| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,501,888 | +C | coding (618/2496 nt) | b2383 ← | putative PTS system enzyme IIA component, enzyme I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,501,884 | 1 | . | C | 99.4% | 553.8 / ‑3.9 | 174 | coding (622/2496 nt) | b2383 | putative PTS system enzyme IIA component, enzyme I |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (70/103); total (71/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01 | |||||||||||
Only 100 of 196 total aligned reads displayed.
AATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑CCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGT > NC_000913/2501792‑2501971 | aaTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAg < 1:3220178/93‑1 (MQ=255) aTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c > 1:3872354/1‑93 (MQ=255) tGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc > 1:1394153/1‑93 (MQ=255) tGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc > 1:447774/1‑93 (MQ=255) cGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑ccc‑cc < 1:897767/93‑2 (MQ=255) cTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑ccc‑cctg > 2:2211307/1‑90 (MQ=255) cTAACACGTTCGCGCAGATAATCGCTGACAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑ccc‑cctg > 1:1945222/1‑90 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑ccc‑cctga < 2:2273883/93‑5 (MQ=255) acacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATg < 1:3733250/93‑1 (MQ=255) acacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATg > 2:4456427/1‑93 (MQ=255) acacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATg > 2:2055800/1‑93 (MQ=255) cacGTCCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGc < 2:462727/93‑1 (MQ=255) acGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCt > 2:552246/1‑93 (MQ=255) acGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCt > 1:2289756/1‑93 (MQ=255) tCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTc < 1:5834491/93‑1 (MQ=255) cgcAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGt < 1:4222224/93‑1 (MQ=255) cgcAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGt < 1:1744716/93‑1 (MQ=255) cAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGtca < 2:2405586/93‑1 (MQ=255) cAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGtca < 2:1643824/93‑1 (MQ=255) cAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGtca > 2:5343368/1‑93 (MQ=255) aGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGtcat > 2:1872819/1‑93 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGtcatc > 2:2622902/1‑93 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGtcatc < 2:1959710/93‑1 (MQ=255) aTAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGtcatca > 1:4837389/1‑93 (MQ=255) tAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAg < 2:3758683/93‑1 (MQ=255) tAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAg > 2:824283/1‑93 (MQ=255) aaTCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAgg < 1:4973428/93‑1 (MQ=255) tCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCg > 2:4402326/1‑93 (MQ=255) tCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCg > 1:2975219/1‑93 (MQ=255) gCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGAc > 1:3534406/1‑93 (MQ=255) cTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACg > 1:3662269/1‑93 (MQ=255) cTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACg < 1:6136229/93‑1 (MQ=255) cTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACg < 2:3967383/93‑1 (MQ=255) tGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACgg < 1:3416202/93‑1 (MQ=255) tGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACgg > 1:1404000/1‑93 (MQ=255) gcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGat < 2:4705507/93‑1 (MQ=255) gcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGat < 1:1472458/93‑1 (MQ=255) cagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGata > 1:972660/1‑93 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATAtt > 2:1143235/1‑93 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATAtt < 1:6081151/93‑1 (MQ=255) ggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGc < 2:1815225/93‑1 (MQ=255) ggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGc < 1:5523647/93‑1 (MQ=255) gcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGcc < 2:831672/93‑1 (MQ=255) cagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCt > 2:3451661/1‑93 (MQ=255) agaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTg > 2:2836130/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc < 2:3562673/93‑1 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc < 1:2888544/93‑1 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc < 1:2941386/93‑1 (MQ=255) aaaGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCa < 1:5208931/93‑1 (MQ=255) ggCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcat > 1:2857735/1‑93 (MQ=255) gcgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatc > 1:5697526/1‑93 (MQ=255) cAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CCGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCatcatc < 1:3613670/93‑1 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc > 2:5011162/1‑93 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc < 2:4508783/93‑1 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc > 1:4720073/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt < 1:3077064/93‑1 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 2:4246262/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt < 1:4012791/93‑1 (MQ=255) aCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGACTGCAAATTCATCATCCTg > 2:5753280/1‑93 (MQ=255) cTGCTCCATATTGCTGATGATGGCCGCCCCCAG‑CCCACTGATGCTGTTCTGTCATCAGGCGAAGGATATTGCCTGCACATTCATCATGCTGaa > 2:2432216/1‑93 (MQ=255) cTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGaa < 1:3174382/93‑1 (MQ=255) cTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGaa < 1:2415636/93‑1 (MQ=255) tCCATATTGCTGATGATCGCCGCCCCCCGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATGTTGCCTGCAAATTCATCATCCTGAATCAg > 2:4186509/1‑93 (MQ=255) atatTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGa > 1:3314442/1‑93 (MQ=255) atatTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGa > 2:3847163/1‑93 (MQ=255) atatTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGa < 2:605668/93‑1 (MQ=255) atatTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGa > 1:5313739/1‑93 (MQ=255) atacTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGa < 2:2991477/93‑1 (MQ=255) tatTGCTGATGTTCGCCTCCTCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCGGCAAATTCATCATCCTGAATCAGCGAc < 2:3610301/93‑1 (MQ=255) tatTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGAc > 2:5987423/1‑93 (MQ=255) tatTGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGAc > 2:1518346/1‑93 (MQ=255) tGCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACaaa < 1:940817/93‑1 (MQ=255) gCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAAt < 1:3624869/93‑1 (MQ=255) gCTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAAt < 2:5144893/93‑1 (MQ=255) cTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg < 2:5652942/93‑1 (MQ=255) cTGATGATCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg < 2:2184483/93‑1 (MQ=255) tgatgaTCGCCTCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATgg < 1:5177871/93‑1 (MQ=255) tgatgaTCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATgg < 1:4849660/93‑1 (MQ=255) tgatgaTCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATgg < 2:4788772/93‑1 (MQ=255) gatgatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATtgg > 1:4608810/1‑93 (MQ=255) gatgatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATggg > 2:1839315/1‑93 (MQ=255) gatgatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATggg < 1:4160055/93‑1 (MQ=255) gatgatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATggg < 2:3261185/93‑1 (MQ=255) gatgatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATggg < 1:469043/93‑1 (MQ=255) gatgatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATggg > 1:755776/1‑93 (MQ=255) gatgatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATggg > 1:5975839/1‑93 (MQ=255) atgatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgc < 1:655396/93‑1 (MQ=255) gatCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcgc < 2:2918543/93‑1 (MQ=255) atCGCCGCCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCt < 2:5214129/93‑1 (MQ=255) cgccgcCCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGa < 2:5933003/93‑1 (MQ=255) gccgccCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAg < 2:2727094/93‑1 (MQ=255) gccgccCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAg < 1:1641464/93‑1 (MQ=255) cgccCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGa < 2:4929876/93‑1 (MQ=255) gccCCCAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGAt < 2:4894872/93‑1 (MQ=255) ccccAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAg > 1:5422696/1‑93 (MQ=255) ccccAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAg > 1:4542290/1‑93 (MQ=255) ccccAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAg > 1:5098733/1‑93 (MQ=255) cccAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGt > 1:151901/1‑93 (MQ=255) cccAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGt > 1:6259278/1‑93 (MQ=255) cccAGCCCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCACCCGGAATCAGCGACAAATGGGCGCTGAGGATAGt < 2:3321035/93‑1 (MQ=255) | AATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑CCC‑CTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGT > NC_000913/2501792‑2501971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |