| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,968,317 | +CGT | coding (612/1170 nt) | wecB → | UDP‑N‑acetyl glucosamine ‑2‑epimerase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3968317 | 1 (0.000) | 265 (1.120) +CGT |
131/178 | 0.1 | 99.6% | coding (612/1170 nt) | wecB | UDP‑N‑acetyl glucosamine ‑2‑epimerase |
| ? | NC_000913 | 3968318 = | 1 (0.000) | coding (613/1170 nt) | wecB | UDP‑N‑acetyl glucosamine ‑2‑epimerase | |||||
Only 100 of 277 total aligned reads displayed.
AACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGC > NC_000913/3968225‑3968407 | aaCGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTg > 2:3473048/1‑93 (MQ=255)aaCGTTGCGGATAGCCGAATCTTCATTACCCGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGCCAAGCTg > 2:38586/1‑93 (MQ=255) aCGTTGCGGATAGCGTAATCTTAATTCCCGGTAATACAGTCATTGATGCCCTGTGATGGGTGCGTGACGGGGTGATGACAAGCGACAAGGTgc < 2:3594815/93‑2 (MQ=255) aCGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGc < 2:967105‑M1/93‑2 (MQ=255) cGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcg < 2:2524317‑M1/93‑3 (MQ=255) gTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgt > 1:1103871‑M1/1‑90 (MQ=255) ggATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcaga < 1:4457573‑M1/93‑9 (MQ=255) gATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCATCGACAAGCTGcgttcagaa < 2:5948912‑M1/93‑10 (MQ=255) tAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaact < 2:1140659‑M1/93‑12 (MQ=255) aGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactg > 2:1650060‑M1/1‑81 (MQ=255) aGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactg < 1:3449518‑M1/93‑13 (MQ=255) gCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactgg > 1:968656‑M1/1‑80 (MQ=255) gCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactgg > 1:1208840‑M1/1‑80 (MQ=255) gCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactgg > 2:4839173‑M1/1‑80 (MQ=255) gCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactgg > 2:4478219‑M1/1‑80 (MQ=255) cGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcg < 1:1331269‑M1/93‑16 (MQ=255) aaTCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggc > 2:5187673‑M1/1‑76 (MQ=255) aTCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggca > 2:3019268‑M1/1‑75 (MQ=255) cTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaa < 2:2558795‑M1/93‑21 (MQ=255) cTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaa < 1:2460830‑M1/93‑21 (MQ=255) ttCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaat > 2:1048589‑M1/1‑72 (MQ=255) ttCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaat < 2:2321899‑M1/93‑22 (MQ=255) ttCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaat < 2:5103577‑M1/93‑22 (MQ=255) tCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaatt > 2:1550914‑M1/1‑71 (MQ=255) cATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaatta < 1:4037819‑M1/93‑24 (MQ=255) cATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaatta < 1:291368‑M1/93‑24 (MQ=255) aTTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattac > 2:1416567‑M1/1‑69 (MQ=255) ttACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacc > 1:3744529‑M1/1‑68 (MQ=255) tACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattaccc < 2:2072975‑M1/93‑27 (MQ=255) tACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattaccc < 1:143578‑M1/93‑27 (MQ=255) tACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattaccc < 2:4751324‑M1/93‑27 (MQ=255) tACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggaaaattacac > 2:719309‑M1/1‑67 (MQ=255) cGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtt < 2:3968549‑M1/93‑30 (MQ=255) cGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgct > 1:1844370‑M1/1‑64 (MQ=255) ggTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGCGCAGCGACAACCTGcgttcagaactggcggcacattacccgttt > 2:4525480‑M1/1‑63 (MQ=255) ggTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgttt < 2:5471829‑M1/93‑31 (MQ=255) gTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgttta < 1:165897‑M1/93‑32 (MQ=255) gTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgttta > 2:41542‑M1/1‑62 (MQ=255) tAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttat < 2:3548638‑M1/93‑33 (MQ=255) aaTACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatc < 2:6302004‑M1/93‑34 (MQ=255) aTACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcg > 2:3278272‑M1/1‑59 (MQ=255) gTCATTGATGCACTGTTATGGGTGCGTGACCAGGTAATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgacccc < 1:5659189‑M1/93‑40 (MQ=255) cATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccga > 1:1439985‑M1/1‑52 (MQ=255) cATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccga < 1:5299898‑M1/93‑42 (MQ=255) cATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccga > 1:3621176‑M1/1‑52 (MQ=255) cATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccga > 1:3245244‑M1/1‑52 (MQ=255) aTTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgat > 2:1093006‑M1/1‑51 (MQ=255) aTTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgat > 1:3340267‑M1/1‑51 (MQ=255) aTTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgat > 1:2980292‑M1/1‑51 (MQ=255) ttGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgata > 1:621303‑M1/1‑50 (MQ=255) ttGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgata < 2:814755‑M1/93‑44 (MQ=255) tGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataa > 2:2906439‑M1/1‑49 (MQ=255) aTGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaa > 2:564388‑M1/1‑47 (MQ=255) tGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaa < 2:6094231‑M1/93‑48 (MQ=255) cACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaaga < 1:5019517‑M1/93‑50 (MQ=255) aCTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagat > 1:1696411‑M1/1‑43 (MQ=255) aCTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagat < 2:2822209‑M1/93‑51 (MQ=255) aCTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagat < 2:5692061‑M1/93‑51 (MQ=255) cTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatg < 2:4033844‑M1/93‑52 (MQ=255) cTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatg > 1:2222514‑M1/1‑42 (MQ=255) tGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattgcccgtttatcgaccccgataaaaagatga < 1:3209705‑M1/93‑53 (MQ=255) gTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgat > 2:2391909‑M1/1‑40 (MQ=255) gTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgat > 1:5332717‑M1/1‑40 (MQ=255) tATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattc < 1:6261724‑M1/93‑56 (MQ=255) aTGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattct < 1:5451706‑M1/93‑57 (MQ=255) aTGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattct < 1:3990454‑M1/93‑57 (MQ=255) tGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctg > 2:4493080‑M1/1‑36 (MQ=255) ggTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggt > 2:317789‑M1/1‑34 (MQ=255) ggTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggt < 2:5839930‑M1/93‑60 (MQ=255) ggTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggt < 1:870594‑M1/93‑60 (MQ=255) gTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtg < 1:5070637‑M1/93‑61 (MQ=255) cGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgacc > 2:2238905‑M1/1‑30 (MQ=255) gTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccg > 1:5759173‑M1/1‑29 (MQ=255) gTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccg < 2:4286334‑M1/93‑65 (MQ=255) gTGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccg < 1:5219490‑M1/93‑65 (MQ=255) tGACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccgg > 1:3646202‑M1/1‑28 (MQ=255) gACCAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggt < 2:5196685‑M1/93‑67 (MQ=255) cAGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcac > 1:4628843‑M1/1‑24 (MQ=255) aGGTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcaca < 2:2215297‑M1/93‑71 (MQ=255) ggTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacag > 1:48428‑M1/1‑22 (MQ=255) gTGATGAGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacagg > 1:4955532‑M1/1‑21 (MQ=255) tgatgaGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggc < 1:4292758‑M1/93‑74 (MQ=255) gatgaGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcg < 2:5040416‑M1/93‑75 (MQ=255) tgaGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtg > 2:3750684‑M1/1‑17 (MQ=255) gaGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtga < 2:4570241‑M1/93‑78 (MQ=255) gaGCAGCGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtga < 2:5607563‑M1/93‑78 (MQ=255) gcagcGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgaga > 1:39102‑M1/1‑14 (MQ=255) cagcGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagag < 1:3606206‑M1/93‑81 (MQ=255) gcGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtt < 2:3199630‑M1/93‑83 (MQ=255) cGACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagttt < 2:1871485‑M1/93‑84 (MQ=255) gACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttc < 1:5967767‑M1/93‑85 (MQ=255) gACAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttc > 1:2003568‑M1/1‑9 (MQ=255) aCAAGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttcg > 1:1071506‑M1/1‑8 (MQ=255) aaGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttcggt < 1:2117710‑M1/93‑88 (MQ=255) aGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttcggtc < 2:5290923‑M1/93‑89 (MQ=255) aGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttcggtc < 2:2572581‑M1/93‑89 (MQ=255) aGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttcggtc < 1:4582494‑M1/93‑89 (MQ=255) aGCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttcggtc > 1:2586098‑M1/1‑5 (MQ=255) gCTGcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgtgagagtttaggtcg < 1:2256890‑M1/93‑90 (MQ=255) cTGcgtgcagaacgggcggcaaattacccgtgtatcgaccgcgataaaaagatgattctggtgagcggtcacaggcgtgagagtttcggtcgt < 2:2807076‑M1/93‑91 (MQ=255) | AACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGC > NC_000913/3968225‑3968407 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |