BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,189,156	(A)_5→6	coding (509/1065 nt)	yqiI →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,189,151	1	.	A	100.0%	843.5 / NA	220	A168A (GCT→GCA)	yqiI	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (101/119); total (101/119)

Only 100 of 251 total aligned reads displayed.

GGCTACAAAAAGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCT‑AAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAGGTGCT  >  NC_000913/3189059‑3189238

ggCTACAAAAAGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAagctagct                                                                                          >  1:2354965/1‑93 (MQ=255)

    aCAAAAAGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCT‑aaaa                                                                                     >  2:5962232/1‑93 (MQ=255)

     cAAAAAGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCT‑aaaaa                                                                                    >  1:4202856/1‑93 (MQ=255)

      aaaaaGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCT‑aaaaaa                                                                                   <  2:6168619/93‑2 (MQ=255)

      aaaaaGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCT‑aaaaaa                                                                                   <  2:1496521/93‑2 (MQ=255)

      aaaaaGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCT‑aaaaaa                                                                                   <  2:5236759/93‑2 (MQ=255)

         aaGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCT‑aaaaaatgc                                                                                <  1:4182474/93‑5 (MQ=255)

             ccGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAAt                                                                             <  1:842222/93‑1 (MQ=255)

             ccGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAAt                                                                             <  2:2724246/93‑1 (MQ=255)

             ccGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAAt                                                                             <  1:5648286/93‑1 (MQ=255)

              cGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATa                                                                            <  1:2541016/93‑1 (MQ=255)

              cGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATa                                                                            <  2:4731988/93‑1 (MQ=255)

              cGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATa                                                                            <  1:6203740/93‑1 (MQ=255)

               gCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATaa                                                                           <  1:2216569/93‑1 (MQ=255)

                cAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATaaa                                                                          >  2:266770/1‑93 (MQ=255)

                cAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATaaa                                                                          <  1:3135033/93‑1 (MQ=255)

                 aGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAg                                                                         <  2:5757957/93‑1 (MQ=255)

                 aGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAg                                                                         >  1:4021638/1‑93 (MQ=255)

                   tCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGta                                                                       >  1:3459984/1‑93 (MQ=255)

                   tCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGta                                                                       <  1:4772958/93‑1 (MQ=255)

                    cTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGtaa                                                                      <  2:3274990/93‑1 (MQ=255)

                     tGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGtaaa                                                                     <  1:3586971/93‑1 (MQ=255)

                      gTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGtaaat                                                                    >  2:2187717/1‑93 (MQ=255)

                      gTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGtaaat                                                                    >  1:1127507/1‑93 (MQ=255)

                       tAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGtaaata                                                                   >  1:1397635/1‑93 (MQ=255)

                        aGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGtaaataa                                                                  >  1:4583287/1‑93 (MQ=255)

                          tGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATaaaa                                                                >  2:3800307/1‑93 (MQ=255)

                           ggCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATaaaaa                                                               <  2:3081251/93‑1 (MQ=255)

                            gCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATaaaaaa                                                              <  1:6048607/93‑1 (MQ=255)

                             cGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAAc                                                             <  2:2223089/93‑1 (MQ=255)

                              ggTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACt                                                            <  2:3767908/93‑1 (MQ=255)

                               gTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACtt                                                           <  1:5187198/93‑1 (MQ=255)

                                tCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTg                                                          <  2:6085263/93‑1 (MQ=255)

                                 ccTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGt                                                         <  2:4818013/93‑1 (MQ=255)

                                 ccTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGt                                                         >  2:579864/1‑93 (MQ=255)

                                  cTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTa                                                        <  1:3964875/93‑1 (MQ=255)

                                  cTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTa                                                        >  1:1245932/1‑93 (MQ=255)

                                  cTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTa                                                        >  2:5634390/1‑93 (MQ=255)

                                    gAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTAtt                                                      >  2:1903297/1‑93 (MQ=255)

                                    gAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTAtt                                                      <  2:3860621/93‑1 (MQ=255)

                                     aaCCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTa                                                     <  2:4040558/93‑1 (MQ=255)

                                      aCCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTAc                                                    >  2:4544860/1‑93 (MQ=255)

                                       ccGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTAcc                                                   <  1:964523/93‑1 (MQ=255)

                                           aaTTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGAc                                               >  1:5888893/1‑93 (MQ=255)

                                             ttATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGa                                             >  2:5154721/1‑93 (MQ=255)

                                             ttATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGa                                             >  1:4940972/1‑93 (MQ=255)

                                              tATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGaa                                            >  2:915768/1‑93 (MQ=255)

                                              tATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGaa                                            <  1:5058729/93‑1 (MQ=255)

                                               aTCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAat                                           <  2:1676904/93‑1 (MQ=255)

                                               aTCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAat                                           >  2:4936823/1‑93 (MQ=255)

                                               aTCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAat                                           >  1:5724989/1‑93 (MQ=255)

                                                tCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAata                                          >  2:5361526/1‑93 (MQ=255)

                                                tCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAata                                          >  2:2401183/1‑93 (MQ=255)

                                                tCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAata                                          >  2:2513700/1‑93 (MQ=255)

                                                tCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAata                                          >  1:5286539/1‑93 (MQ=255)

                                                 cAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAatat                                         >  1:4528095/1‑93 (MQ=255)

                                                 cAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAatat                                         <  2:2781800/93‑1 (MQ=255)

                                                  aGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAatata                                        <  1:1208524/93‑1 (MQ=255)

                                                    tAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAAtatata                                      >  1:2905147/1‑93 (MQ=255)

                                                       cTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCa                                   >  1:1149203/1‑93 (MQ=255)

                                                         tttCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACt                                 <  1:4896049/93‑1 (MQ=255)

                                                         tttCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACt                                 <  2:1318042/93‑1 (MQ=255)

                                                           tCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTg                               <  1:3753177/93‑1 (MQ=255)

                                                           tCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTg                               >  2:2061415/1‑93 (MQ=255)

                                                            ccAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGa                              >  1:4442418/1‑93 (MQ=255)

                                                            ccAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGa                              <  2:4429738/93‑1 (MQ=255)

                                                            ccAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGa                              <  2:3449996/93‑1 (MQ=255)

                                                             cAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGaa                             <  2:1575182/93‑1 (MQ=255)

                                                             cAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGaa                             >  2:5277091/1‑93 (MQ=255)

                                                                tACGAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAAttt                          >  2:2884854/1‑93 (MQ=255)

                                                                   gAGTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTaaa                       >  2:4863534/1‑93 (MQ=255)

                                                                     gTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAgg                     >  1:4721022/1‑93 (MQ=255)

                                                                     gTGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAgg                     >  2:3409550/1‑93 (MQ=255)

                                                                      tGCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGt                    <  1:5320065/93‑1 (MQ=255)

                                                                       gCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTa                   <  1:323041/93‑1 (MQ=255)

                                                                       gCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTa                   >  2:3176702/1‑93 (MQ=255)

                                                                       gCAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTa                   <  2:5098521/93‑1 (MQ=255)

                                                                        cAGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTAt                  <  2:1068447/93‑1 (MQ=255)

                                                                         aGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTGCCTGACGAATATATAGCACTTGAATTTAAAGGTATg                 <  2:4179882/93‑1 (MQ=255)

                                                                         aGCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATg                 <  2:2620745/93‑1 (MQ=255)

                                                                          gCTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGa                >  2:3567262/1‑93 (MQ=255)

                                                                           cTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAg               <  1:2088427/93‑1 (MQ=255)

                                                                           cTATATATTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAg               <  2:2901506/93‑1 (MQ=255)

                                                                            tatataTTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGGACTTGAATTTAAAGGTATGAGc              >  1:6110907/1‑93 (MQ=255)

                                                                            tatataTTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGc              >  1:4624782/1‑93 (MQ=255)

                                                                             atatatTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCg             >  2:3513321/1‑93 (MQ=255)

                                                                              tatatTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCgg            >  2:3023364/1‑93 (MQ=255)

                                                                              tatatTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCgg            >  1:777305/1‑93 (MQ=255)

                                                                              tatatTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCgg            >  1:289128/1‑93 (MQ=255)

                                                                                tatTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAg          <  1:620046/93‑1 (MQ=255)

                                                                                tatTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAg          <  2:790812/93‑1 (MQ=255)

                                                                                 atTAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGc         <  2:544788/93‑1 (MQ=255)

                                                                                  ttAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCa        >  1:5548864/1‑93 (MQ=255)

                                                                                   tAAGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAg       <  1:2014546/93‑1 (MQ=255)

                                                                                    aaGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAgg      <  1:3674359/93‑1 (MQ=255)

                                                                                    aaGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAgg      <  2:4231639/93‑1 (MQ=255)

                                                                                    aaGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAgg      <  2:5330720/93‑1 (MQ=255)

                                                                                    aaGCTAGCTAAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAgg      <  2:1345638/93‑1 (MQ=255)

                                                                                     agctagctaAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAGGt     <  1:2678572/93‑1 (MQ=255)

                                                                                        tagctaAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAGGTGCt  >  1:1595369/1‑93 (MQ=255)

GGCTACAAAAAGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCT‑AAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAGGTGCT  >  NC_000913/3189059‑3189238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`