Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,025,676 +C coding (535/570 nt) ygfQ → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,025,6751.C99.5% 663.8 / ‑3.8 205coding (534/570 nt)ygfQhypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base C (102/102);  total (103/102)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.37e-01

Only 100 of 225 total aligned reads displayed.

GCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑G‑CAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTCGCG  >  NC_000913/3025583‑3025762
                                                                                               |                                                                                       
gCTTACGGTACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACACGATTGAAGGC‑AT‑g                                                                                          >  1:3096116/1‑93 (MQ=255)
  tCACGGTACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑G‑cc                                                                                       >  1:5036845/1‑92 (MQ=255)
  tCACGGTACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑G‑cc                                                                                       >  2:6096731/1‑92 (MQ=255)
   cACGGTACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑G‑cca                                                                                      <  1:420234/93‑3 (MQ=255)
     cGGTACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑G‑ccagt                                                                                    <  1:1003892/93‑5 (MQ=255)
     cGGTACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑G‑ccagt                                                                                    <  1:332630/93‑5 (MQ=255)
     cGGTACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑G‑ccagt                                                                                    <  1:1598319/93‑5 (MQ=255)
       gTACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTgg                                                                                   >  1:932854/1‑93 (MQ=255)
        tACAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGgc                                                                                  >  1:6153159/1‑93 (MQ=255)
         aCAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGgcg                                                                                 >  1:2149531/1‑93 (MQ=255)
         aCAGGTATCAGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGgcg                                                                                 >  1:2000731/1‑93 (MQ=255)
          cAGGTATCGGCATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGgcgc                                                                                <  2:4335686/93‑1 (MQ=255)
             gtatcggcatcgGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCg                                                                             <  2:2719916/93‑1 (MQ=255)
               atcggcatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGt                                                                           <  2:531634/93‑1 (MQ=255)
                tcggcatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTg                                                                          <  2:1850739/93‑1 (MQ=255)
                tcggcatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTg                                                                          <  2:3936359/93‑1 (MQ=255)
                tcggcatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTg                                                                          >  1:4289340/1‑93 (MQ=255)
                tcggcatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTg                                                                          <  2:885836/93‑1 (MQ=255)
                tcggcatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGCATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTg                                                                          >  1:5308552/1‑93 (MQ=255)
                    catcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGtt                                                                      <  1:3954616/92‑1 (MQ=255)
                     atcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGttt                                                                     >  2:5930079/1‑93 (MQ=255)
                     atcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGCATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGttt                                                                     >  2:2875783/1‑93 (MQ=255)
                      tcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGGTTa                                                                    >  2:3517989/1‑93 (MQ=255)
                        gggCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcc                                                                  >  2:5355269/1‑93 (MQ=255)
                        gggCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcc                                                                  <  2:4298513/93‑1 (MQ=255)
                         ggCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcct                                                                 >  1:2967332/1‑93 (MQ=255)
                         ggCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcct                                                                 >  2:4421931/1‑93 (MQ=255)
                           cTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcctcc                                                               <  1:3178005/93‑1 (MQ=255)
                           cTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcctcc                                                               >  2:2091976/1‑93 (MQ=255)
                            tGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcctcct                                                              >  1:2430287/1‑93 (MQ=255)
                            tGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcctcct                                                              <  2:1074490/93‑1 (MQ=255)
                            tGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcctcct                                                              <  2:1915887/93‑1 (MQ=255)
                            tGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcctcct                                                              >  2:5725582/1‑93 (MQ=255)
                            tGTTTCTGCTGCTGATTGCTGCTAACGGCGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTAcctcct                                                              >  1:5513224/1‑93 (MQ=255)
                             gTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCtt                                                             >  2:6005449/1‑93 (MQ=255)
                             gTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCtt                                                             >  1:122742/1‑93 (MQ=255)
                             gTTTCTGCTGCTGATTGCTGCTAACGGCGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCtt                                                             >  1:957256/1‑93 (MQ=255)
                              tttCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTc                                                            <  1:3579992/93‑1 (MQ=255)
                                  tgctgctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCgg                                                        <  2:370158/93‑1 (MQ=255)
                                   gctgctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGt                                                       >  2:4846126/1‑93 (MQ=255)
                                   gctgctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGt                                                       <  2:3296351/93‑1 (MQ=255)
                                      gctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgat                                                    >  2:4639474/1‑93 (MQ=255)
                                      gctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgat                                                    >  1:3764576/1‑93 (MQ=255)
                                       ctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatg                                                   <  1:2748759/93‑1 (MQ=255)
                                        tgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatga                                                  >  1:1907464/1‑93 (MQ=255)
                                        tgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatga                                                  >  1:5695302/1‑93 (MQ=255)
                                        tgATTGCTGCTAACGGTGTGGGTACGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatga                                                  >  1:2769193/1‑93 (MQ=255)
                                         gATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatgat                                                 >  1:2330857/1‑93 (MQ=255)
                                          aTTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatgatg                                                >  1:5943413/1‑93 (MQ=255)
                                          aTTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatgatg                                                <  1:187738/93‑1 (MQ=255)
                                          aTTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatgatg                                                <  1:2142266/93‑1 (MQ=255)
                                               tgctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCtt                                           >  2:588845/1‑93 (MQ=255)
                                                gctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTg                                          >  1:5817740/1‑93 (MQ=255)
                                                   aaCGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTT‑C‑CAGTGGCGCTCGGAGAGTTTATCTCCTTCCCGGTGATGATGAGCttgttg                                       >  2:3090307/1‑93 (MQ=255)
                                                   aaCGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTg                                       <  2:644741/93‑1 (MQ=255)
                                                    aCGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTgg                                      >  2:5692032/1‑93 (MQ=255)
                                                       gtgtGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGc                                   >  2:5003404/1‑93 (MQ=255)
                                                       gtgtGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGc                                   <  1:4044672/93‑1 (MQ=255)
                                                         gtgGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTg                                 >  2:2167442/1‑93 (MQ=255)
                                                         gtgGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTg                                 >  1:6264276/1‑93 (MQ=255)
                                                         gtgGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGATg                                 >  2:22043/1‑93 (MQ=255)
                                                          tgGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTgg                                <  1:4662221/93‑1 (MQ=255)
                                                             gTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCgg                             >  1:2218892/1‑93 (MQ=255)
                                                             gTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCgg                             <  1:2567406/93‑1 (MQ=255)
                                                               aTGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTc                           >  2:1184111/1‑93 (MQ=255)
                                                               aTGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTc                           >  2:5846078/1‑93 (MQ=255)
                                                               aTGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTc                           <  2:1063805/93‑1 (MQ=255)
                                                                tGGTTATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCa                          >  1:1675518/1‑93 (MQ=255)
                                                                   ttATCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCt                       <  2:5362406/93‑1 (MQ=255)
                                                                      tCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCg                    <  2:3665949/93‑1 (MQ=255)
                                                                      tCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCg                    >  2:894612/1‑93 (MQ=255)
                                                                      tCAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCg                    <  2:1354822/93‑1 (MQ=255)
                                                                      acAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTGCCTCCTACCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCg                    <  2:2865913/92‑1 (MQ=255)
                                                                       cAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCCTCTTCgg                   >  2:15808/1‑93 (MQ=255)
                                                                       cAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCgg                   <  1:3287796/93‑1 (MQ=255)
                                                                       cAAAAACCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCgg                   >  1:3874721/1‑93 (MQ=255)
                                                                        aaaaaCCCGATTGAAGGC‑TTAC‑CAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGc                  >  2:1679163/1‑93 (MQ=255)
                                                                        aaaaaCCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTACTGGGGCTGGGGGTCATCTTCGGc                  >  1:2823031/1‑93 (MQ=255)
                                                                         aaaaCCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGcc                 >  2:5999354/1‑93 (MQ=255)
                                                                          aaaCCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCt                >  1:1933546/1‑93 (MQ=255)
                                                                           aaCCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTg               <  2:2678410/93‑1 (MQ=255)
                                                                           aaCCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTg               >  1:1796658/1‑93 (MQ=255)
                                                                            aCCCGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTgg              >  1:1541559/1‑93 (MQ=255)
                                                                              ccGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGgag            >  1:1439349/1‑93 (MQ=255)
                                                                              ccGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGgag            <  1:1265720/93‑1 (MQ=255)
                                                                              ccGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGgag            <  1:5152293/93‑1 (MQ=255)
                                                                               cGATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGgaga           >  1:5976460/1‑93 (MQ=255)
                                                                                gATTGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGaa          <  2:2273429/93‑1 (MQ=255)
                                                                                  ttGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgt        >  2:4521493/1‑93 (MQ=255)
                                                                                   tGAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtg       >  2:5464447/1‑93 (MQ=255)
                                                                                    gAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt      <  1:5613473/93‑1 (MQ=255)
                                                                                    gAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt      <  1:2292520/93‑1 (MQ=255)
                                                                                    gAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt      <  2:4633510/93‑1 (MQ=255)
                                                                                    gAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt      >  2:3755590/1‑93 (MQ=255)
                                                                                    gAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt      >  2:6290758/1‑93 (MQ=255)
                                                                                    gAAGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTGCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt      <  1:826284/93‑1 (MQ=255)
                                                                                     aaGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGGAGTGTc     >  2:3234085/1‑93 (MQ=255)
                                                                                     aaGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTc     <  1:1096518/93‑1 (MQ=255)
                                                                                     aaGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTc     <  1:4575363/93‑1 (MQ=255)
                                                                                      aGGC‑TT‑GCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTcg    <  1:3562724/93‑1 (MQ=255)
                                                                                               |                                                                                       
GCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGC‑TT‑G‑CAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTCGCG  >  NC_000913/3025583‑3025762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑