BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,289,431	T→C	G150G (GGT→GGC)	yraK →	putative fimbrial protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,289,431	0	T	C	100.0%	850.4 / NA	266	G150G (GGT→GGC)	yraK	putative fimbrial protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (146/120); total (146/120)

Only 100 of 271 total aligned reads displayed.

CGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT  >  NC_000913/3289341‑3289520

 gACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGAt                                                                                        <  1:4238358/93‑1 (MQ=255)

   ccAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATAc                                                                                      >  1:1180655/1‑93 (MQ=255)

   ccAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATAc                                                                                      >  2:1661899/1‑93 (MQ=255)

    cAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACg                                                                                     >  1:2167757/1‑93 (MQ=255)

     aGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGt                                                                                    <  1:3143079/93‑1 (MQ=255)

     aGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGt                                                                                    <  1:4484676/93‑1 (MQ=255)

     aGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGt                                                                                    >  1:2614203/1‑93 (MQ=255)

      ggTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtc                                                                                   <  2:5820611/93‑1 (MQ=255)

      ggTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtc                                                                                   >  1:5553664/1‑93 (MQ=255)

       gTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtct                                                                                  >  1:3367247/1‑93 (MQ=255)

       gTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtct                                                                                  >  1:3845702/1‑93 (MQ=255)

       gTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtct                                                                                  >  1:5628393/1‑93 (MQ=255)

       gTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtct                                                                                  <  2:2142836/93‑1 (MQ=255)

        ttGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtctc                                                                                 >  2:1283075/1‑93 (MQ=255)

          gTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGt                                                                               >  2:3068877/1‑93 (MQ=255)

               tGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATgg                                                                          <  1:293945/93‑1 (MQ=255)

                gTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGa                                                                         <  2:4513371/93‑1 (MQ=255)

                gTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGa                                                                         <  2:5162317/93‑1 (MQ=255)

                 ttAACACCCGATTCACACAGATAAAAAACCACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAc                                                                        >  2:1154104/1‑93 (MQ=255)

                 ttAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAc                                                                        <  2:1611653/93‑1 (MQ=255)

                  tAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAcc                                                                       >  1:5286417/1‑93 (MQ=255)

                  tAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAcc                                                                       <  2:3631817/93‑1 (MQ=255)

                   aaCACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAccc                                                                      >  2:2008162/1‑93 (MQ=255)

                   aaCACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAccc                                                                      <  1:2813761/93‑1 (MQ=255)

                     cacCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGt                                                                    <  2:2248892/93‑1 (MQ=255)

                       cccGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTa                                                                  >  1:1328560/1‑93 (MQ=255)

                           aTTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAatat                                                              <  1:621188/93‑1 (MQ=255)

                           aTTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGCGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAatat                                                              >  1:472206/1‑93 (MQ=255)

                            ttCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAtt                                                             <  2:2466455/93‑1 (MQ=255)

                             tCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTg                                                            <  1:5818149/93‑1 (MQ=255)

                             tCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTg                                                            >  2:2536301/1‑93 (MQ=255)

                              cacacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTgg                                                           >  2:3374176/1‑93 (MQ=255)

                              cacacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTgg                                                           <  1:2155435/93‑1 (MQ=255)

                               acacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTggg                                                          >  2:4084330/1‑92 (MQ=255)

                               acacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGt                                                          <  2:4797507/93‑1 (MQ=255)

                                cacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGa                                                                                         >  2:5469679/1‑61 (MQ=255)

                                cacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTg                                                         <  1:4313902/93‑1 (MQ=255)

                                 acaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGc                                                        >  2:4672617/1‑93 (MQ=255)

                                  caGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCg                                                       <  1:5931183/93‑1 (MQ=255)

                                    gATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGaa                                                     <  1:1928895/93‑1 (MQ=255)

                                     aTAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAac                                                    >  1:360060/1‑93 (MQ=255)

                                      tAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAaca                                                   >  2:120502/1‑93 (MQ=255)

                                          aaaCAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAAcaccac                                               >  2:4001557/1‑93 (MQ=255)

                                          aaaCAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAAcaccac                                               >  2:5325248/1‑93 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGCACaccacc                                              <  2:6129420/93‑1 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACaccacc                                              <  2:6007402/93‑1 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACaccacc                                              <  1:1820004/93‑1 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACaccacc                                              <  2:2731700/93‑1 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACaccacc                                              <  1:4394616/93‑1 (MQ=255)

                                            acaacaCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCt                                             >  1:1975946/1‑93 (MQ=255)

                                               acacGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTa                                          <  1:1517900/93‑1 (MQ=255)

                                                  cGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAccc                                       >  1:921975/1‑93 (MQ=255)

                                                   ggTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCt                                      >  2:4994600/1‑93 (MQ=255)

                                                   ggTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCt                                      <  2:80689/93‑1 (MQ=255)

                                                     tataTTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTTCCCTGt                                    >  2:2762487/1‑93 (MQ=255)

                                                     tataTTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGt                                    >  2:3000151/1‑93 (MQ=255)

                                                      atatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTa                                   <  1:5149643/93‑1 (MQ=255)

                                                       tatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAt                                  >  2:5421911/1‑93 (MQ=255)

                                                       tatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAt                                  <  2:361412/93‑1 (MQ=255)

                                                       tatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAt                                  >  2:3816538/1‑93 (MQ=255)

                                                       tatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAt                                  >  1:485504/1‑93 (MQ=255)

                                                        atTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATg                                 >  2:3344678/1‑93 (MQ=255)

                                                        atTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATg                                 >  1:4647490/1‑93 (MQ=255)

                                                         ttCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGt                                >  1:2328189/1‑93 (MQ=255)

                                                         ttCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGt                                >  2:1905032/1‑93 (MQ=255)

                                                         ttCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGt                                <  2:1969661/93‑1 (MQ=255)

                                                          tCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTc                               <  2:6196789/93‑1 (MQ=255)

                                                           ctgctgCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCa                              >  1:4092882/1‑93 (MQ=255)

                                                             gctgcAACCCAACCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCAcc                            >  1:3406619/1‑93 (MQ=255)

                                                             gctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCAcc                            <  2:424329/93‑1 (MQ=255)

                                                             gctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCAcc                            >  2:5108753/1‑93 (MQ=255)

                                                               tgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCaa                          <  1:5043888/93‑1 (MQ=255)

                                                               tgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCaa                          >  2:1978689/1‑93 (MQ=255)

                                                                  aaCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGcc                       >  2:2962569/1‑93 (MQ=255)

                                                                  aaCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGcc                       >  1:2900495/1‑93 (MQ=255)

                                                                  aaCCCAAACGGGTGTTGGCGAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGcc                       <  1:3868551/93‑1 (MQ=255)

                                                                   aCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACCCCACCTTTGCCTTGTATGTCACCAAGCCa                      <  2:5686874/93‑1 (MQ=255)

                                                                    cccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAt                     <  1:3255038/93‑1 (MQ=255)

                                                                    cccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAt                     >  1:6261589/1‑93 (MQ=255)

                                                                     ccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAtt                    <  1:2485658/93‑1 (MQ=255)

                                                                      cAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAttt                   >  2:3490242/1‑93 (MQ=255)

                                                                      cAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAttt                   >  1:1618550/1‑93 (MQ=255)

                                                                       aaaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtc                  >  2:5749988/1‑93 (MQ=255)

                                                                       aaaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtc                  >  1:6096005/1‑93 (MQ=255)

                                                                        aaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtct                 <  1:1149326/93‑1 (MQ=255)

                                                                           gggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCgg              >  1:5369155/1‑93 (MQ=255)

                                                                           gggTGTTTGCCAGGGCGATACGTCTCGATATGGACCCGCTAATATTGGGGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCgc              >  1:3718257/1‑92 (MQ=255)

                                                                            ggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGc             >  2:3517658/1‑93 (MQ=255)

                                                                            ggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGc             >  2:4944932/1‑93 (MQ=255)

                                                                            ggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGc             >  1:5415519/1‑93 (MQ=255)

                                                                             gtgtTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCt            >  2:36969/1‑93 (MQ=255)

                                                                                tttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAACCTGTATGTCACCAAGCCCTTTCTCGGCTcca         >  2:1650799/1‑91 (MQ=255)

                                                                                   gCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGa      <  2:4355046/93‑1 (MQ=255)

                                                                                   gCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGa      <  2:3410661/93‑1 (MQ=255)

                                                                                   gCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGa      <  2:3235353/93‑1 (MQ=255)

                                                                                     cAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGAcc    >  1:351962/1‑93 (MQ=255)

                                                                                     cAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGCATGTCACCAAGCCACTTCTCGGCTCGATGAcc    >  2:1824059/1‑93 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  2:560265/93‑1 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  2:876918/93‑1 (MQ=255)

                                                                                       gggCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAt  >  1:239177/1‑93 (MQ=255)

CGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT  >  NC_000913/3289341‑3289520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`