BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,352,410	C→T	I48I (ATC→ATT)	gltB →	glutamate synthase large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,352,410	0	C	T	100.0%	919.5 / NA	245	I48I (ATC→ATT)	gltB	glutamate synthase large subunit
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (135/110); total (135/110)

Only 100 of 247 total aligned reads displayed.

GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC  >  NC_000913/3352320‑3352499

ggAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGc                                                                                         >  1:1031122/1‑93 (MQ=255)

ggAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGc                                                                                         >  2:2465005/1‑93 (MQ=255)

  aaGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGccc                                                                                       <  1:5244489/93‑1 (MQ=255)

  aaGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGccc                                                                                       <  1:4787157/93‑1 (MQ=255)

     tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                    >  1:1663486/1‑93 (MQ=255)

      ggggTTCCCGCGGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAt                                                                                   >  2:680038/1‑93 (MQ=255)

        ggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAg                                                                                 <  1:121790/93‑1 (MQ=255)

        ggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAg                                                                                 >  2:322170/1‑93 (MQ=255)

         gTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGa                                                                                >  2:2640583/1‑93 (MQ=255)

          ttCCCGCAGAGCCTGGGTGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa                                                                               <  1:2295872/93‑1 (MQ=255)

           tcacGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAg                                                                              <  1:5310326/90‑1 (MQ=255)

            cccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAgg                                                                             <  1:3754740/93‑1 (MQ=255)

             ccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGc                                                                            >  1:3856049/1‑93 (MQ=255)

                cAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGaa                                                                         >  2:5795316/1‑93 (MQ=255)

                cAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGaa                                                                         <  2:143452/93‑1 (MQ=255)

                 agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        >  1:1608618/1‑93 (MQ=255)

                   agCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCt                                                                      <  1:4223152/93‑1 (MQ=255)

                     ccTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAg                                                                    >  1:5480017/1‑93 (MQ=255)

                      cTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGc                                                                   >  2:634420/1‑93 (MQ=255)

                       tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                  >  1:1150234/1‑93 (MQ=255)

                        gggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCca                                                                 >  1:3658114/1‑93 (MQ=255)

                        gggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCca                                                                 >  1:2528888/1‑93 (MQ=255)

                         ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac                                                                <  2:1012581/93‑1 (MQ=255)

                         ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac                                                                <  1:2392792/93‑1 (MQ=255)

                          gggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcaca                                                               >  1:1986250/1‑93 (MQ=255)

                           ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa                                                              <  2:923/93‑1 (MQ=255)

                           ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa                                                              >  1:2095833/1‑93 (MQ=255)

                            gAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAg                                                             >  1:4644371/1‑93 (MQ=255)

                            gAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAg                                                             <  2:1375405/93‑1 (MQ=255)

                             aGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAgg                                                            <  2:88714/93‑1 (MQ=255)

                              ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGt                                                           <  1:4270634/93‑1 (MQ=255)

                               gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa                                                          <  2:5502969/93‑1 (MQ=255)

                               gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa                                                          <  1:985503/93‑1 (MQ=255)

                               gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa                                                          <  1:1803149/93‑1 (MQ=255)

                                 tCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGt                                                        <  2:5255691/93‑1 (MQ=255)

                                  cACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg                                                       >  2:4468337/1‑93 (MQ=255)

                                     gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt                                                    >  1:5697818/1‑93 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  >  2:5397566/1‑93 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  >  2:4316656/1‑93 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  >  2:3163125/1‑93 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAACGCAGTGCGTAc                                                  >  2:6205265/1‑93 (MQ=255)

                                        atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt                                                 >  1:3699548/1‑93 (MQ=255)

                                        atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt                                                 >  2:4046695/1‑93 (MQ=255)

                                            tgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCaa                                             <  1:3394094/93‑1 (MQ=255)

                                             gtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAt                                            >  2:5062575/1‑93 (MQ=255)

                                               aCGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATac                                          >  1:2224061/1‑93 (MQ=255)

                                                cGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATaca                                         <  2:1799048/93‑1 (MQ=255)

                                                cGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATaca                                         >  2:128797/1‑93 (MQ=255)

                                                 gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac                                        >  1:5004268/1‑93 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       >  2:3113137/1‑93 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       <  2:4069116/93‑1 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       >  2:794348/1‑93 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       >  2:361940/1‑93 (MQ=255)

                                                     aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCTTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                    <  1:585379/93‑1 (MQ=255)

                                                     aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                    <  1:767919/93‑1 (MQ=255)

                                                      aTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACt                                   >  1:3082033/1‑93 (MQ=255)

                                                      aTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACt                                   >  2:2408733/1‑93 (MQ=255)

                                                      aTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACt                                   <  2:2153382/93‑1 (MQ=255)

                                                       tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg                                  <  2:2708706/93‑1 (MQ=255)

                                                       tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg                                  >  2:5596322/1‑93 (MQ=255)

                                                         ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc                                <  2:3849294/93‑1 (MQ=255)

                                                         ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc                                <  1:3580931/93‑1 (MQ=255)

                                                         ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc                                <  2:3362915/93‑1 (MQ=255)

                                                          cTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGcc                               <  1:4840590/93‑1 (MQ=255)

                                                             gagaGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGc                            <  2:2218878/93‑1 (MQ=255)

                                                              agagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCa                           <  1:3035367/93‑1 (MQ=255)

                                                              agagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAAGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCa                           >  2:5909288/1‑93 (MQ=255)

                                                               gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt                          >  2:4979802/1‑93 (MQ=255)

                                                               gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt                          >  1:4650524/1‑93 (MQ=255)

                                                                agGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTACTGCGTACTGCAATACAAGCAGTTGCCCGCAtc                         >  1:1385201/1‑92 (MQ=255)

                                                                 gggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgc                        >  2:293364/1‑93 (MQ=255)

                                                                  ggATAACTGTGGTTTTGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca                       >  2:3894788/1‑93 (MQ=255)

                                                                    aTAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagc                     >  1:3278676/1‑93 (MQ=255)

                                                                     tAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagca                    >  1:49556/1‑93 (MQ=255)

                                                                       aCTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAcc                  >  1:6160406/1‑93 (MQ=255)

                                                                        cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 >  1:5382477/1‑93 (MQ=255)

                                                                        cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 >  1:676522/1‑93 (MQ=255)

                                                                        cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 >  2:1922782/1‑93 (MQ=255)

                                                                         tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                <  2:741694/93‑1 (MQ=255)

                                                                         tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                <  1:4445298/93‑1 (MQ=255)

                                                                          gtgGTTTCGGCCTGATTGCCCACATAGCAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTg               >  2:2780426/1‑93 (MQ=255)

                                                                          gtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCCTg               >  2:3530961/1‑93 (MQ=255)

                                                                           tgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTgg              >  2:1205617/1‑93 (MQ=255)

                                                                              tttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGgcgc           <  1:4057267/93‑1 (MQ=255)

                                                                              tttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCACGCAGCACCGTGgcgc           >  1:5141047/1‑93 (MQ=255)

                                                                                tCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGa         >  2:4796622/1‑93 (MQ=255)

                                                                                 cGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAt        <  1:145025/93‑1 (MQ=255)

                                                                                  ggCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAtt       <  2:6059438/93‑1 (MQ=255)

                                                                                   gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACCAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc      >  2:3253891/1‑93 (MQ=255)

                                                                                   gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc      >  1:6083027/1‑93 (MQ=255)

                                                                                   gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc      >  1:5968947/1‑93 (MQ=255)

                                                                                    ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct     >  2:6226913/1‑93 (MQ=255)

                                                                                    ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct     >  1:5407292/1‑93 (MQ=255)

                                                                                     cTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc    >  2:4823850/1‑93 (MQ=255)

                                                                                      tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg   >  2:2731970/1‑93 (MQ=255)

                                                                                      tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg   >  2:5627981/1‑93 (MQ=255)

                                                                                      tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg   >  2:1312704/1‑93 (MQ=255)

                                                                                      tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg   >  2:67510/1‑93 (MQ=255)

                                                                                       gATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGc  >  1:2751122/1‑93 (MQ=255)

                                                                                       gATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGc  >  2:2825767/1‑93 (MQ=255)

GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC  >  NC_000913/3352320‑3352499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`