| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,620,321 | 0 | T | C | 52.4% | 84.5 / inf | 453 | C1167R (TGC→CGC) | rhsB | RhsB |
| Reads supporting (aligned to +/- strand): ref base T (111/103); new base C (104/132); total (218/235) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 493 total aligned reads displayed.
TGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTAT > NC_000913/3620229‑3620410 | tgtACACGCCGGCGCGAAAAATCCACCTGTACCCCTGCGACCATCGCGGCCTGCCGCTGGAGCTCATCAGCACGGAAGGGGCAACAGCgtggt > 1:2630026/1‑93 (MQ=255)tgtACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCgtggt > 1:5646370/1‑93 (MQ=255) gtACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCgtggtg < 2:1379081/93‑1 (MQ=255) tACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCGCGGAAGGGGCAACAGCGTGGTgc < 1:5999374/93‑1 (MQ=255) tACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGgcgc > 1:3881585/1‑93 (MQ=255) tACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGgcgc > 1:1638299/1‑93 (MQ=255) cacGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGCGGTgcgc > 2:2668598/1‑93 (MQ=255) ccGCCGGCGCGAAAAACCCCCCTGTCCCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCa < 2:4517196/92‑1 (MQ=17) cGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAg > 2:4433100/1‑93 (MQ=255) gCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGa < 1:3620273/93‑1 (MQ=255) cccGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGa < 1:3927842/92‑1 (MQ=255) cGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAat > 1:4506572/1‑93 (MQ=255) ggCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAata > 2:5849868/1‑93 (MQ=255) ggCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAata > 2:4976541/1‑93 (MQ=255) ggCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAata < 1:1386458/93‑1 (MQ=255) cgcgAAAAATCCACCTGTACCACTGCGCCCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATatg < 2:1303307/93‑1 (MQ=255) gcgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATatga < 2:3058003/93‑1 (MQ=255) gcgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATatga > 1:3331220/1‑93 (MQ=255) gcgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATatga > 2:40255/1‑93 (MQ=255) cgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATatgat > 1:2746975/1‑93 (MQ=255) gAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATatgatg > 2:5372623/1‑93 (MQ=255) gAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATatgatg > 1:6065330/1‑93 (MQ=255) gAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATatgatg < 1:205431/93‑1 (MQ=255) gAAAAATCCACCTGTACCACTGCGACCATCGCGCCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATatgatg < 1:426275/93‑1 (MQ=255) aaaaTCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGaa > 2:3172533/1‑93 (MQ=255) aaaaTCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGaa < 2:3818893/93‑1 (MQ=255) aaaaCCCCCCTGTCCCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGaa < 1:1310251/93‑1 (MQ=17) aaaaCCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGaa < 2:3586099/93‑1 (MQ=255) actCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATg < 1:201463/91‑1 (MQ=255) aaTCCTCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATg < 2:2593018/93‑1 (MQ=255) aaTCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATg < 1:6029789/93‑1 (MQ=255) aTCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATgg < 2:2770144/93‑1 (MQ=255) tCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATggg > 2:3625267/1‑93 (MQ=255) tCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATggg > 1:5566298/1‑93 (MQ=255) tCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATggg > 1:5481165/1‑93 (MQ=255) accACCGGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATggg < 2:1447024/92‑1 (MQ=255) cACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGc < 1:5908204/93‑1 (MQ=255) aCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGGGCTCATTAGCACGGAACGGGCAACAGAGTGGCGCGCAGAATATGATGAATGGGGCa > 2:1030267/1‑93 (MQ=14) cTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAAc < 2:806848/93‑1 (MQ=255) aCCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACctgc < 2:4664588/93‑1 (MQ=255) ccACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACctgct > 1:2112368/1‑93 (MQ=255) tGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCtgagt < 2:697256/93‑3 (MQ=255) tGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCtgaat > 1:5440126/1‑93 (MQ=255) gCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCtgaatg > 2:2869157/1‑93 (MQ=255) gACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCtgagtgat > 2:3740832/1‑92 (MQ=255) gACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCtgaatgaa < 1:1570054/93‑1 (MQ=255) aCCATCGCGTCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCtgagtgatg < 1:311157/93‑3 (MQ=255) aCCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCtgagtgatg > 2:1191505/1‑91 (MQ=255) ccATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGtgatga > 2:5116736/1‑93 (MQ=255) ccATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGtgatga < 2:6254374/93‑1 (MQ=255) ccATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGtgatga < 1:5286482/93‑1 (MQ=255) aTCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAgaga > 1:3508454/1‑93 (MQ=255) aTCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAgaga > 2:3395703/1‑93 (MQ=255) cgcgGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAAc < 2:5534182/93‑1 (MQ=255) cgGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAAccc < 1:3809722/93‑1 (MQ=255) cgGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAAccc > 2:5655330/1‑93 (MQ=255) ggCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCg > 1:845106/1‑93 (MQ=255) ggCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCg > 1:4048532/1‑93 (MQ=255) gCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGc > 1:1075313/1‑93 (MQ=255) gCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGc > 1:1726226/1‑93 (MQ=255) gCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGc > 1:5812701/1‑93 (MQ=255) gCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGc > 1:4867384/1‑93 (MQ=255) tGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATc > 1:2481334/1‑93 (MQ=255) tGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATc < 2:4692323/93‑1 (MQ=255) gCCGCTGGCGCTCATCAGCACGCAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCa < 1:5077000/93‑1 (MQ=255) ccGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAg < 1:730430/93‑1 (MQ=255) cGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCatc > 2:3937777/1‑91 (MQ=255) cTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTg < 1:4756500/93‑1 (MQ=17) tGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgc > 2:1948040/1‑93 (MQ=255) tGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgc > 2:4908661/1‑93 (MQ=255) gcgcTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCACCCTGCTGAATGAAGAGAACCCGCATCAGCTgcag < 2:2982881/93‑1 (MQ=255) gcTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgcagca < 2:183677/93‑1 (MQ=255) cTCATCAGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAATCTGCTGAATGAAGAGAACCCGCATCAGCTGcagcag > 2:4554486/1‑93 (MQ=255) tcatcaGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCagcagc > 1:1929195/1‑93 (MQ=255) catcaGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCt > 2:6118320/1‑93 (MQ=255) catcaGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCt > 2:4113152/1‑93 (MQ=255) aGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCAtt < 1:2445404/93‑2 (MQ=14) aGCACGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATc < 2:1562522/93‑1 (MQ=255) cGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCgcc > 1:1028602/1‑91 (MQ=14) cGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGc > 1:2213757/1‑93 (MQ=255) cGGAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGc < 1:6236606/93‑1 (MQ=255) gAAGGGGCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTg > 1:2811542/1‑93 (MQ=255) aaGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGc > 1:5343596/1‑93 (MQ=14) aaGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGc < 1:2354030/93‑1 (MQ=11) ggggCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCg < 2:1755599/93‑1 (MQ=11) ggggCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCg > 2:2461964/1‑93 (MQ=14) ggggCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCg > 2:2268710/1‑93 (MQ=14) gggCAACAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCgg > 2:3512193/1‑93 (MQ=255) cAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCgggtc > 1:1882838/1‑91 (MQ=14) cAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCgggtc < 2:5793155/93‑3 (MQ=11) aCAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGgcag > 2:4260411/1‑93 (MQ=255) cAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGgcagc > 2:2136460/1‑93 (MQ=255) cAGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGgcagc < 1:1540335/93‑1 (MQ=255) aGCGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGgcagca > 2:600801/1‑93 (MQ=255) cGTGGCGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGt < 2:4763460/93‑1 (MQ=255) gtggtgCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGACCCCGCATCATCTGCAGCAGCTCATTCGCCTGCCGGGTCAGCAGTa < 2:923905/93‑1 (MQ=1) gtggtgCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCGGGTCAGCAGTa > 1:3198599/1‑93 (MQ=11) gtggtgCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCGGGTCAGCAGTa < 2:1109495/93‑1 (MQ=1) gtggcgCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTa > 1:3718153/1‑93 (MQ=255) tggcgCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTat < 1:4374687/93‑1 (MQ=255) | TGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTAT > NC_000913/3620229‑3620410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |