BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,351,337	T→C	T117A (ACC→GCC)	yhcC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,351,337	0	T	C	100.0%	777.1 / NA	244	T117A (ACC→GCC)	yhcC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/118); total (126/118)

Only 100 of 251 total aligned reads displayed.

GTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT  >  NC_000913/3351247‑3351426

ttAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAc                                                                                         <  1:5128597/92‑1 (MQ=255)

gTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAc                                                                                         <  1:4889688/93‑1 (MQ=255)

gTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAc                                                                                         <  2:2851120/93‑1 (MQ=255)

  aGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAccc                                                                                       <  2:5995198/93‑1 (MQ=255)

  aGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAccc                                                                                       >  1:1814496/1‑93 (MQ=255)

    ccccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcac                                                                                     >  2:1443363/1‑93 (MQ=255)

      ccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacac                                                                                   >  1:2480869/1‑93 (MQ=255)

      ccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacac                                                                                   <  1:5542344/93‑1 (MQ=255)

           tCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACaaa                                                                              >  1:3758723/1‑93 (MQ=255)

            ccAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAc                                                                             >  2:17741/1‑93 (MQ=255)

             cAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAcc                                                                            >  2:3229680/1‑93 (MQ=255)

             cAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAcc                                                                            <  1:5452764/93‑1 (MQ=255)

               gCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGa                                                                          <  2:6086494/93‑1 (MQ=255)

                  acacTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACaa                                                                       >  1:5257293/1‑93 (MQ=255)

                  acacTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACaa                                                                       <  1:4323023/93‑1 (MQ=255)

                  acacTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACaa                                                                       >  1:3489101/1‑93 (MQ=255)

                    acTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAata                                                                     >  2:66376/1‑93 (MQ=255)

                    acTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAata                                                                     >  2:2087270/1‑93 (MQ=255)

                     cTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAatat                                                                    <  1:803502/93‑1 (MQ=255)

                     cTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAatat                                                                    <  1:2375151/93‑1 (MQ=255)

                      ttCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAtt                                                                   <  2:4996182/93‑1 (MQ=255)

                      ttCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAtt                                                                   <  2:1573709/93‑1 (MQ=255)

                       tCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTg                                                                  >  2:3953600/1‑93 (MQ=255)

                       tCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTg                                                                  <  1:5963873/93‑1 (MQ=255)

                       tCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTg                                                                  <  1:5332552/93‑1 (MQ=255)

                       tCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTg                                                                  <  2:4253351/93‑1 (MQ=255)

                        cGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTgg                                                                 <  1:2684633/93‑1 (MQ=255)

                         ctAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGc                                                                <  1:4259297/92‑1 (MQ=255)

                          gaaCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCAGCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGcc                                                               <  2:872518/92‑1 (MQ=255)

                           aaCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCt                                                              <  2:1308707/93‑1 (MQ=255)

                             cccTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTgg                                                            <  2:1651538/93‑1 (MQ=255)

                              ccTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGc                                                           >  1:4613228/1‑93 (MQ=255)

                               cTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCt                                                          >  1:1068448/1‑93 (MQ=255)

                                tGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTc                                                         <  2:4459565/93‑1 (MQ=255)

                                tGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTc                                                         >  2:4713494/1‑93 (MQ=255)

                                  gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCAc                                                       >  2:1827346/1‑93 (MQ=255)

                                  gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCAc                                                       >  1:6293312/1‑93 (MQ=255)

                                   tCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCAcc                                                      <  1:5638140/93‑1 (MQ=255)

                                    ccTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCg                                                     >  1:1116440/1‑93 (MQ=255)

                                    ccTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCg                                                     >  2:390830/1‑93 (MQ=255)

                                    ccTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCg                                                     <  2:4437839/93‑1 (MQ=255)

                                      ttATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGcc                                                   >  2:3818578/1‑93 (MQ=255)

                                       tataTTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCct                                                  >  1:204992/1‑93 (MQ=255)

                                           ttCGCAAAGCAGATCCAGCACCGCATACGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgctg                                              >  2:4872735/1‑93 (MQ=255)

                                             cGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGAt                                            >  2:4923692/1‑93 (MQ=255)

                                             cGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGAt                                            <  1:783709/93‑1 (MQ=255)

                                              gCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATa                                           >  2:2576358/1‑93 (MQ=255)

                                              gCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATa                                           <  1:2739240/93‑1 (MQ=255)

                                              gCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATa                                           <  1:5752269/93‑1 (MQ=255)

                                              gCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATa                                           >  1:1273971/1‑93 (MQ=255)

                                                aaaGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACa                                         <  1:2251188/93‑1 (MQ=255)

                                                aaaGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACa                                         >  2:6267166/1‑93 (MQ=255)

                                                  aGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATa                                       <  2:4082987/93‑1 (MQ=255)

                                                   gCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAg                                      <  1:2324587/93‑1 (MQ=255)

                                                     aGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGaa                                    >  1:132175/1‑93 (MQ=255)

                                                       aTCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACg                                  >  1:6025577/1‑93 (MQ=255)

                                                        tCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgc                                 >  2:365660/1‑93 (MQ=255)

                                                         ccAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgca                                <  1:4569164/93‑1 (MQ=255)

                                                          cAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcag                               <  1:3954022/93‑1 (MQ=255)

                                                          cAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcag                               >  2:193225/1‑93 (MQ=255)

                                                            gCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagca                             >  1:6005754/1‑93 (MQ=255)

                                                            gCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagca                             >  2:5479359/1‑93 (MQ=255)

                                                            gCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagca                             >  2:1049767/1‑93 (MQ=255)

                                                            gCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCCGGCTCACCGCCTGCTGATACATAGAACgcagca                             >  1:2522123/1‑93 (MQ=255)

                                                             cACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAc                            >  2:2684450/1‑93 (MQ=255)

                                                              cccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAcc                           <  1:3994948/92‑1 (MQ=255)

                                                              cccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAcc                           <  1:3193629/92‑1 (MQ=255)

                                                              aCCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAcc                           <  1:1136771/93‑1 (MQ=255)

                                                              aCCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAcc                           >  1:4069448/1‑93 (MQ=255)

                                                              aCCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAcc                           >  2:5735281/1‑93 (MQ=255)

                                                               ccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCt                          <  2:2896731/93‑1 (MQ=255)

                                                               ccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCt                          <  2:3556730/93‑1 (MQ=255)

                                                               ccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCt                          <  2:2387894/93‑1 (MQ=255)

                                                               ccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCt                          >  2:2168136/1‑93 (MQ=255)

                                                                cGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTg                         >  1:1013846/1‑93 (MQ=255)

                                                                  cATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGaa                       >  2:3773751/1‑93 (MQ=255)

                                                                  cATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGaa                       >  2:1218335/1‑93 (MQ=255)

                                                                   aTCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAc                      <  2:5386279/93‑1 (MQ=255)

                                                                   aTCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAc                      <  1:661171/93‑1 (MQ=255)

                                                                   aTCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAc                      <  1:3033743/93‑1 (MQ=255)

                                                                    tCCGGCACGCAGTCGGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     <  2:1118433/93‑1 (MQ=255)

                                                                    cccGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     <  2:4316172/92‑1 (MQ=255)

                                                                      cGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTc                   <  1:4939305/93‑1 (MQ=255)

                                                                      cGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTc                   >  1:2195740/1‑93 (MQ=255)

                                                                       ggCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTcc                  <  2:2457634/93‑1 (MQ=255)

                                                                       ggCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTcc                  <  2:4830795/93‑1 (MQ=255)

                                                                           cGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa              <  1:1983973/93‑1 (MQ=255)

                                                                            gCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaaa             >  2:5877889/1‑93 (MQ=255)

                                                                            gCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaaa             <  1:4367390/93‑1 (MQ=255)

                                                                             cAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAg            <  2:3200663/93‑1 (MQ=255)

                                                                               gTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGt          <  2:4632203/93‑1 (MQ=255)

                                                                               gTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGt          >  1:5167108/1‑93 (MQ=255)

                                                                                gccGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTg         <  2:4542407/92‑1 (MQ=255)

                                                                                  cgggcgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCt       >  2:2226248/1‑93 (MQ=255)

                                                                                   gggcgggcACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTg      >  1:1538016/1‑93 (MQ=255)

                                                                                     gcgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGt    >  1:1662575/1‑93 (MQ=255)

                                                                                      cgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGta   <  1:5935385/93‑1 (MQ=255)

                                                                                      cgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGta   <  2:361778/93‑1 (MQ=255)

                                                                                       gggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGtat  >  2:5519201/1‑93 (MQ=255)

                                                                                       gggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGtat  >  1:1946925/1‑93 (MQ=255)

GTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT  >  NC_000913/3351247‑3351426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`