Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 66,533 3540 bp→CCCGAGACCCGCACGCGTCGACCTGCA [araD]araB [araD], araA, araB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 66533 70072 3540 239 [0] [0] 244 [araD]–araB [araD],araA,araB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 665320 (0.000)178 (1.030)
+CCCGAGACCCGCACGCGTCGACCTGCA
87/130 0.3 100% coding (19/696 nt) araD L‑ribulose‑5‑phosphate 4‑epimerase
?NC_000913 70073 = 0 (0.000)intergenic (‑25/‑314) araB/araC L‑ribulokinase/transcriptional regulator for ara operon

Only 100 of 239 total aligned reads displayed.

GCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC  >  NC_000913/66440‑66624
                                                                                            |                                                                                            
gccgcGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCg                                                                                              >  1:4481863/1‑93 (MQ=255)
  cgcgCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcc                                                                                            >  2:3524621‑M1/1‑91 (MQ=255)
   gcgcTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGccc                                                                                           <  1:1159972‑M1/93‑4 (MQ=255)
     gcTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccga                                                                                         >  2:5084510‑M1/1‑88 (MQ=255)
      cTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGAAGCGCCAGGTTGGCTTCTAATATCTGGCGcccgag                                                                                        >  1:2810264‑M1/1‑87 (MQ=255)
       tCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgaga                                                                                       <  1:2926263‑M1/93‑8 (MQ=255)
        cgcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagac                                                                                      >  1:1867048‑M1/1‑85 (MQ=255)
          cgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagaccc                                                                                    >  2:230159‑M1/1‑83 (MQ=255)
          cgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagaccc                                                                                    >  1:4798870‑M1/1‑83 (MQ=255)
           gATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccg                                                                                   >  2:1156474‑M1/1‑82 (MQ=255)
            aTCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgc                                                                                  >  2:5991316‑M1/1‑81 (MQ=255)
            aTCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgc                                                                                  >  1:910244‑M1/1‑81 (MQ=255)
             tCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgca                                                                                 <  2:4651359‑M1/93‑14 (MQ=255)
             tCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgca                                                                                 <  1:6172954‑M1/93‑14 (MQ=255)
             tCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgca                                                                                 <  1:6063928‑M1/93‑14 (MQ=255)
                aCGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgc                                                                              >  2:6176286‑M1/1‑77 (MQ=255)
                aCGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgc                                                                              <  1:6028280‑M1/93‑17 (MQ=255)
                  ggCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgt                                                                            >  1:757731‑M1/1‑75 (MQ=255)
                     gcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcga                                                                         <  1:2765620‑M1/93‑22 (MQ=255)
                      cTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgac                                                                        >  2:1917294‑M1/1‑71 (MQ=255)
                       tcacgTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacc                                                                       <  2:16507‑M1/91‑24 (MQ=255)
                       tGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgcgacccgcacgcgtcgacc                                                                       >  1:2874501‑M1/1‑70 (MQ=255)
                       tGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacc                                                                       <  2:5735948‑M1/93‑24 (MQ=255)
                          cGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgc                                                                    <  1:2065897‑M1/93‑27 (MQ=255)
                          cGTCGCGCCATGTGTGCGTGGCTAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgc                                                                    <  2:712547‑M1/93‑27 (MQ=255)
                           gTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgca                                                                   >  1:3137880‑M1/1‑66 (MQ=255)
                           gTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgca                                                                   <  2:3240094‑M1/93‑28 (MQ=255)
                            ttGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcag                                                                  >  1:1591762‑M1/1‑65 (MQ=255)
                               ccccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggta                                                               <  2:4328286‑M1/93‑32 (MQ=255)
                                 ccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatg                                                             >  1:5660980‑M1/1‑60 (MQ=255)
                                  cATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgg                                                            >  1:5350161‑M1/1‑59 (MQ=255)
                                  cATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgg                                                            <  2:1565080‑M1/93‑35 (MQ=255)
                                   aTGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgga                                                           >  1:4752025‑M1/1‑58 (MQ=255)
                                   aTGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgga                                                           >  1:5532939‑M1/1‑58 (MQ=255)
                                   aTGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgga                                                           <  1:2043569‑M1/93‑36 (MQ=255)
                                    tgtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggag                                                          >  2:5668767‑M1/1‑57 (MQ=255)
                                       gAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaa                                                       >  1:3227825‑M1/1‑54 (MQ=255)
                                         gCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagtaaca                                                     >  1:3941090‑M1/1‑52 (MQ=255)
                                          cGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacag                                                    <  2:3700405‑M1/93‑43 (MQ=255)
                                          cGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacag                                                    <  1:1096801‑M1/93‑43 (MQ=255)
                                           gTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagt                                                   <  1:4242052‑M1/93‑44 (MQ=255)
                                           gTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagt                                                   <  1:2459711‑M1/93‑44 (MQ=255)
                                            tGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagta                                                  <  2:4930788‑M1/93‑45 (MQ=255)
                                            tGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagta                                                  <  1:3483787‑M1/93‑45 (MQ=255)
                                             gACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtag                                                 <  1:4599918‑M1/93‑46 (MQ=255)
                                              aCCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtaga                                                <  1:3033814‑M1/93‑47 (MQ=255)
                                              aCCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtaga                                                >  1:629832‑M1/1‑47 (MQ=255)
                                               ccAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagag                                               <  1:5189592‑M1/93‑48 (MQ=255)
                                               ccAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagag                                               >  1:6139271‑M1/1‑46 (MQ=255)
                                               ccAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggcatggagtaacagtagag                                               >  1:2207860‑M1/1‑46 (MQ=255)
                                                  ggTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt                                            <  2:420600‑M1/93‑51 (MQ=255)
                                                  ggTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt                                            <  1:4581845‑M1/93‑51 (MQ=255)
                                                   gTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagtt                                           <  2:737145‑M1/93‑52 (MQ=255)
                                                   gTTGTGTTTTGGCAGCGCCAGGTTGCCTTCTAATACCCGGCGcccgagacccgcacgcgtcgccctgcaggtatggagaaacagtagagagtt                                           <  1:2275044‑M1/93‑52 (MQ=255)
                                                    ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagaggtg                                          >  2:1209093‑M1/1‑41 (MQ=255)
                                                      gtgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcg                                        >  2:5168482‑M1/1‑39 (MQ=255)
                                                      gtgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcg                                        <  1:2612530‑M1/93‑55 (MQ=255)
                                                         ttttGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgata                                     >  2:292822‑M1/1‑36 (MQ=255)
                                                          tttGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataa                                    <  1:1957382‑M1/93‑59 (MQ=255)
                                                          tttGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataa                                    <  1:5602871‑M1/93‑59 (MQ=255)
                                                           ttGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaa                                   <  1:4998036‑M1/93‑60 (MQ=255)
                                                             ggCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaa                                 <  1:4918628‑M1/93‑62 (MQ=255)
                                                                aGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcg                              >  2:4286989‑M1/1‑29 (MQ=255)
                                                                aGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcg                              <  2:5611507‑M1/93‑65 (MQ=255)
                                                                 gcgcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgt                             >  1:5440978‑M1/1‑28 (MQ=255)
                                                                  cgcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtc                            <  2:3018440‑M1/93‑67 (MQ=255)
                                                                  cgcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtc                            <  2:3336500‑M1/93‑67 (MQ=255)
                                                                   gcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtca                           <  2:2679261‑M1/93‑68 (MQ=255)
                                                                   gcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtca                           <  2:3962834‑M1/93‑68 (MQ=255)
                                                                    ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcag                          >  2:6024458‑M1/1‑25 (MQ=255)
                                                                    ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcag                          >  2:4281991‑M1/1‑25 (MQ=255)
                                                                    ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcag                          >  1:5247394‑M1/1‑25 (MQ=255)
                                                                     cAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcagg                         >  1:6220383‑M1/1‑24 (MQ=255)
                                                                     cAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcagg                         >  1:3281219‑M1/1‑24 (MQ=255)
                                                                      aGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggt                        >  2:535654‑M1/1‑23 (MQ=255)
                                                                      aGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggt                        <  2:5225633‑M1/93‑71 (MQ=255)
                                                                       ggTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggta                       >  1:4214976‑M1/1‑22 (MQ=255)
                                                                       ggTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggta                       <  1:1301996‑M1/93‑72 (MQ=255)
                                                                        gTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtag                      >  2:249836‑M1/1‑21 (MQ=255)
                                                                        gTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtag                      <  2:2015988‑M1/93‑73 (MQ=255)
                                                                         ttGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtagg                     <  2:2606729‑M1/93‑74 (MQ=255)
                                                                           ggCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggat                   <  1:5261343‑M1/93‑76 (MQ=255)
                                                                            gCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatc                  <  2:651281‑M1/93‑77 (MQ=255)
                                                                            gCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatc                  >  2:1949330‑M1/1‑17 (MQ=255)
                                                                            gCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatc                  >  2:3626214‑M1/1‑17 (MQ=255)
                                                                             cTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatcc                 >  1:5178503‑M1/1‑16 (MQ=255)
                                                                             cTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatcc                 >  1:5781562‑M1/1‑16 (MQ=255)
                                                                              ttCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagggagttgcgataaaaagcgtcagggaggatccg                >  2:272997‑M1/1‑15 (MQ=255)
                                                                               tCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgc               >  2:528350‑M1/1‑14 (MQ=255)
                                                                                 tAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgcta             <  2:6230986‑M1/93‑82 (MQ=255)
                                                                                  aaTACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaa            <  2:3460444‑M1/93‑83 (MQ=255)
                                                                                    tACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatc          >  2:4066103‑M1/1‑9 (MQ=255)
                                                                                        cggcGcgcgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttat      <  2:4843391‑M1/92‑89 (MQ=255)
                                                                                         ggCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatg     <  2:2393224‑M1/93‑90 (MQ=255)
                                                                                         ggCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatg     <  1:2567933‑M1/93‑90 (MQ=255)
                                                                                          gcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatgg    <  2:463827‑M1/93‑91 (MQ=255)
                                                                                          gcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatgg    <  1:5010915‑M1/93‑91 (MQ=255)
                                                                                          gcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatgg    >  2:1514120‑M1/1‑3 (MQ=255)
                                                                                            gcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggat  <  2:4612637‑M1/93‑93 (MQ=255)
                                                                                            gcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggat  <  1:3495413‑M1/93‑93 (MQ=255)
                                                                                            |                                                                                            
GCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC  >  NC_000913/66440‑66624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.