BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,316,316	T→C	R13R (CGT→CGC)	argG →	argininosuccinate synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,316,316	0	T	C	100.0%	905.4 / NA	276	R13R (CGT→CGC)	argG	argininosuccinate synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (143/133); total (143/133)

Only 100 of 276 total aligned reads displayed.

TGAGAGCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGC  >  NC_000913/3316226‑3316405

   gagCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTgg                                                                                      <  2:4169335/93‑1 (MQ=255)

     gCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTa                                                                                    <  1:84097/93‑1 (MQ=255)

      cGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTAt                                                                                   <  1:3304631/93‑1 (MQ=255)

       ggAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATc                                                                                  >  1:2272208/1‑93 (MQ=255)

        gAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCg                                                                                 >  1:2715790/1‑93 (MQ=255)

        gAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCg                                                                                 >  1:5780145/1‑93 (MQ=255)

          aaTCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCt                                                                               >  2:4470522/1‑93 (MQ=255)

           aTCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCtt                                                                              >  2:3331759/1‑93 (MQ=255)

            tCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCttt                                                                             >  1:2772103/1‑93 (MQ=255)

            tCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCttt                                                                             <  2:5543564/93‑1 (MQ=255)

            tCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCttt                                                                             <  2:4268122/93‑1 (MQ=255)

             ccAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCtttt                                                                            <  1:1004295/93‑1 (MQ=255)

              cAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCttttt                                                                           >  2:479011/1‑93 (MQ=255)

              cAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCttttt                                                                           >  2:1417700/1‑93 (MQ=255)

              cAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCttttt                                                                           <  2:2747030/93‑1 (MQ=255)

                ggCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCt                                                                         >  2:39438/1‑93 (MQ=255)

                ggCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCt                                                                         <  1:4861854/93‑1 (MQ=255)

                ggCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCt                                                                         <  2:1659065/93‑1 (MQ=255)

                 gCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTg                                                                        <  2:22604/93‑1 (MQ=255)

                 gCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTg                                                                        <  2:4393788/93‑1 (MQ=255)

                 gCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTg                                                                        <  1:1384586/93‑1 (MQ=255)

                  cTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTgg                                                                       >  1:2249411/1‑93 (MQ=255)

                   tcatcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGc                                                                      >  2:5619132/1‑93 (MQ=255)

                    catcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCg                                                                     <  1:5471991/93‑1 (MQ=255)

                    catcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCg                                                                     >  1:1620674/1‑93 (MQ=255)

                     atcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCgg                                                                    >  1:3139186/1‑93 (MQ=255)

                      tcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGt                                                                   >  2:3200725/1‑93 (MQ=255)

                       catcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTc                                                                  >  2:3427888/1‑93 (MQ=255)

                       catcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTc                                                                  <  2:6246682/93‑1 (MQ=255)

                        atcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGTATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCt                                                                 >  2:5099011/1‑93 (MQ=255)

                        atcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCt                                                                 <  1:5989202/93‑1 (MQ=255)

                         tcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTg                                                                >  1:6024229/1‑93 (MQ=255)

                         tcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTg                                                                >  2:2862462/1‑93 (MQ=255)

                           aGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGa                                                              >  1:1121258/1‑93 (MQ=255)

                             ttaattaaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGaca                                                            <  2:5027243/93‑1 (MQ=255)

                              taattaaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGacac                                                           <  1:4427870/93‑1 (MQ=255)

                                 ttaaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAg                                                        <  1:4292766/93‑1 (MQ=255)

                                 ttaaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAg                                                        <  2:488164/93‑1 (MQ=255)

                                 ttaaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAg                                                        >  2:608432/1‑93 (MQ=255)

                                  taaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGt                                                       <  1:5281496/93‑1 (MQ=255)

                                         ggTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCAc                                                >  1:4753397/1‑93 (MQ=255)

                                         ggTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCAc                                                >  1:4000659/1‑93 (MQ=255)

                                         ggTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCAc                                                <  1:3595297/93‑1 (MQ=255)

                                           tgtTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActg                                              >  1:4462514/1‑93 (MQ=255)

                                           tgtTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActg                                              >  1:1343920/1‑93 (MQ=255)

                                             ttATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActgct                                            <  2:6018287/93‑1 (MQ=255)

                                              tATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActgctg                                           <  2:305756/93‑1 (MQ=255)

                                               aTTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCtgt                                          <  2:1175974/93‑1 (MQ=255)

                                               aTTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCtgt                                          <  1:1449667/93‑1 (MQ=255)

                                                ttttATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCtgtg                                         <  2:840791/93‑1 (MQ=255)

                                                 tttATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTgg                                        <  2:1826322/93‑1 (MQ=255)

                                                  ttATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGa                                       <  1:1290134/93‑1 (MQ=255)

                                                  ttATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGa                                       <  2:1112319/93‑1 (MQ=255)

                                                  ttATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGa                                       <  1:1745539/93‑1 (MQ=255)

                                                   tATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGAt                                      <  2:593104/93‑1 (MQ=255)

                                                   tATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGAt                                      >  2:3681573/1‑93 (MQ=255)

                                                    aTGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATg                                     >  2:2411406/1‑93 (MQ=255)

                                                       acgacgATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGa                                  >  2:2188489/1‑93 (MQ=255)

                                                       acgacgATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGa                                  <  2:4593581/93‑1 (MQ=255)

                                                        cgacgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGAc                                 >  2:1572799/1‑93 (MQ=255)

                                                        cgacgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGAc                                 >  1:4679626/1‑93 (MQ=255)

                                                         gacgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACa                                <  1:5713333/93‑1 (MQ=255)

                                                          acgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaa                               >  1:2547592/1‑93 (MQ=255)

                                                          acgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaa                               >  1:934830/1‑93 (MQ=255)

                                                          acgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaa                               >  1:2125347/1‑93 (MQ=255)

                                                          acgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaa                               >  1:6213502/1‑93 (MQ=255)

                                                          acgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaa                               >  1:6240534/1‑93 (MQ=255)

                                                           cgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaaa                              >  2:5158120/1‑93 (MQ=255)

                                                            gaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaaaa                             <  1:5935971/93‑1 (MQ=255)

                                                             aTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGCCACCAGTGCCGCACTGCTGTGGATGCGACAAAAg                            >  2:2108290/1‑93 (MQ=255)

                                                             aTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAg                            >  1:2345008/1‑93 (MQ=255)

                                                             aTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAg                            <  1:5597727/93‑1 (MQ=255)

                                                             aTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTAACGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAg                            >  1:4243885/1‑93 (MQ=255)

                                                                ctcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGa                         <  1:5173046/93‑1 (MQ=255)

                                                                ctcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGa                         <  2:5341376/93‑1 (MQ=255)

                                                                 tcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAg                        >  2:5769001/1‑93 (MQ=255)

                                                                 tcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAg                        <  1:2516554/93‑1 (MQ=255)

                                                                     gCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGt                    <  1:4556825/93‑1 (MQ=255)

                                                                     gCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGt                    >  2:2535059/1‑93 (MQ=255)

                                                                       aTCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTc                  >  2:1705966/1‑93 (MQ=255)

                                                                        tctcCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGCCACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGCGCGGTTcc                 >  1:3034137/1‑93 (MQ=255)

                                                                          tcCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCtt               >  1:1762866/1‑93 (MQ=255)

                                                                           cccGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTa              >  1:2741836/1‑93 (MQ=255)

                                                                            ccGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTAt             >  1:3263733/1‑93 (MQ=255)

                                                                             cGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATg            >  1:5340734/1‑93 (MQ=255)

                                                                               gTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCa          >  1:2918993/1‑93 (MQ=255)

                                                                               gTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCa          >  1:4993634/1‑93 (MQ=255)

                                                                                tAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCat         <  1:1240318/93‑1 (MQ=255)

                                                                                tAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCat         <  1:2531573/93‑1 (MQ=255)

                                                                                 aGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCata        <  1:634551/93‑1 (MQ=255)

                                                                                 aGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGGTCCTTATGCata        >  1:989847/1‑93 (MQ=255)

                                                                                  ggTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCatat       <  2:191225/93‑1 (MQ=255)

                                                                                   gTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCAtata      >  1:1864289/1‑93 (MQ=255)

                                                                                   gTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCAtata      <  1:4170944/93‑1 (MQ=255)

                                                                                   gTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGATCCTTATGCAtata      >  1:2610407/1‑93 (MQ=255)

                                                                                   gTCAACGCATTCGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCAtata      <  1:3400803/93‑1 (MQ=255)

                                                                                    tCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATAc     <  2:3465846/93‑1 (MQ=255)

                                                                                    tCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATAc     <  2:1345278/93‑1 (MQ=255)

                                                                                    tCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATAc     <  2:661861/93‑1 (MQ=255)

                                                                                     cAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACt    <  2:6188775/93‑1 (MQ=255)

TGAGAGCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGC  >  NC_000913/3316226‑3316405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`