New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3349258 =19 (0.080)282 (1.150) 137/184 0.0 93.7% coding (1403/2331 nt) arcB aerobic respiration sensor‑response protein
?NC_000913 = 3349263 NA (NA)coding (1398/2331 nt) arcB aerobic respiration sensor‑response protein

Only 100 of 288 total aligned reads displayed.

AAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTC  >  NC_000913/3349171‑3349355
                                                                                            |                                                                                            
aaGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTg                                                                                              >  1:1667084/1‑93 (MQ=255)
 aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTgg                                                                                             >  1:1041370‑M1/87‑93 (MQ=255)
 aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTgg                                                                                             >  1:1424485‑M1/87‑93 (MQ=255)
 aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTgg                                                                                             <  2:1613502‑M1/7‑1 (MQ=255)
 aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTgg                                                                                             <  2:6184916‑M1/7‑1 (MQ=255)
   cctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaatacctgtgCCGGTGGCa                                                                                           >  1:3402297‑M1/85‑93 (MQ=255)
   cctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCa                                                                                           >  2:5227055‑M1/85‑93 (MQ=255)
     tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                         <  2:1026937‑M1/11‑1 (MQ=255)
     tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                         <  2:494268‑M1/11‑1 (MQ=255)
     tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                         <  2:2581139‑M1/11‑1 (MQ=255)
        gccgtgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt                                                                                      >  2:4037959‑M1/80‑93 (MQ=255)
        gccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt                                                                                      <  2:1394553‑M1/14‑1 (MQ=255)
          cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    <  2:4194797‑M1/16‑1 (MQ=255)
          cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    <  2:399268‑M1/16‑1 (MQ=255)
          cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    <  1:1749796‑M1/16‑1 (MQ=255)
           ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc                                                                                   <  1:6035946‑M1/17‑1 (MQ=255)
           ctgttcgctggtaaccgtaatatcgcagcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGATTAcc                                                                                   <  1:278072‑M1/17‑1 (MQ=255)
            tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCg                                                                                  <  1:4603184‑M1/18‑1 (MQ=255)
             gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGc                                                                                 <  1:3992295‑M1/19‑1 (MQ=255)
             gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGc                                                                                 >  1:4524981‑M1/75‑93 (MQ=255)
             gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGc                                                                                 <  1:2232585‑M1/19‑1 (MQ=255)
              ttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGcc                                                                                <  1:4279028‑M1/20‑1 (MQ=255)
               tcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCa                                                                               <  2:2379827‑M1/21‑1 (MQ=255)
                 gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACAGCCATg                                                                             <  2:4600405‑M1/23‑1 (MQ=255)
                   tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGAc                                                                           <  1:1568513‑M1/25‑1 (MQ=255)
                       aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTc                                                                       >  1:1857390‑M1/65‑93 (MQ=255)
                        accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                      <  2:3637345‑M1/30‑1 (MQ=255)
                        accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                      >  2:5727289‑M1/64‑93 (MQ=255)
                        accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                      >  1:2333542‑M1/64‑93 (MQ=255)
                         ccgtaataccgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCtt                                                                     >  2:5036153‑M1/63‑93 (MQ=255)
                          cgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCttt                                                                    <  2:1189385‑M1/32‑1 (MQ=255)
                              atatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc                                                                >  1:1794841‑M1/58‑93 (MQ=255)
                              atatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc                                                                >  1:6087423‑M1/58‑93 (MQ=255)
                              atatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc                                                                <  1:5787197‑M1/36‑1 (MQ=255)
                               tatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt                                                               <  2:2502900‑M1/37‑1 (MQ=255)
                               tatccccgcccatatttttcgctagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt                                                               >  2:3247213‑M1/57‑93 (MQ=255)
                                 tcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTgg                                                             >  1:2711555‑M1/55‑93 (MQ=255)
                                  cgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGt                                                            >  2:664693‑M1/54‑93 (MQ=255)
                                   gccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTa                                                           <  1:3215774‑M1/41‑1 (MQ=255)
                                   gccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTa                                                           <  2:4837140‑M1/41‑1 (MQ=255)
                                      gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa                                                        >  2:5508470‑M1/50‑93 (MQ=255)
                                      gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa                                                        <  2:5910777‑M1/44‑1 (MQ=255)
                                       cccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATAc                                                       <  1:2587611‑M1/45‑1 (MQ=255)
                                        ccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACa                                                      >  1:835666‑M1/48‑93 (MQ=255)
                                         catatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                     <  2:4751403‑M1/47‑1 (MQ=255)
                                         catatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                     <  2:5292811‑M1/47‑1 (MQ=255)
                                          atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg                                                    <  1:3148935‑M1/48‑1 (MQ=255)
                                          atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg                                                    >  1:4693564‑M1/46‑93 (MQ=255)
                                           tatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTTACCTGGTAATACATgg                                                   <  1:5490715‑M1/49‑1 (MQ=255)
                                             tttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCg                                                 <  2:3772534‑M1/51‑1 (MQ=255)
                                                   gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtt                                           <  1:3846484‑M1/57‑1 (MQ=255)
                                                   gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtt                                           <  2:2717065‑M1/57‑1 (MQ=255)
                                                    ccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACNNGGTAATACATGGCGNAAAntt                                          <  1:2424828‑M1/58‑1 (MQ=255)
                                                      agacgacgagaaacgtccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        >  2:2075557‑M1/34‑93 (MQ=255)
                                                      agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        <  1:5303377‑M1/60‑1 (MQ=255)
                                                      agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        <  1:2138663‑M1/60‑1 (MQ=255)
                                                        acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                      >  1:3795605‑M1/32‑93 (MQ=255)
                                                         cgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATcc                                     >  2:6041640‑M1/31‑93 (MQ=255)
                                                         cgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATcc                                     >  2:1926522‑M1/31‑93 (MQ=255)
                                                         cgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATcc                                     >  1:2910666‑M1/31‑93 (MQ=255)
                                                          gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                                    >  2:1465075‑M1/30‑93 (MQ=255)
                                                           acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCAAAAATTTTATCCAg                                   <  2:3068848‑M1/65‑1 (MQ=255)
                                                            cgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc                                  >  2:2192141‑M1/28‑93 (MQ=255)
                                                             gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCt                                 <  2:1982866‑M1/67‑1 (MQ=255)
                                                                aaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCAt                              >  1:4858728‑M1/24‑93 (MQ=255)
                                                                 aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                             >  2:6127872‑M1/23‑93 (MQ=255)
                                                                 aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                             >  1:786781‑M1/23‑93 (MQ=255)
                                                                 aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                             >  1:6260566‑M1/23‑93 (MQ=255)
                                                                  acggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATcc                            >  1:1131268‑M1/22‑93 (MQ=255)
                                                                  acggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATcc                            <  2:2905127‑M1/72‑1 (MQ=255)
                                                                  acggccagaccaataccggtgCCGGTGCCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATcc                            <  1:3887719‑M1/72‑1 (MQ=255)
                                                                   cggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCt                           >  2:3369893‑M1/21‑93 (MQ=255)
                                                                   cggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCt                           >  2:716777‑M1/21‑93 (MQ=255)
                                                                   cggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCt                           >  2:1831215‑M1/21‑93 (MQ=255)
                                                                    ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTg                          <  1:3537928‑M1/74‑1 (MQ=255)
                                                                     gccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGc                         <  1:3068077‑M1/75‑1 (MQ=255)
                                                                      ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                        >  2:4475823‑M1/18‑93 (MQ=255)
                                                                       cagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCgg                       >  1:714204‑M1/17‑93 (MQ=255)
                                                                         gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                     >  2:882657‑M1/15‑93 (MQ=255)
                                                                         gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                     >  1:5237113‑M1/15‑93 (MQ=255)
                                                                         gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                     >  2:3102989‑M1/15‑93 (MQ=255)
                                                                          accaatcccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                    >  2:6237823‑M1/14‑93 (MQ=255)
                                                                          accaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTTACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                    >  1:871328‑M1/14‑93 (MQ=255)
                                                                          accaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                    <  1:3508104‑M1/80‑1 (MQ=255)
                                                                           ccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATg                   >  1:208176‑M1/13‑93 (MQ=255)
                                                                             aataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCAGACTGcc                 <  2:2963671‑M1/83‑1 (MQ=255)
                                                                               taccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGa               <  1:497361‑M1/85‑1 (MQ=255)
                                                                                 ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATa             >  2:3515202‑M1/7‑93 (MQ=255)
                                                                                 ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATa             >  1:2028552‑M1/7‑93 (MQ=255)
                                                                                 ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATa             >  2:3925610‑M1/7‑93 (MQ=255)
                                                                                   ggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAcc           <  2:5771973‑M1/89‑1 (MQ=255)
                                                                                   ggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAcc           >  1:5678756‑M1/5‑93 (MQ=255)
                                                                                    gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa          >  2:3194285‑M1/4‑93 (MQ=255)
                                                                                     tgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCag         <  2:5614644‑M1/91‑1 (MQ=255)
                                                                                      gCCGTTGGCAGGTTTACCGCCATGACTGTCTTGCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCaga        >  2:6001861‑M1/2‑93 (MQ=255)
                                                                                      gCCGGTGGCAGTTTTACCGCCTTGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCaga        >  2:4845671‑M1/2‑93 (MQ=255)
                                                                                       ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag       <  2:764253/93‑1 (MQ=255)
                                                                                        cGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCAATACCAGAGt      <  1:5571747/93‑1 (MQ=255)
                                                                                          gTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCt    >  1:3360738/1‑93 (MQ=255)
                                                                                            ggCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTc  >  2:5849404/1‑93 (MQ=255)
                                                                                            |                                                                                            
AAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTC  >  NC_000913/3349171‑3349355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.