| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,460,909 | (C)9→10 | intergenic (+243/‑123) | fadL → / → b2345 | FadL/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,460,900 | 1 | . | C | 79.6% | 225.4 / 61.5 | 93 | intergenic (+234/‑132) | fadL/b2345 | FadL/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (3/16); new base C (29/45); total (32/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.32e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.20e-01 | |||||||||||
Only 100 of 133 total aligned reads displayed.
GTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT > NC_000913/2460808‑2460985 | gTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑Ct < 2:312774/93‑1 (MQ=255) tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑C‑‑‑CT‑‑‑‑c < 2:3267435/93‑1 (MQ=255) tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑c < 2:6273286/93‑1 (MQ=255) tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑c < 2:2021009/93‑1 (MQ=255) aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑cc > 2:5370042/1‑93 (MQ=255) ccACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑cccc < 2:5972450/93‑1 (MQ=255) cacaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc > 2:3671776/1‑93 (MQ=255) acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc‑‑c > 2:1984051/1‑93 (MQ=255) caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc‑‑cc < 1:5271303/93‑1 (MQ=255) caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc‑‑cc < 1:1874930/93‑1 (MQ=255) caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc‑‑cc > 1:4287771/1‑93 (MQ=255) aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc‑‑ccccc > 1:4102482/1‑92 (MQ=255) aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc‑‑ccccc > 2:189719/1‑92 (MQ=255) aaaCCTGAAGGGAAAGCCATATTTTCAGGCGTTCTGCTCGTCCTTCCCAAAGAGTTTACTTTTTTTCAATT‑CCAGGA‑T‑‑C‑‑‑CA‑‑‑‑ccccc‑‑cccccct < 2:5963950/93‑4 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc‑‑cccccctg > 2:1395428/1‑89 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑ccccc‑‑cccccctg < 1:4032882/93‑5 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTAt < 1:6033877/93‑1 (MQ=255) aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATtg < 1:1042219/93‑1 (MQ=255) aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATtgt < 1:3350870/93‑1 (MQ=255) gAAAGGCATTTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTgc < 2:3050573/93‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAAAGTTTTCTTTTCCGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTgcgc < 1:2375906/93‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTc > 2:6248337/1‑93 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTc > 1:2706552/1‑93 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCCTG‑CTATTGTTCGCTCa > 1:3193397/1‑93 (MQ=255) gCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCa < 2:6294107/93‑1 (MQ=255) cATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATa < 2:2744958/93‑1 (MQ=255) attttttCAGGGGTTTTCCTCGTCCTTTTCAAAGAGTTTTCTTTTCTGCATTT‑CCCGGA‑TCCC‑‑‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATa < 2:4937419/90‑1 (MQ=255) atatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATa < 1:6195611/93‑1 (MQ=255) atatTTTCAGGCGTTCTGCTCGGCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATa < 2:1085865/93‑1 (MQ=255) atatTTTCAGGCGTTCTGCCCGTTCTTTTCAAAGAATTTTCTTTTCTGCATTT‑CCAGGG‑TTCC‑‑‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATa < 2:5014409/93‑1 (MQ=255) tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATac < 1:5737329/93‑1 (MQ=255) tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGC‑CTATTGTGCGCTCCTac > 1:3531550/1‑93 (MQ=255) tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATaca < 1:6074947/93‑1 (MQ=255) ttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTc < 2:2334243/93‑1 (MQ=255) tCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGC‑CTTTTGTGCGCTCATACCCTCa > 1:535511/1‑93 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCaaa < 1:2121986/93‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCaaa < 1:1230928/93‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCaaa < 1:1343155/93‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTCG‑CTCTTGCGCGCTCATAAACTCaat > 1:1909783/1‑92 (MQ=255) aGGCGTTCTGCCCGTCCTTCTCAAAGAGTTTACTTTTCGGCATTT‑CCAGGA‑TCCC‑‑‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCaaa < 1:686916/93‑1 (MQ=255) ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑TCAGGA‑T‑‑A‑‑‑CT‑‑‑‑CCCCCCACCCCTGG‑CTCTTGTGGGCTGCTGCACTCCAAt > 2:2219657/1‑93 (MQ=255) ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAAtt < 2:1017846/93‑1 (MQ=255) gCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAAtt < 1:3692312/93‑1 (MQ=255) gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑C‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTaaa < 2:3346971/93‑1 (MQ=255) gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑AC‑‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTaaa < 1:1355823/93‑1 (MQ=255) tccgCTCGGCCTTTTCAAAGGCGTTACTTTTCCGCATTTCCCGGGACC‑‑C‑‑‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAg < 2:3655286/90‑1 (MQ=255) tGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATa < 1:3241168/93‑1 (MQ=255) tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑ACCCCC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:64595/92‑1 (MQ=255) tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATa < 1:5655384/92‑1 (MQ=255) gCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAg < 1:562321/93‑1 (MQ=255) gCTCGTCCTTCCTAAAGAGTTTTCTTTTCTGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATa < 1:3372075/93‑1 (MQ=255) ccTCGTCCTTTGCAAAGAGTTTTCTTTTCCGCGTTT‑CCAGGA‑G‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATa < 2:5482210/92‑1 (MQ=255) cTCGTCCTTCTCAAAGAGTTTTCTTTTCTGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAg < 1:1090304/93‑1 (MQ=255) tCGTCCTTCTCGAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCCCCCCCCC‑‑CCCCGGG‑CTTTTGTGCCCTCATACCATCAAATaaaatacg > 2:262772/1‑89 (MQ=255) tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGt < 1:2283881/93‑1 (MQ=255) ccccccTTCCCAAAGAATTTACTTTTCCGCATTT‑CCAGGA‑TCCA‑‑‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAgg < 2:2456387/89‑1 (MQ=255) cGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGt < 2:3525116/93‑1 (MQ=255) tCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCt > 2:5802056/1‑93 (MQ=255) ccTTTTCAAAAAGTTTTCTTTTCTGCATTT‑CCAGGA‑TTCC‑‑‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCt < 2:4734153/93‑1 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑AC‑‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCta < 1:3525419/93‑1 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCCGG‑TCATTGTGCGCTCCCAGACCCAAATTGAACATAGGGTCta > 1:4539180/1‑93 (MQ=255) cTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCta < 1:6244790/93‑1 (MQ=255) ttCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaa > 2:4131071/1‑93 (MQ=255) tgctaaaGAGTTTTGTTTTCTGCATTT‑TCAAGA‑A‑‑ACCCCC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaa < 1:2062515/89‑1 (MQ=255) ctcAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaat < 1:347283/93‑1 (MQ=255) tcAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CCATTTTGCGCTCCAAAACCCAAATTTAAAACAGGTCTtaaaaa > 1:2535832/1‑91 (MQ=255) cAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑ACT‑CT‑‑‑‑CCCCC‑‑CCCCTGG‑CTTTTGTGTGATCATAACCTCAATTTAAAGATAGGTTCtaaataa > 2:4236006/1‑93 (MQ=255) cAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataa < 2:5646554/93‑1 (MQ=255) cAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCCGGCCTATTGTGGGCTCATACACCCAAATTAAACATACGTTCtaaataa > 1:6179776/1‑93 (MQ=255) aaaGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa < 2:3862306/93‑1 (MQ=255) aaGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑C‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat < 2:4584442/93‑1 (MQ=255) aaGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑TTATGTTGCCCTCATCCACTCAAATGAAAGATTGGTTCAaattaaat > 1:5094194/1‑93 (MQ=255) aaGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat < 1:6077247/93‑1 (MQ=255) aaGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGC‑CTTTTGTGCGCCCATACCCCCAAATTAAAAAAAGGTTTTaaataaat > 2:5119269/1‑93 (MQ=255) aaGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 2:2268513/93‑1 (MQ=255) agagTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGC‑CTTTTTGGCCCCTACACTCTCAATTTAAAAATAGTTTTtaaataaaag > 2:1679812/1‑91 (MQ=255) agagTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGa < 2:3125342/93‑1 (MQ=255) agTTTACTTTTCTGCGTTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 2:378494/93‑1 (MQ=255) agTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑T‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGc < 2:4757025/93‑1 (MQ=255) agTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCg < 2:2991174/93‑1 (MQ=255) tACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtt < 1:2413592/93‑1 (MQ=255) tcTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGttt < 1:1811083/92‑1 (MQ=255) aCTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt > 2:4071061/1‑93 (MQ=255) cTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt < 2:3437823/93‑1 (MQ=255) cTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt < 2:1360749/93‑1 (MQ=255) tttCTGCATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt < 1:5356760/93‑1 (MQ=255) tCTGCATTT‑CCAGGA‑T‑‑T‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 1:5107444/93‑1 (MQ=255) tCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt > 2:6031134/1‑93 (MQ=255) tCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa > 2:5188846/1‑93 (MQ=255) tGCATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CCATTGTGCGCCTTTACATTCAACTTAAAGATAGGTTTTAAATAAAAGAGCGttttttatta > 2:3983601/1‑89 (MQ=255) tcATTT‑CCAGGA‑T‑‑ACC‑CC‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg < 1:1103909/92‑1 (MQ=255) cATTT‑CCAGGA‑T‑‑G‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTc < 2:248976/93‑1 (MQ=255) cATTT‑CCAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt < 1:322997/93‑1 (MQ=255) tt‑CCAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAt < 2:229655/93‑1 (MQ=255) cAGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt < 1:2837576/93‑1 (MQ=255) cAGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTc < 2:4030401/93‑1 (MQ=255) aGGA‑T‑‑A‑‑‑CTCC‑‑CCCCC‑‑CCCCCGG‑CTTTTTTGCCCCCCTACACTCAAATTAAAAATAGGTTTTAAATAAATGAGCGTTTTTTTATATTCTAtttt > 2:1640927/1‑92 (MQ=255) aGGA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 1:1107976/93‑1 (MQ=255) ggA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt > 2:4978539/1‑93 (MQ=255) ggA‑T‑‑A‑‑‑CTC‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt < 1:289963/93‑1 (MQ=255) | GTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGGA‑T‑‑A‑‑‑CT‑‑‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT > NC_000913/2460808‑2460985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |