BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,997,285	(T)_6→7	coding (629/756 nt)	b2865 ←	putative lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,997,279	1	.	T	100.0%	841.0 / NA	223	I212N (ATC→AAC)	b2865	putative lipoprotein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (95/128); total (95/128)

Only 100 of 249 total aligned reads displayed.

GCAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT  >  NC_000913/2997187‑2997366

 cAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑t                                                                                        <  1:1642534/93‑1 (MQ=255)

  aaGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tt                                                                                       <  2:4894779/93‑1 (MQ=255)

  aaGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tt                                                                                       >  2:1372149/1‑93 (MQ=255)

   aGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGACCAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑ttt                                                                                      <  1:2816323/93‑1 (MQ=255)

   aGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑ttt                                                                                      >  2:5690062/1‑93 (MQ=255)

    gTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttt                                                                                     >  1:5631538/1‑93 (MQ=255)

        cGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGC‑tttttttg                                                                                 >  1:1142604/1‑91 (MQ=255)

         gTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttttttgc                                                                                <  2:3781061/93‑4 (MQ=255)

         gTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttttttgc                                                                                >  2:4763116/1‑90 (MQ=255)

            gCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCa                                                                              <  1:5972570/93‑1 (MQ=255)

             cGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAg                                                                             >  1:724125/1‑93 (MQ=255)

              ggATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGc                                                                            <  1:6040474/93‑1 (MQ=255)

                 tCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCtt                                                                         >  1:3156989/1‑93 (MQ=255)

                 tCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCtt                                                                         >  1:1028446/1‑93 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  1:2979298/93‑1 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  2:3445170/93‑1 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  2:2575946/93‑1 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  1:2398834/93‑1 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       >  1:1158752/1‑93 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  2:2209641/93‑1 (MQ=255)

                    aTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCAc                                                                      >  2:3696781/1‑93 (MQ=255)

                      tGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGc                                                                    <  1:2773441/93‑1 (MQ=255)

                      tGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGc                                                                    <  1:3747376/93‑1 (MQ=255)

                       gCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCt                                                                   <  2:2160922/93‑1 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  <  2:2910881/93‑1 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  <  2:3675484/93‑1 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  <  1:3481475/93‑1 (MQ=255)

                         cGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCttt                                                                 <  2:5987943/93‑1 (MQ=255)

                         cGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCttt                                                                 >  1:319980/1‑93 (MQ=255)

                         cGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCttt                                                                 <  2:5317066/93‑1 (MQ=255)

                          gTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTg                                                                <  2:3720013/93‑1 (MQ=255)

                             gCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGccc                                                             <  1:4387444/93‑1 (MQ=255)

                               aCGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCat                                                           >  2:1042649/1‑93 (MQ=255)

                                cGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCatt                                                          <  2:4163208/93‑1 (MQ=255)

                                 ggTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCatta                                                         >  1:459483/1‑93 (MQ=255)

                                  gTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCattat                                                        <  1:273032/93‑1 (MQ=255)

                                  gTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCattat                                                        <  2:1579611/93‑1 (MQ=255)

                                   tAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCattatt                                                       >  1:1200143/1‑93 (MQ=255)

                                    aaCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTAttt                                                      <  1:398534/93‑1 (MQ=255)

                                    aaCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTAttt                                                      >  2:2829830/1‑93 (MQ=255)

                                     aCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTa                                                     <  2:3024496/93‑1 (MQ=255)

                                     aCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTa                                                     <  1:2902300/93‑1 (MQ=255)

                                     aCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTa                                                     <  1:325817/93‑1 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   <  2:3926337/93‑1 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   <  1:1366486/93‑1 (MQ=255)

                                        aaTCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCa                                                  <  1:5762952/93‑1 (MQ=255)

                                        aaTCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCa                                                  >  1:233425/1‑93 (MQ=255)

                                         aTCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAg                                                 >  2:2769359/1‑93 (MQ=255)

                                          tCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGc                                                <  1:925495/93‑1 (MQ=255)

                                           cTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCa                                               <  2:6240743/93‑1 (MQ=255)

                                            tGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAt                                              <  2:649528/93‑1 (MQ=255)

                                            tGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAt                                              >  1:449924/1‑93 (MQ=255)

                                            tGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAt                                              >  2:4981267/1‑93 (MQ=255)

                                             ggAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATc                                             >  2:5650266/1‑93 (MQ=255)

                                             ggAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATc                                             <  1:5398953/93‑1 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  1:248970/1‑93 (MQ=255)

                                                aaTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtg                                          >  1:364536/1‑93 (MQ=255)

                                                aaTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtg                                          >  2:5541581/1‑93 (MQ=255)

                                                  tGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTc                                        >  1:5841969/1‑93 (MQ=255)

                                                    cAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCAt                                      <  1:1771946/93‑1 (MQ=255)

                                                     cggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCAtt                                     <  2:3079661/92‑1 (MQ=255)

                                                     aGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCAtt                                     >  2:2132213/1‑93 (MQ=255)

                                                     aGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCAtt                                     >  1:894120/1‑93 (MQ=255)

                                                     aGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCAtt                                     <  2:4329262/93‑1 (MQ=255)

                                                     aGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCAtt                                     >  1:48104/1‑93 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAACAGCATCGTGTCATTa                                    >  2:1723893/1‑93 (MQ=255)

                                                        cGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATg                                  <  1:2227942/93‑1 (MQ=255)

                                                         gAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATgg                                 >  2:5932021/1‑93 (MQ=255)

                                                          aaCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCGAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATggg                                <  2:3561130/93‑1 (MQ=255)

                                                          aaCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATggg                                <  2:1486870/93‑1 (MQ=255)

                                                             aGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGt                             >  1:3546754/1‑93 (MQ=255)

                                                              gATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTa                            >  1:4674187/1‑93 (MQ=255)

                                                               aTGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTaa                           <  2:879661/93‑1 (MQ=255)

                                                                tGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAg                          >  1:187491/1‑93 (MQ=255)

                                                                 gCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGc                         <  2:4798788/93‑1 (MQ=255)

                                                                 gCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGc                         <  1:648761/93‑1 (MQ=255)

                                                                 gCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGc                         <  1:5130155/93‑1 (MQ=255)

                                                                    gCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgt                      >  1:3046397/1‑93 (MQ=255)

                                                                       tCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaat                   >  1:1533362/1‑93 (MQ=255)

                                                                       tCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaat                   <  2:1857672/93‑1 (MQ=255)

                                                                        ccGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatg                  >  1:5441944/1‑93 (MQ=255)

                                                                          gTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatgta                <  2:2398882/93‑1 (MQ=255)

                                                                          gTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatgta                <  2:1779911/93‑1 (MQ=255)

                                                                           tGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatgtaa               <  2:3384431/93‑1 (MQ=255)

                                                                            gCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatgtaat              <  1:4400471/93‑1 (MQ=255)

                                                                             cTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATc             <  2:5727568/93‑1 (MQ=255)

                                                                             cTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATc             <  1:4513873/93‑1 (MQ=255)

                                                                               ccccATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCtt           >  1:1062994/1‑93 (MQ=255)

                                                                                cccATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTc          >  2:5226889/1‑93 (MQ=255)

                                                                                 ccATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCa         <  1:2322202/93‑1 (MQ=255)

                                                                                    tAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACtg      >  1:5016708/1‑93 (MQ=255)

                                                                                    tAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACtg      <  1:261878/93‑1 (MQ=255)

                                                                                    tAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACtg      <  2:2331022/93‑1 (MQ=255)

                                                                                      gTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTCCCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACtgtg    <  2:4481513/93‑1 (MQ=255)

                                                                                      gTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACtgtg    <  1:2047982/93‑1 (MQ=255)

                                                                                      gTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACtgtg    >  2:765425/1‑93 (MQ=255)

                                                                                       tGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTgtgt   >  1:473198/1‑93 (MQ=255)

                                                                                       tGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTgtgt   <  1:2207868/93‑1 (MQ=255)

                                                                                        ggCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGtt  >  1:3919078/1‑93 (MQ=255)

                                                                                        ggCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGtt  <  2:3519465/93‑1 (MQ=255)

GCAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT  >  NC_000913/2997187‑2997366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`