255) ttAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCa‑c‑a‑c > 1:3859270/1‑93 (MQ=255) ttAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCa‑c‑a‑c > 2:292044/1‑93 (MQ=255) ttAACGCCGGGAAACGTTTTACCGATACCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCa‑c‑a‑c > 1:2147028/1‑93 (MQ=255) tAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑A‑cc < 1:4275676/93‑1 (MQ=255) aaCGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑A‑ccc > 1:123434/1‑93 (MQ=255) aaCGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑A‑ccc > 1:735450/1‑93 (MQ=255) aCGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑A‑cccc > 1:4017154/1‑93 (MQ=255) cGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑A‑cccccctc < 2:1814624/93‑4 (MQ=255) gAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGc > 2:1658264/1‑93 (MQ=255) aaCGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGcat > 2:4262249/1‑93 (MQ=255) gTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGcatcat > 2:3229612/1‑93 (MQ=255) ttttACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATg > 2:6073522/1‑93 (MQ=255) ttttACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATg < 1:1586131/93‑1 (MQ=255) ttttACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATg > 2:1378657/1‑93 (MQ=255) tttACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGc < 1:1088733/93‑1 (MQ=255) ttACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCa < 1:3172158/93‑1 (MQ=255) ccGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCagag < 1:4756557/93‑1 (MQ=255) ccGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCagag < 2:5053775/93‑1 (MQ=255) cGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAgg < 2:4975850/93‑1 (MQ=255) aTGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAgggg > 1:5081566/1‑93 (MQ=255) aTGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAgggg < 1:5265159/93‑1 (MQ=255) tGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGa > 2:2086781/1‑93 (MQ=255) tGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGa > 1:3443593/1‑93 (MQ=255) gCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGaa < 2:4180574/93‑1 (MQ=255) cgcgAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAAtt > 1:3565330/1‑93 (MQ=255) cgcgAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAAtt > 1:488557/1‑93 (MQ=255) aaaTGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTc > 2:1763322/1‑93 (MQ=255) aaaTGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTc < 1:5959484/93‑1 (MQ=255) gagagaTACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGc < 1:198658/93‑1 (MQ=255) aagagaTACGGGGGAGACTGTTCCATACCGTCTCCGTGACTCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGc < 2:5439311/92‑1 (MQ=255) agagaTACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCa > 1:1412079/1‑93 (MQ=255) agaTACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCaaa < 2:3509084/93‑1 (MQ=255) tgcGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAtta < 2:1328321/91‑1 (MQ=255) tACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAtta > 1:4149369/1‑93 (MQ=255) tACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAtta > 1:1384302/1‑93 (MQ=255) aCGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttac < 1:1537086/93‑1 (MQ=255) aCGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttac < 2:4777917/93‑1 (MQ=255) aCGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttac > 2:1888692/1‑93 (MQ=255) cGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttact < 1:2805825/93‑1 (MQ=255) cGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttact < 2:2541813/93‑1 (MQ=255) cGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttact < 1:6119431/93‑1 (MQ=255) ggggTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttactt < 1:1251859/93‑1 (MQ=255) ggggTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttactt > 2:3660524/1‑93 (MQ=255) ggggTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttactt < 1:5569590/93‑1 (MQ=255) gggTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑CGC‑CCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttactta < 2:3841682/93‑1 (MQ=255) ggTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttacttac > 2:900135/1‑93 (MQ=255) ggTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttacttac < 1:2365383/93‑1 (MQ=255) ggTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAAttacttac < 1:2426658/93‑1 (MQ=255) gTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTAcc > 2:2697369/1‑93 (MQ=255) gTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTAcc < 2:4411863/93‑1 (MQ=255) gTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTAcc < 1:4854124/93‑1 (MQ=255) gTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTAcc < 2:4635008/93‑1 (MQ=255) tAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTAccc > 2:229634/1‑92 (MQ=255) aGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGc < 1:3953801/93‑1 (MQ=255) gACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGcc < 2:2166045/93‑1 (MQ=255) gACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGcc < 1:836368/93‑1 (MQ=255) gACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGcc > 2:6218334/1‑93 (MQ=255) aCTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTTCGGCAAATTACTTACCCCCt > 1:4396173/1‑93 (MQ=255) cTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTa < 2:1933290/93‑1 (MQ=255) tGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTaa > 2:5983139/1‑93 (MQ=255) gTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTaaa < 2:4656638/93‑1 (MQ=255) gTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTaaa > 1:3351110/1‑93 (MQ=255) tGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAAcc < 1:2604789/93‑1 (MQ=255) aTAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCttt > 1:2689384/1‑93 (MQ=255) tatcGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCTGGCAAATTACTTACCGCCTAAACCtttt < 2:5868452/90‑1 (MQ=255) tAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCCTGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCtttt > 1:2333401/1‑93 (MQ=255) tAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCtttt > 1:3330041/1‑93 (MQ=255) aaCGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCttttt < 1:2876587/93‑1 (MQ=255) aaCGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCttttt < 2:5039554/93‑1 (MQ=255) aaCGTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCttttt < 1:428362/93‑1 (MQ=255) gTCTCCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTtct > 1:1659660/1‑93 (MQ=255) tctcCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTtctc > 2:3024776/1‑93 (MQ=255) ctcCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTcc < 2:6153100/93‑1 (MQ=255) tcCGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCa < 1:5369169/93‑1 (MQ=255) ccGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAg < 2:155396/93‑1 (MQ=255) ccGTGAATCACTGGTCGTTCA‑A‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAg < 2:4221156/93‑1 (MQ=255) cGTGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGt < 1:1596622/93‑1 (MQ=255) tGAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGttc > 2:2815990/1‑93 (MQ=255) gAATCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGttct > 1:36364/1‑93 (MQ=255) aaTCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGttctt < 2:5213409/93‑1 (MQ=255) tCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTtcttct > 2:5768322/1‑93 (MQ=255) tCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTtcttct > 1:4893882/1‑93 (MQ=255) tCACTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTtcttct < 1:5638663/93‑1 (MQ=255) aCTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCttt > 2:5171713/1‑93 (MQ=255) cTGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTa > 1:133200/1‑93 (MQ=255) tGGTCGTTCACC‑C‑CCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTaa > 2:3072394/1‑93 (MQ=255) tGGTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTaa > 1:6161103/1‑93 (MQ=255) ggTCGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTaaa < 2:3708402/93‑1 (MQ=255) cGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGtt < 1:292044/93‑1 (MQ=255) cGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGtt < 2:2517971/93‑1 (MQ=255) cGTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTCACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGtt < 1:4551871/93‑1 (MQ=255) gTTCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTg < 1:6137015/93‑1 (MQ=255) ttCA‑C‑ACCCCCCTCTGCATCATGCAGAGTGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGt < 2:1043609/93‑1 (MQ=255) ttCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGGATTTTTTCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCCGTTCTTCTTTTAAAtttt > 2:4292633/1‑91 (MQ=255) ttCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGt < 1:5225213/93‑1 (MQ=255) ttCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGt < 1:5895322/93‑1 (MQ=255) tCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTc < 1:1897536/93‑1 (MQ=255) tCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTc > 1:1787227/1‑93 (MQ=255) tCA‑C‑ACCCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTc < 2:3201309/93‑1 (MQ=255) | CTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCA‑C‑A‑CCCCCTCTGCATCATGCAGAGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTC > NC_000913/1983030‑1983209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |