BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,376,376	A→C	intergenic (‑90/+129)	rplM ← / ← yhcM	50S ribosomal subunit protein L13/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,376,376	0	A	C	100.0%	792.6 / NA	246	intergenic (‑90/+129)	rplM/yhcM	50S ribosomal subunit protein L13/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (125/121); total (125/121)

Only 100 of 257 total aligned reads displayed.

TTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGG  >  NC_000913/3376286‑3376465

  aaaaGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCcccc                                                                                       >  2:2457824/1‑93 (MQ=255)

    aaGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCtt                                                                                     <  2:2523670/93‑1 (MQ=255)

      gCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCg                                                                                   >  2:5449399/1‑93 (MQ=255)

       cTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGa                                                                                  <  1:2548567/93‑1 (MQ=255)

         tACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAt                                                                                <  1:5535726/93‑1 (MQ=255)

         tACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAAt                                                                                >  2:3781537/1‑93 (MQ=255)

           cccAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAg                                                                              <  2:4713089/93‑1 (MQ=255)

            ccAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCACACCTCCCCCTTCGAATAGc                                                                             >  2:965423/1‑93 (MQ=255)

            ccAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGc                                                                             <  1:4999814/93‑1 (MQ=255)

             cAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGcc                                                                            >  1:90809/1‑93 (MQ=255)

             cAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGcc                                                                            <  1:2221273/93‑1 (MQ=255)

              aataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAAACTCCCCCTTCGAATAGCCt                                                                           >  1:5883963/1‑93 (MQ=255)

               ataaataGTTTCACGTTGGCGAACACCCAACCGTCTTCAATTGTTGAGGTCCCCACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa                                                                          <  2:212666/93‑1 (MQ=255)

               ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa                                                                          <  1:276734/93‑1 (MQ=255)

               ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa                                                                          <  2:79380/93‑1 (MQ=255)

               ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa                                                                          <  2:188748/93‑1 (MQ=255)

               ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa                                                                          <  1:4708775/93‑1 (MQ=255)

               ataaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTa                                                                          <  1:3869659/93‑1 (MQ=255)

                taaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTac                                                                         >  2:5645861/1‑92 (MQ=255)

                taaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTac                                                                         <  2:1784546/93‑2 (MQ=255)

                 aaataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTacg                                                                        >  2:6180785/1‑91 (MQ=255)

                  aataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGc                                                                       >  2:4391774/1‑93 (MQ=255)

                   ataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGcc                                                                      <  2:1117590/93‑1 (MQ=255)

                   ataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGcc                                                                      >  2:5566089/1‑93 (MQ=255)

                    taGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCa                                                                     <  1:2919481/93‑1 (MQ=255)

                    taGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCa                                                                     >  2:4533422/1‑93 (MQ=255)

                     aGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACCCGACAAAGTCCGGAAAACCTACCCCCTCGAATAGCCTACGCCAg                                                                    >  2:1207881/1‑93 (MQ=255)

                      gTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGc                                                                   >  2:3625698/1‑93 (MQ=255)

                         acacGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcaca                                                                >  2:4828562/1‑93 (MQ=255)

                           acGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcacaca                                                              <  1:3041895/93‑1 (MQ=255)

                             gTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaa                                                            >  2:240412/1‑93 (MQ=255)

                              ttGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaa                                                           <  1:4126851/93‑1 (MQ=255)

                               tGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaaa                                                          >  2:2219729/1‑93 (MQ=255)

                                  tGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAACCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGtt                                                       <  1:1877090/93‑1 (MQ=255)

                                  tGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGtt                                                       <  1:2196303/93‑1 (MQ=255)

                                     acacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTg                                                    >  1:3574551/1‑93 (MQ=255)

                                      cacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTgg                                                   >  1:117915/1‑93 (MQ=255)

                                        cccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGa                                                 >  2:4257733/1‑93 (MQ=255)

                                        cccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGa                                                 >  1:108700/1‑93 (MQ=255)

                                         ccgaaCGTCATCAAGTGGTTGGGCTTAAACGGCCAAGTCCCGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaa                                                <  2:2007897/90‑1 (MQ=255)

                                         ccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaa                                                >  2:1395201/1‑93 (MQ=255)

                                          cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaa                                               >  1:4357019/1‑93 (MQ=255)

                                          cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaa                                               >  2:5581702/1‑93 (MQ=255)

                                           aaaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaa                                              <  2:3504560/93‑1 (MQ=255)

                                           aaaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaa                                              >  1:5200931/1‑93 (MQ=255)

                                            aaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaa                                             >  2:3842498/1‑93 (MQ=255)

                                            aaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGACAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaa                                             <  1:3710364/93‑1 (MQ=255)

                                             aCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaa                                            >  1:3797677/1‑93 (MQ=255)

                                              cGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaaa                                           <  2:4216893/93‑1 (MQ=255)

                                              cGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaaa                                           <  2:285426/93‑1 (MQ=255)

                                               gTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAc                                          <  1:2481332/93‑1 (MQ=255)

                                                 cTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTAGGAAAAAAACtt                                        <  1:4792048/93‑1 (MQ=255)

                                                  ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                       >  2:3042283/1‑93 (MQ=255)

                                                  ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                       <  2:5734903/93‑1 (MQ=255)

                                                  ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGACTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                       >  2:1057644/1‑93 (MQ=255)

                                                  ctCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                       <  2:1616004/92‑1 (MQ=255)

                                                   tCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTc                                      >  2:1456120/1‑93 (MQ=255)

                                                   tCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTc                                      <  2:5864504/93‑1 (MQ=255)

                                                    cAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCt                                     <  2:4965771/93‑1 (MQ=255)

                                                     aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                    <  1:458336/93‑1 (MQ=255)

                                                     aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                    >  2:6272127/1‑93 (MQ=255)

                                                     aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                    >  1:5835621/1‑93 (MQ=255)

                                                      aTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTg                                   <  1:1322990/93‑1 (MQ=255)

                                                      aTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTg                                   <  1:711807/93‑1 (MQ=255)

                                                       ttgttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGt                                  <  1:4073298/93‑1 (MQ=255)

                                                       ttgttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGt                                  <  1:5297065/93‑1 (MQ=255)

                                                         gttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa                                <  2:5281814/93‑1 (MQ=255)

                                                         gttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa                                <  2:1505416/93‑1 (MQ=255)

                                                         gttgAGGTGCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa                                <  2:1092197/93‑1 (MQ=255)

                                                          ttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAAc                               <  2:5180291/93‑1 (MQ=255)

                                                           tgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACg                              >  1:1498197/1‑93 (MQ=255)

                                                            gAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGt                             <  2:3164591/93‑1 (MQ=255)

                                                            gAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGt                             >  2:4676303/1‑93 (MQ=255)

                                                              ggTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgg                           >  2:866776/1‑93 (MQ=255)

                                                               gTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTggg                          >  1:1074673/1‑93 (MQ=255)

                                                               gTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTggg                          >  2:4062899/1‑93 (MQ=255)

                                                                ttCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg                         <  2:648747/93‑1 (MQ=255)

                                                                  cacaCGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTc                       <  1:6131032/93‑1 (MQ=255)

                                                                   acacGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCg                      <  2:3918421/93‑1 (MQ=255)

                                                                   acacGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCg                      >  2:4766912/1‑93 (MQ=255)

                                                                      cGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAg                   >  2:3356136/1‑93 (MQ=255)

                                                                      cGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAg                   >  1:3931356/1‑93 (MQ=255)

                                                                        aCAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGa                 >  2:5108593/1‑93 (MQ=255)

                                                                         cAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAt                <  1:6019684/93‑1 (MQ=255)

                                                                         cAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAt                >  1:3231904/1‑93 (MQ=255)

                                                                          aaaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCCCAGGAtt               >  1:1710395/1‑93 (MQ=255)

                                                                           aaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATta              <  1:5434725/93‑1 (MQ=255)

                                                                           aaGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATta              <  2:6071305/93‑1 (MQ=255)

                                                                            aGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATtat             <  1:3454088/93‑1 (MQ=255)

                                                                             gTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATtata            <  1:1973397/93‑1 (MQ=255)

                                                                              tCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATag           >  2:2570158/1‑93 (MQ=255)

                                                                               ccGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATaga          <  1:3199864/93‑1 (MQ=255)

                                                                                 ggCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAgaga        >  1:5119110/1‑93 (MQ=255)

                                                                                    aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt     >  2:1683010/1‑93 (MQ=255)

                                                                                    aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt     >  2:3320218/1‑93 (MQ=255)

                                                                                    aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt     <  1:3433604/93‑1 (MQ=255)

                                                                                     aaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTc    <  2:1310322/93‑1 (MQ=255)

                                                                                      aCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCg   <  1:5576002/93‑1 (MQ=255)

                                                                                       ccTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTTGGGTCGCAGGATTATAGAGAAGTCgg  >  1:4527017/1‑93 (MQ=255)

                                                                                       ccTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCgg  <  1:1575334/93‑1 (MQ=255)

TTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGG  >  NC_000913/3376286‑3376465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`