BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,374,263	T→C	Q50R (CAA→CGA)	sspB ←	stringent starvation protein B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,374,263	0	T	C	100.0%	781.4 / NA	242	Q50R (CAA→CGA)	sspB	stringent starvation protein B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (118/124); total (118/124)

Only 100 of 250 total aligned reads displayed.

GGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC  >  NC_000913/3374173‑3374352

 gAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGcc                                                                                        >  1:5815695/1‑93 (MQ=255)

 gAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGcc                                                                                        >  1:5537518/1‑93 (MQ=255)

 gAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGcc                                                                                        <  1:4815845/93‑1 (MQ=255)

 gAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGcc                                                                                        >  1:1681574/1‑93 (MQ=255)

  aaTGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGccc                                                                                       <  2:2540464/93‑1 (MQ=255)

     gCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCATTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTc                                                                                    <  1:150232/93‑1 (MQ=255)

       caccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAc                                                                                  <  1:685186/93‑1 (MQ=255)

       caccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAc                                                                                  >  2:5450273/1‑93 (MQ=255)

        accaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcg                                                                                 >  2:3986188/1‑93 (MQ=255)

        accaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcg                                                                                 >  2:2153320/1‑93 (MQ=255)

        accaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcg                                                                                 >  1:2272440/1‑93 (MQ=255)

         ccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcgc                                                                                <  2:4082071/93‑1 (MQ=255)

         ccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcgc                                                                                <  1:2579155/93‑1 (MQ=255)

            aaGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCa                                                                             <  2:4856193/93‑1 (MQ=255)

             aGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCat                                                                            >  2:2499195/1‑93 (MQ=255)

              gcgcgcGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCata                                                                           >  1:1604855/1‑93 (MQ=255)

                gcgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGCTTGCCGACAGCACGCGGCGCAATGTTGCGTACGATTCGCCCCTCACGCGCATAtt                                                                         >  2:1052988/1‑93 (MQ=255)

                gcgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAtt                                                                         <  1:2889196/93‑1 (MQ=255)

                 cgcgTTAACGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTc                                                                        >  2:6128316/1‑93 (MQ=255)

                 cgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTc                                                                        <  2:3119367/93‑1 (MQ=255)

                  gcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTcc                                                                       >  1:386688/1‑93 (MQ=255)

                    gTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAt                                                                     <  2:1815544/93‑1 (MQ=255)

                    gTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAt                                                                     >  1:4147478/1‑93 (MQ=255)

                     ttAAAGCTCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    <  1:3173972/93‑1 (MQ=255)

                     ttAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    <  2:5084416/93‑1 (MQ=255)

                     ttAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    >  1:4414531/1‑93 (MQ=255)

                     ttAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    <  1:3374005/93‑1 (MQ=255)

                      tAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACTCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTACATAg                                                                   >  1:3925120/1‑93 (MQ=255)

                      tAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAg                                                                   >  2:2851/1‑93 (MQ=255)

                      tAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCAGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAg                                                                   <  2:3440668/93‑1 (MQ=255)

                       aaaGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAgg                                                                  <  2:4921292/93‑1 (MQ=255)

                          gcgcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAc                                                               >  1:3026644/1‑93 (MQ=255)

                          gcgcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAc                                                               <  2:3564554/93‑1 (MQ=255)

                           cgcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAcc                                                              <  1:1603008/93‑1 (MQ=255)

                           cgcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAcc                                                              <  2:3416793/93‑1 (MQ=255)

                            gcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCt                                                             >  1:1046082/1‑93 (MQ=255)

                            gcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCt                                                             >  1:1839478/1‑93 (MQ=255)

                              aCCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGc                                                           >  1:1652137/1‑93 (MQ=255)

                                cTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAc                                                         >  2:428956/1‑93 (MQ=255)

                                 tcatcaTTCGCCAGTTCCAGGTTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAcc                                                        >  2:6057373/1‑92 (MQ=255)

                                   atcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGcc                                                      >  2:1356956/1‑93 (MQ=255)

                                    tcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCa                                                     >  2:5348880/1‑93 (MQ=255)

                                    tcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCa                                                     <  1:2556925/93‑1 (MQ=255)

                                     catTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAg                                                    >  2:3918868/1‑93 (MQ=255)

                                      atTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAgg                                                   >  2:5291394/1‑93 (MQ=255)

                                        tCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGa                                                 <  1:2108427/93‑1 (MQ=255)

                                        tCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGa                                                 <  1:1884025/93‑1 (MQ=255)

                                          gCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGc                                               >  1:476758/1‑93 (MQ=255)

                                           ccAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCg                                              >  1:3994316/1‑93 (MQ=255)

                                            cAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGt                                             >  2:3462681/1‑93 (MQ=255)

                                             aGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTc                                            <  1:5446589/93‑1 (MQ=255)

                                              gTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTca                                           >  2:1048580/1‑93 (MQ=255)

                                                tCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTcaca                                         <  2:651413/93‑1 (MQ=255)

                                                 ccAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACAt                                        >  1:1764980/1‑93 (MQ=255)

                                                 ccAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACAt                                        <  1:6020234/93‑1 (MQ=255)

                                                   aGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcc                                      <  2:3323516/93‑1 (MQ=255)

                                                   aGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcc                                      <  2:5550249/93‑1 (MQ=255)

                                                   aGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcc                                      <  2:5001159/93‑1 (MQ=255)

                                                     aTTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccac                                    <  1:62840/93‑1 (MQ=255)

                                                        gCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccac                                 <  2:4044436/93‑1 (MQ=255)

                                                        gCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccac                                 <  2:3683403/93‑1 (MQ=255)

                                                        gCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccac                                 <  1:2832002/93‑1 (MQ=255)

                                                          cGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGTGAGCGTCACATccaccacca                               <  2:3586323/93‑1 (MQ=255)

                                                          cGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccacca                               <  1:5298544/93‑1 (MQ=255)

                                                           gACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAg                              <  2:6299423/93‑1 (MQ=255)

                                                           gACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAg                              <  2:4595157/93‑1 (MQ=255)

                                                           gACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAg                              <  2:3787970/93‑1 (MQ=255)

                                                           gACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAg                              <  1:1358070/93‑1 (MQ=255)

                                                           gACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAg                              >  1:3267457/1‑93 (MQ=255)

                                                           gACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCAAATCCCCCACCAg                              >  1:5154586/1‑93 (MQ=255)

                                                            aCAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAgg                             <  1:5835481/93‑1 (MQ=255)

                                                            aCAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGCCACGCGCATCTTCCATAGGAACCTGCACGCCAGCGAGCGTCACATCCACCACCAgg                             >  2:5811177/1‑93 (MQ=255)

                                                             cAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGt                            <  1:5975498/93‑1 (MQ=255)

                                                               gCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgc                          <  1:2511207/93‑1 (MQ=255)

                                                               gCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgc                          <  1:3556692/93‑1 (MQ=255)

                                                                 aCGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCGCATCCGCCACCAGGTgcgg                        >  2:1240931/1‑93 (MQ=255)

                                                                    cggcgCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGt                     <  1:3351698/93‑1 (MQ=255)

                                                                      gcgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGa                   >  1:1051527/1‑93 (MQ=255)

                                                                      gcgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGa                   >  2:1609418/1‑93 (MQ=255)

                                                                      gcgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGa                   >  1:5627281/1‑93 (MQ=255)

                                                                         cAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCt                >  1:2966532/1‑93 (MQ=255)

                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               >  2:1880097/1‑93 (MQ=255)

                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               <  2:1515415/93‑1 (MQ=255)

                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               <  2:5908413/93‑1 (MQ=255)

                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               >  1:5711378/1‑93 (MQ=255)

                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCCGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               >  1:2167350/1‑93 (MQ=255)

                                                                           aTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTgg              <  1:3719516/93‑1 (MQ=255)

                                                                             gTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGtt            >  2:749668/1‑93 (MQ=255)

                                                                              ttGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTa           <  1:1293094/93‑1 (MQ=255)

                                                                               tGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTAt          <  2:203661/93‑1 (MQ=255)

                                                                               tGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTAt          <  2:4648059/93‑1 (MQ=255)

                                                                                gAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATc         <  1:4989438/93‑1 (MQ=255)

                                                                                gAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATc         >  1:2663071/1‑93 (MQ=255)

                                                                                 aGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATcc        <  1:1525747/93‑1 (MQ=255)

                                                                                    aCGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGc     >  1:1935565/1‑93 (MQ=255)

                                                                                     cGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACTTCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCa    <  1:4621019/93‑1 (MQ=255)

                                                                                      gATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCCCCACCAGGTGCGGCGTGAGCTGGTTATCCAGCaa   <  1:2601927/93‑1 (MQ=255)

                                                                                       aTTCGCCCGTCACGCTCTTATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAc  <  2:4380353/93‑1 (MQ=255)

                                                                                       aTTCGCCCGTCACGCTCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCCCCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAc  <  1:5324169/93‑1 (MQ=255)

                                                                                       aTTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAc  >  2:858200/1‑93 (MQ=255)

GGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC  >  NC_000913/3374173‑3374352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`