BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,309,164	A→G	R54R (CGT→CGC)	rpsO ←	30S ribosomal subunit protein S15

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,309,164	0	A	G	100.0%	742.7 / NA	230	R54R (CGT→CGC)	rpsO	30S ribosomal subunit protein S15
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/116); total (114/116)

Only 100 of 246 total aligned reads displayed.

CGCTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCACGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGT  >  NC_000913/3309075‑3309253

cgcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcga                                                                                        <  2:906236/93‑1 (MQ=255)

cgcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcga                                                                                        <  2:6094045/93‑1 (MQ=255)

cgcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcga                                                                                        <  2:1550625/93‑1 (MQ=255)

 gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       <  1:1030697/93‑1 (MQ=255)

 gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       <  1:4954243/93‑1 (MQ=255)

 gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       <  2:618666/93‑1 (MQ=255)

 gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       >  2:4308434/1‑93 (MQ=255)

  cTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgacg                                                                                      >  2:88042/1‑93 (MQ=255)

  cTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgacg                                                                                      <  1:5754400/93‑1 (MQ=255)

   tCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACgg                                                                                     <  1:4582470/93‑1 (MQ=255)

   tCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACgg                                                                                     <  2:1465274/93‑1 (MQ=255)

   tCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACgg                                                                                     <  2:5378450/93‑1 (MQ=255)

    cGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGc                                                                                    >  2:1122099/1‑93 (MQ=255)

    cGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGc                                                                                    <  2:4031847/93‑1 (MQ=255)

     gATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCt                                                                                   >  1:1136218/1‑93 (MQ=255)

        gAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtgtg                                                                                <  2:4583895/93‑1 (MQ=255)

         aGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtgg                                                                               <  2:3677993/93‑1 (MQ=255)

          gCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggt                                                                              <  2:4792640/93‑1 (MQ=255)

           cTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggtg                                                                             <  1:3555893/93‑1 (MQ=255)

            tGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGa                                                                            >  1:2944908/1‑93 (MQ=255)

              ggTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATc                                                                          >  2:3041483/1‑93 (MQ=255)

                 gtAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCttt                                                                       <  1:3652061/93‑1 (MQ=255)

                  tAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCtttt                                                                      <  2:689152/93‑1 (MQ=255)

                    aCGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCtttttt                                                                    <  1:2757572/93‑1 (MQ=255)

                    aCGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCtttttt                                                                    <  1:967149/93‑1 (MQ=255)

                    aCGTGCTACGTCTTTACGTTTCAGGGAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCtttttt                                                                    >  1:185252/1‑93 (MQ=255)

                     cGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTtg                                                                   <  2:406747/93‑1 (MQ=255)

                        gCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGc                                                                >  2:4595912/1‑93 (MQ=255)

                        gCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGc                                                                <  1:1104923/93‑1 (MQ=255)

                        gCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGc                                                                <  1:2225170/93‑1 (MQ=255)

                          tACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctc                                                              >  1:1859788/1‑93 (MQ=255)

                          tACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctc                                                              >  2:2688841/1‑93 (MQ=255)

                          tACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctc                                                              <  1:5287476/93‑1 (MQ=255)

                           aCGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctct                                                             >  2:5504182/1‑93 (MQ=255)

                              tCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCa                                                          >  2:3530685/1‑93 (MQ=255)

                              tCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCa                                                          >  2:3180222/1‑93 (MQ=255)

                               cTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCaa                                                         >  2:534590/1‑93 (MQ=255)

                               cTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCaa                                                         >  1:5882859/1‑93 (MQ=255)

                                 ttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAg                                                       >  1:1921270/1‑93 (MQ=255)

                                   aCGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTg                                                     <  1:1298494/93‑1 (MQ=255)

                                    cGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTgg                                                    <  1:3458822/93‑1 (MQ=255)

                                     gTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGc                                                   <  2:4732688/93‑1 (MQ=255)

                                      tttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGcc                                                  >  1:2875424/1‑93 (MQ=255)

                                      tttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGcc                                                  >  2:4915421/1‑93 (MQ=255)

                                       ttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGccc                                                 <  1:4872009/93‑1 (MQ=255)

                                       ttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGccc                                                 <  2:4674377/93‑1 (MQ=255)

                                       ttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGccc                                                 <  1:6241425/93‑1 (MQ=255)

                                        tCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCt                                                >  1:654870/1‑93 (MQ=255)

                                           ggTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCa                                             <  1:1569651/93‑1 (MQ=255)

                                           ggTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCa                                             <  1:2436086/93‑1 (MQ=255)

                                           ggTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCa                                             >  1:563567/1‑93 (MQ=255)

                                             tAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAgg                                           >  1:792227/1‑93 (MQ=255)

                                             tAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAgg                                           >  1:4246478/1‑93 (MQ=255)

                                             tAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAgg                                           <  2:1268446/93‑1 (MQ=255)

                                              aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          <  2:2157374/93‑1 (MQ=255)

                                              aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          <  2:2331056/93‑1 (MQ=255)

                                              aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          >  2:5416582/1‑93 (MQ=255)

                                                 cGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggtggt                                       >  1:2091510/1‑93 (MQ=255)

                                                  gAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGtt                                      <  1:3711178/93‑1 (MQ=255)

                                                    gCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGa                                    >  1:3847258/1‑93 (MQ=255)

                                                      aGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATc                                  >  2:4121648/1‑93 (MQ=255)

                                                      aGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATc                                  <  2:2749379/93‑1 (MQ=255)

                                                      aGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATc                                  <  2:2893601/93‑1 (MQ=255)

                                                       gTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCt                                 >  2:1938429/1‑93 (MQ=255)

                                                       gTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCt                                 >  2:4093207/1‑93 (MQ=255)

                                                       gTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCt                                 >  1:2961978/1‑93 (MQ=255)

                                                        tttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtg                                >  1:3130851/1‑93 (MQ=255)

                                                        tttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGGGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGGGGTTGATCtg                                >  1:3610221/1‑93 (MQ=255)

                                                         ttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtgt                               >  1:4056497/1‑93 (MQ=255)

                                                         ttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtgt                               >  1:5033845/1‑93 (MQ=255)

                                                           acgacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGc                             <  1:5975987/93‑1 (MQ=255)

                                                            cgacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCa                            <  2:6304535/93‑1 (MQ=255)

                                                            cgacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCa                            <  1:4165544/93‑1 (MQ=255)

                                                            cgacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCa                            <  1:2614187/93‑1 (MQ=255)

                                                              acgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGt                          <  1:3906832/93‑1 (MQ=255)

                                                                 cTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcag                       >  2:2468940/1‑93 (MQ=255)

                                                                  tGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagc                      >  1:2383618/1‑93 (MQ=255)

                                                                    agaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagcag                    <  1:4619551/93‑1 (MQ=255)

                                                                     gaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGt                   >  2:1187639/1‑93 (MQ=255)

                                                                      aaaCCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTg                  >  1:735625/1‑93 (MQ=255)

                                                                       aaCCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGc                 >  1:852815/1‑93 (MQ=255)

                                                                       aaCCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGc                 <  2:4461153/93‑1 (MQ=255)

                                                                         ccATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTa               >  1:3829434/1‑93 (MQ=255)

                                                                         ccATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTa               <  2:482819/93‑1 (MQ=255)

                                                                          cATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTAc              >  1:1884953/1‑93 (MQ=255)

                                                                          cATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTAc              <  1:5488355/93‑1 (MQ=255)

                                                                            tGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCt            >  1:4288317/1‑93 (MQ=255)

                                                                            tGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCt            >  1:1603813/1‑93 (MQ=255)

                                                                            tGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCt            <  2:5888037/93‑1 (MQ=255)

                                                                              cgcAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGa          >  1:3978976/1‑93 (MQ=255)

                                                                               gcagcaGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGaa         >  2:2840541/1‑93 (MQ=255)

                                                                                cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        <  2:3096243/93‑1 (MQ=255)

                                                                                cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        >  2:5169627/1‑93 (MQ=255)

                                                                                cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        <  2:2290936/93‑1 (MQ=255)

                                                                                 agcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGGCCTGCAGGCGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACt       >  1:4385540/1‑93 (MQ=255)

                                                                                 agcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACt       >  1:4738232/1‑93 (MQ=255)

                                                                                   cagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTc     <  2:5730939/93‑1 (MQ=255)

                                                                                   cagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTc     <  1:3357469/93‑1 (MQ=255)

                                                                                     gACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCgg   <  2:6042641/93‑1 (MQ=255)

                                                                                      aCCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGt  >  1:1348362/1‑93 (MQ=255)

CGCTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCACGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGT  >  NC_000913/3309075‑3309253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`