New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 365527 =0 (0.000)250 (1.050) 122/178 0.2 73.8% coding (3/3075 nt) lacZ beta‑D‑galactosidase
?NC_000913 4589230 = 178 (0.750)coding (4/1656 nt) tsr methyl‑accepting chemotaxis protein I

Only 100 of 450 total aligned reads displayed.

ATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCC  >  NC_000913/4589138‑4589322
                                                                                            |                                                                                            
ttaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgt                                                                                              >  1:3792692‑M2/93‑93 (MQ=255)
   cACTCGGCGTAATCTCCGCGGGCTATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaa                                                                                           >  1:697767/1‑93 (MQ=255)
      accccagggtttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAAc                                                                                        >  2:6127194‑M2/87‑93 (MQ=255)
       cGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACg                                                                                       >  2:4231675/1‑93 (MQ=255)
        cccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGt                                                                                      <  2:2184273‑M2/9‑1 (MQ=255)
         gCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTa                                                                                     <  2:2352243/93‑1 (MQ=255)
          caggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTAt                                                                                    >  1:4064636‑M2/83‑93 (MQ=255)
           aggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATc                                                                                   >  1:6004385‑M2/82‑93 (MQ=255)
            ggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCa                                                                                  >  1:2239002‑M2/81‑93 (MQ=255)
             aaTCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCaa                                                                                 <  1:420670/93‑1 (MQ=255)
              ctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaa                                                                                >  1:3570317‑M2/79‑93 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               >  2:3723283‑M2/78‑93 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               <  2:2474129‑M2/16‑1 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               >  2:546672‑M2/78‑93 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               <  1:2406177‑M2/16‑1 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               >  1:2555103‑M2/78‑93 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               >  2:4091413‑M2/78‑93 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               <  2:5917006‑M2/16‑1 (MQ=255)
                ttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAAt                                                                              <  1:3026586‑M2/17‑1 (MQ=255)
                 tacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAAtt                                                                             >  2:1101476‑M2/76‑93 (MQ=255)
                 tacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAAtt                                                                             <  1:5770393‑M2/18‑1 (MQ=255)
                  acactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATtg                                                                            >  1:3200723‑M2/75‑93 (MQ=255)
                    gcgGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgtg                                                                          >  2:1346808/1‑93 (MQ=255)
                     ctttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGa                                                                         <  1:940754‑M2/22‑1 (MQ=255)
                     ctttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGa                                                                         <  2:4558163‑M2/22‑1 (MQ=255)
                      gggATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAc                                                                        <  1:1172805/93‑1 (MQ=255)
                       ggATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAcc                                                                       >  2:1215987/1‑93 (MQ=255)
                       ggATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAcc                                                                       <  1:1077529/93‑1 (MQ=255)
                       ggATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAca                                                                       >  1:1807646/1‑92 (MQ=255)
                        gATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCa                                                                      >  2:3518219/1‑93 (MQ=255)
                            ttCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCtt                                                                  <  2:5740756/93‑1 (MQ=255)
                            ttCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCtt                                                                  >  1:1557970/1‑93 (MQ=255)
                            ttCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCtt                                                                  <  1:4848423/93‑1 (MQ=255)
                             ttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTa                                                                 >  2:4829139‑M2/64‑93 (MQ=255)
                               ccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTAct                                                               <  2:912210‑M2/32‑1 (MQ=255)
                               aTAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAct                                                               <  2:3429688/93‑1 (MQ=255)
                               aTAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAct                                                               >  1:5924379/1‑93 (MQ=255)
                                tAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActg                                                              >  2:2746627/1‑93 (MQ=255)
                                tAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActg                                                              >  1:4692921/1‑93 (MQ=255)
                                cggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTActg                                                              >  2:4612093‑M2/61‑93 (MQ=255)
                                cggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTActg                                                              >  1:1454190‑M2/61‑93 (MQ=255)
                                 ggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTActgc                                                             <  1:4786586‑M2/34‑1 (MQ=255)
                                 aaaGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActgc                                                             >  1:4542388/1‑93 (MQ=255)
                                  gctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTActgct                                                            <  2:3872575‑M2/35‑1 (MQ=255)
                                   ctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTActgctg                                                           <  2:1702684‑M2/36‑1 (MQ=255)
                                    tcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg                                                          <  1:5071756‑M2/37‑1 (MQ=255)
                                      gtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGtt                                                        <  2:5219939‑M2/39‑1 (MQ=255)
                                              tgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGt                                                >  2:2787693‑M2/47‑93 (MQ=255)
                                               ccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGTTGGTTTTGGCCGtt                                               >  1:891041/1‑93 (MQ=255)
                                                cAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGttt                                              >  1:562136/1‑93 (MQ=255)
                                                cAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGttt                                              >  1:6284574/1‑93 (MQ=255)
                                                 aGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGtttt                                             >  2:5013085/1‑93 (MQ=255)
                                                 aGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGtttt                                             <  2:1804959/93‑1 (MQ=255)
                                                 aGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGtttt                                             <  2:2310906/93‑1 (MQ=255)
                                                  ggCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGttttt                                            >  2:5611933/1‑93 (MQ=255)
                                                     ttgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGc                                         >  2:6261954‑M2/40‑93 (MQ=255)
                                                      gAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGcc                                        >  1:5551810/1‑93 (MQ=255)
                                                         gagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCttt                                     >  1:802639‑M2/36‑93 (MQ=255)
                                                          agcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCtttt                                    <  1:1012197‑M2/59‑1 (MQ=255)
                                                          agcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCtttt                                    >  1:2804146‑M2/35‑93 (MQ=255)
                                                               gCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAAc                               >  2:3166267/1‑93 (MQ=255)
                                                               ataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAAc                               <  2:1621751‑M2/64‑1 (MQ=255)
                                                               ataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAAc                               >  2:5110528‑M2/30‑93 (MQ=255)
                                                                taacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACt                              >  1:6072945‑M2/29‑93 (MQ=255)
                                                                 aacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTg                             >  1:2265332‑M2/28‑93 (MQ=255)
                                                                 aTCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTg                             >  1:5234987/1‑93 (MQ=255)
                                                                 aTCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTg                             >  1:3411906/1‑93 (MQ=255)
                                                                  tCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGa                            >  1:3334746/1‑93 (MQ=255)
                                                                  acaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGa                            <  1:3861709‑M2/67‑1 (MQ=255)
                                                                   cGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGAc                           <  2:1586429/93‑1 (MQ=255)
                                                                       ttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCa                       <  1:4273990‑M2/72‑1 (MQ=255)
                                                                       ccACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCa                       >  2:2122801/1‑93 (MQ=255)
                                                                        tcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAg                      <  1:2113762‑M2/73‑1 (MQ=255)
                                                                          acacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGc                    <  2:2265333‑M2/75‑1 (MQ=255)
                                                                            ggAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCgg                  >  2:4960127/1‑93 (MQ=255)
                                                                            ggAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCgg                  >  1:192607/1‑93 (MQ=255)
                                                                            ggAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCgg                  >  1:4394862/1‑93 (MQ=255)
                                                                             gAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGt                 >  1:4123848/1‑93 (MQ=255)
                                                                             caggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGt                 >  1:2880408‑M2/16‑93 (MQ=255)
                                                                             caggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGt                 <  2:4403245‑M2/78‑1 (MQ=255)
                                                                             caggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGt                 >  1:263260‑M2/16‑93 (MQ=255)
                                                                              aggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTc                <  2:5534424‑M2/79‑1 (MQ=255)
                                                                              aaaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTc                >  1:1866393/1‑93 (MQ=255)
                                                                              aaaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTc                <  2:3618514/93‑1 (MQ=255)
                                                                              aaaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTc                >  2:2048751/1‑93 (MQ=255)
                                                                                gaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTg              <  2:596712‑M2/81‑1 (MQ=255)
                                                                                agagAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGATTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTg              >  1:3899945/1‑93 (MQ=255)
                                                                                 gagaAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGt             >  2:766112/1‑93 (MQ=255)
                                                                                  aacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGtt            >  1:5413432‑M2/11‑93 (MQ=255)
                                                                                   gaAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTc           >  1:1955619/1‑93 (MQ=255)
                                                                                    aaaCCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCt          <  2:2599886/93‑1 (MQ=255)
                                                                                     agctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCtt         >  1:4979926‑M2/8‑93 (MQ=255)
                                                                                     aaCCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTAGAACTGACATCAGGCGGTCTGTTCtt         >  2:3993882/1‑93 (MQ=255)
                                                                                      gctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCttt        >  1:1256741‑M2/7‑93 (MQ=255)
                                                                                      aCCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCttt        >  1:3657460/1‑93 (MQ=255)
                                                                                         atgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAAt     >  2:296688‑M2/4‑93 (MQ=255)
                                                                                          tgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATg    >  2:3262773‑M2/3‑93 (MQ=255)
                                                                                          tgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATg    <  2:146671‑M2/91‑1 (MQ=255)
                                                                                           gTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGc   <  2:4751219‑M2/92‑1 (MQ=255)
                                                                                            ttAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGcc  <  2:1936665/93‑1 (MQ=255)
                                                                                            |                                                                                            
ATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCC  >  NC_000913/4589138‑4589322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.