New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1832834 =216 (0.880)3 (0.010) 3/164 31.4 1.5% coding (3/708 nt) ydjZ hypothetical protein
?NC_000913 = 1832830 193 (0.880)intergenic (+13/‑2) ydjY/ydjZ hypothetical protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 224 total aligned reads displayed.

TAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCGCTGCTTCCCGG  >  NC_000913/1832742‑1832926
                                                                                            |                                                                                            
tAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGgatg                                                                                              <  1:5977623/93‑1 (MQ=255)
  aaTTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGgatgat                                                                                            <  1:3853050/93‑1 (MQ=255)
    ttCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGgatgatga                                                                                          <  2:3035283/93‑1 (MQ=255)
    ttCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGgatgatga                                                                                          <  1:2512303/93‑1 (MQ=255)
     tCAAAGGCAATGCCTCAGTTCTCCCGGCGGGTAACACGCTGGCAACGGTTGCCTTTAAAATTGCCGAATAAAGCCGGGGTAAGGgttgatgag                                                                                         >  2:5551489/1‑92 (MQ=255)
     tCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGgatgatgat                                                                                         <  1:5613940/93‑1 (MQ=255)
          ggCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGc                                                                                    <  2:4023080/93‑1 (MQ=255)
          ggCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGc                                                                                    <  1:2905770/93‑1 (MQ=255)
             aaTGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAAt                                                                                 <  1:940630/93‑1 (MQ=255)
             aaTGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAAt                                                                                 <  1:2900798/93‑1 (MQ=255)
              aTGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATc                                                                                <  1:2047300/93‑1 (MQ=255)
              aTGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATc                                                                                >  2:5901/1‑93 (MQ=255)
               tGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATcg                                                                               >  1:1538959/1‑93 (MQ=255)
                  cTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGa                                                                            >  2:5700919/1‑93 (MQ=255)
                  cTCAGTTCTCCCGGCGGATAACAAGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGAAGCAATCGCGa                                                                            >  1:4896576/1‑93 (MQ=255)
                   tCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGaa                                                                           >  1:3763696/1‑93 (MQ=255)
                   tCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAG‑‑‑GATGATGATGCAATCGCGaaaaa                                                                        >  2:4666732/1‑93 (MQ=255)
                    cAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGaaa                                                                          >  1:5915891/1‑93 (MQ=255)
                      gTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGaaaaa                                                                        >  1:3933669/1‑93 (MQ=255)
                      gTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGaaaaa                                                                        >  2:1621623/1‑93 (MQ=255)
                      gTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGaaaaa                                                                        >  2:1448585/1‑93 (MQ=255)
                         ctcCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCt                                                                     <  2:4300609/93‑1 (MQ=255)
                         ctcCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCt                                                                     <  1:1173811/93‑1 (MQ=255)
                           cccGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTgg                                                                   >  1:5489792/1‑93 (MQ=255)
                           cccGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTgg                                                                   >  2:3334578/1‑93 (MQ=255)
                             cggcggATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGta                                                                 >  1:5049526/1‑93 (MQ=255)
                              ggcggATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGtac                                                                <  1:3700797/93‑1 (MQ=255)
                                  gATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTAcc                                                            >  1:4231805/1‑93 (MQ=255)
                                  gATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTAcc                                                            >  1:1905704/1‑93 (MQ=255)
                                  gATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTAcc                                                            >  2:3676734/1‑93 (MQ=255)
                                  gATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTAcc                                                            >  1:6240348/1‑93 (MQ=255)
                                   aTAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCg                                                           >  1:4708305/1‑93 (MQ=255)
                                   aTAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCg                                                           <  1:1013929/93‑1 (MQ=255)
                                    tAACACGCTGGCAACGGTTACCTTTAAAATCGTCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGt                                                          >  1:3106022/1‑93 (MQ=255)
                                    tAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGt                                                          >  1:990889/1‑93 (MQ=255)
                                     aaCACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGta                                                         <  2:264153/93‑1 (MQ=255)
                                     aaCACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGta                                                         >  1:6126414/1‑93 (MQ=255)
                                     aaCACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGta                                                         >  2:3868483/1‑93 (MQ=255)
                                      acacGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGtat                                                        >  2:4799858/1‑93 (MQ=255)
                                       cacGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGtata                                                       >  2:44082/1‑93 (MQ=255)
                                        acGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATaa                                                      >  2:6284429/1‑93 (MQ=255)
                                           cTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAAccc                                                   >  2:3571962/1‑93 (MQ=255)
                                            tGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCt                                                  >  2:1898709/1‑93 (MQ=255)
                                              gCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCtca                                                >  1:1745139/1‑93 (MQ=255)
                                               cAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCtcat                                               <  1:4144568/93‑1 (MQ=255)
                                                aaCGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTCTAACCCtcata                                              >  2:1180561/1‑92 (MQ=255)
                                                aaCGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCtcatc                                              >  2:3139600/1‑93 (MQ=255)
                                                aaCGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCtcatc                                              >  1:1682147/1‑93 (MQ=255)
                                                aaCGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCtcatc                                              >  2:2192790/1‑93 (MQ=255)
                                                aaCGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCtcatc                                              <  1:6305912/93‑1 (MQ=255)
                                                aaCGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCtcatc                                              >  2:5238460/1‑93 (MQ=255)
                                                  cGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTcatcat                                            >  1:1516831/1‑93 (MQ=255)
                                                   ggTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCatcatc                                           >  1:1262710/1‑93 (MQ=255)
                                                    gTTACGTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACTGTATAACCCTCATCATcc                                          >  2:4104842/1‑93 (MQ=255)
                                                    gTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATcc                                          >  2:2537178/1‑93 (MQ=255)
                                                    gTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATcc                                          <  2:322207/93‑1 (MQ=255)
                                                    gTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATcc                                          >  2:1712674/1‑93 (MQ=255)
                                                     ttACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCt                                         <  2:6162857/93‑1 (MQ=255)
                                                      tACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtg                                        <  2:2117288/93‑1 (MQ=255)
                                                       aCCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgt                                       >  2:3427255/1‑93 (MQ=255)
                                                       aCCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgt                                       <  1:8836/93‑1 (MQ=255)
                                                       aCCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgt                                       >  2:5681076/1‑93 (MQ=255)
                                                       aCCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgt                                       <  1:4601812/93‑1 (MQ=255)
                                                        ccTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgtt                                      >  2:1540796/1‑93 (MQ=255)
                                                         cTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgttg                                     >  1:221183/1‑93 (MQ=255)
                                                         cTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgttg                                     >  2:452008/1‑93 (MQ=255)
                                                          tttAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgttgt                                    >  1:3474493/1‑93 (MQ=255)
                                                          tttAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCtgttgt                                    >  1:4803742/1‑93 (MQ=255)
                                                           ttAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTgttgtt                                   >  2:5616752/1‑93 (MQ=255)
                                                           ttAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTgttgtt                                   <  1:772623/93‑1 (MQ=255)
                                                            tAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTc                                  <  2:5985283/93‑1 (MQ=255)
                                                             aaaaTCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCg                                 <  1:4402394/93‑1 (MQ=255)
                                                              aaaTCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGc                                <  1:3538525/93‑1 (MQ=255)
                                                                aTCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTa                              <  2:1068988/93‑1 (MQ=255)
                                                                aTCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTa                              <  1:798045/93‑1 (MQ=255)
                                                                 tCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTAt                             >  1:4032506/1‑93 (MQ=255)
                                                                  cGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTAtg                            <  1:1104860/93‑1 (MQ=255)
                                                                   gCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTAtgc                           >  2:3042507/1‑93 (MQ=255)
                                                                     cGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTAtgctg                         >  1:2966542/1‑93 (MQ=255)
                                                                     cGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTAtgctg                         <  1:3406713/93‑1 (MQ=255)
                                                                      gAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTAtgctgc                        <  1:2816025/93‑1 (MQ=255)
                                                                      gAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTAtgctgc                        <  1:3330845/93‑1 (MQ=255)
                                                                      gAATAAAGCCAGCATAAAGGATGATTATGATTCAATCGCTAAAAATCTGGTACTACCGTATATCCCTCATCATCCTGTTGTTCGCTAtgctgc                        <  1:505611/93‑1 (MQ=255)
                                                                       aaTAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATgctgct                       >  2:5303470/1‑93 (MQ=255)
                                                                       aaTAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATgctgct                       >  1:51413/1‑93 (MQ=255)
                                                                         aaaaGCCAGGATAAAGTATAACTATGAGGCAATGGCGAAATATCTGGTGCTATCGTACAACCCTTCTCACCCTGTTGTTCGCTATGGTGCTgg                     <  2:4773883/92‑1 (MQ=255)
                                                                           aaGCCAGGATAAAGGATGATGATGATGCAATCGCCAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCa                   <  1:2620953/93‑1 (MQ=255)
                                                                              ccAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATgg                <  1:4779956/93‑1 (MQ=255)
                                                                              ccAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATgg                >  2:5798874/1‑93 (MQ=255)
                                                                               cAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATggg               >  2:4962753/1‑93 (MQ=255)
                                                                               cAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATggg               >  1:2739347/1‑93 (MQ=255)
                                                                                aGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGgc              >  1:1221540/1‑93 (MQ=255)
                                                                                 ggATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGgcg             >  1:5366021/1‑93 (MQ=255)
                                                                                  gATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGgcgc            >  2:2352911/1‑93 (MQ=255)
                                                                                   aTAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCgct           >  2:328262/1‑93 (MQ=255)
                                                                                    tAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCgctg          >  1:6210360/1‑93 (MQ=255)
                                                                                      aaGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCgctgct        >  1:2724918/1‑93 (MQ=255)
                                                                                           tgatgatgatgCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCCTGGGCGCTGCTTCCCg   >  2:2883852/1‑93 (MQ=255)
                                                                                            gatgatgatgCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCGCTGCTTCCCgg  <  2:432090/93‑1 (MQ=255)
                                                                                            gatgatgatgCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCGCTGCTTCCCgg  >  2:6172557/1‑93 (MQ=255)
                                                                                            |                                                                                            
TAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAAAGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCGCTGCTTCCCGG  >  NC_000913/1832742‑1832926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.