BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,376,394	T→C	intergenic (‑108/+111)	rplM ← / ← yhcM	50S ribosomal subunit protein L13/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,376,394	0	T	C	100.0%	835.8 / NA	255	intergenic (‑108/+111)	rplM/yhcM	50S ribosomal subunit protein L13/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (130/125); total (130/125)

Only 100 of 258 total aligned reads displayed.

AATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATCGACCCCT  >  NC_000913/3376304‑3376483

 ataGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGcc                                                                                        <  1:3994954/93‑1 (MQ=255)

  taGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCa                                                                                       >  2:4533422/1‑93 (MQ=255)

   aGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACCCGACAAAGTCCGGAAAACCTACCCCCTCGAATAGCCTACGCCAg                                                                                      >  2:1207881/1‑93 (MQ=255)

     ttACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGca                                                                                    >  2:1955567/1‑93 (MQ=255)

      tACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcac                                                                                   >  2:1436370/1‑93 (MQ=255)

         acGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGcacaca                                                                                <  1:1492175/93‑1 (MQ=255)

           gTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaa                                                                              <  2:5764146/93‑1 (MQ=255)

           gTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaa                                                                              >  2:240412/1‑93 (MQ=255)

             tGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaaa                                                                            <  1:1285860/93‑1 (MQ=255)

             tGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaaa                                                                            >  2:2219729/1‑93 (MQ=255)

             tGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACaaaaa                                                                            <  1:5171567/93‑1 (MQ=255)

              ggTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAg                                                                           >  1:1082625/1‑93 (MQ=255)

              ggTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAg                                                                           >  1:1122776/1‑93 (MQ=255)

               gTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGt                                                                          <  1:316062/93‑1 (MQ=255)

                tGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGtt                                                                         <  1:2196303/93‑1 (MQ=255)

                   acacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTg                                                                      >  2:3809964/1‑93 (MQ=255)

                    catccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTgg                                                                     <  1:5906946/90‑1 (MQ=255)

                    cacCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTgg                                                                     >  1:3751665/1‑93 (MQ=255)

                      cccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGa                                                                   >  2:1857001/1‑93 (MQ=255)

                       ccAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaa                                                                  >  2:1395201/1‑93 (MQ=255)

                        cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaa                                                                 >  1:4357019/1‑93 (MQ=255)

                        cAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaa                                                                 >  2:5581702/1‑93 (MQ=255)

                         aaaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaa                                                                >  1:5200931/1‑93 (MQ=255)

                          aaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaa                                                               >  2:4445646/1‑93 (MQ=255)

                          aaCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGACAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaa                                                               <  1:3710364/93‑1 (MQ=255)

                           aCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaa                                                              >  2:4948009/1‑93 (MQ=255)

                            cGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaaa                                                             <  1:408626/93‑1 (MQ=255)

                            cGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGaaaaaaa                                                             <  2:285426/93‑1 (MQ=255)

                             gTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAAc                                                            <  2:5178959/93‑1 (MQ=255)

                               cTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACtt                                                          <  2:4979530/93‑1 (MQ=255)

                               cTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACtt                                                          >  1:4506031/1‑93 (MQ=255)

                               cTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACtt                                                          >  2:6088159/1‑93 (MQ=255)

                               cTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTAGGAAAAAAACtt                                                          <  1:4792048/93‑1 (MQ=255)

                                ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                                         >  2:3042283/1‑93 (MQ=255)

                                ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                                         >  2:2509240/1‑93 (MQ=255)

                                ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                                         >  2:1133119/1‑93 (MQ=255)

                                ttCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGACTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACttt                                                         >  2:1057644/1‑93 (MQ=255)

                                 tCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTc                                                        <  2:5864504/93‑1 (MQ=255)

                                 tCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTc                                                        >  2:1456120/1‑93 (MQ=255)

                                  cAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCt                                                       <  2:2058461/93‑1 (MQ=255)

                                   aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                                      >  2:4217589/1‑93 (MQ=255)

                                   aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                                      >  1:1888252/1‑93 (MQ=255)

                                   aaTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCtt                                                      >  1:5835621/1‑93 (MQ=255)

                                    aTTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTg                                                     <  1:5314710/93‑1 (MQ=255)

                                      tgttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTa                                                   <  1:3465069/93‑1 (MQ=255)

                                       gttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa                                                  <  2:5530030/93‑1 (MQ=255)

                                       gttgAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa                                                  <  2:1505416/93‑1 (MQ=255)

                                       gttgAGGTGCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTaa                                                  <  2:1092197/93‑1 (MQ=255)

                                          gAGGTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGt                                               <  2:3164591/93‑1 (MQ=255)

                                            ggTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgg                                             >  2:866776/1‑93 (MQ=255)

                                             gTTCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTggg                                            <  1:170099/93‑1 (MQ=255)

                                              ttCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg                                           >  1:4227706/1‑93 (MQ=255)

                                              ttCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg                                           <  2:648747/93‑1 (MQ=255)

                                              ttCACACGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg                                           >  2:4699956/1‑93 (MQ=255)

                                              tccacaCGACAAAGCCCGGCAACCCTCCCACTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTgggg                                           <  1:3916541/91‑1 (MQ=255)

                                                cacaCGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTc                                         <  1:6131032/93‑1 (MQ=255)

                                                 acacGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCg                                        <  2:3918421/93‑1 (MQ=255)

                                                 acacGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCg                                        >  1:3316372/1‑93 (MQ=255)

                                                 acacGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCg                                        >  2:4766912/1‑93 (MQ=255)

                                                   ccGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCa                                      <  2:5805185/92‑1 (MQ=255)

                                                   acGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCa                                      <  1:544525/93‑1 (MQ=255)

                                                    cGACAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAg                                     >  2:3356136/1‑93 (MQ=255)

                                                      aCAAAGTCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGa                                   <  1:1988278/93‑1 (MQ=255)

                                                        aaaGTCTGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAtt                                 >  2:3590300/1‑93 (MQ=255)

                                                        aaaGTCCGGCAATCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGAtt                                 <  2:3640834/93‑1 (MQ=255)

                                                            tCCGGCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATag                             >  2:2570158/1‑93 (MQ=255)

                                                              cGGCAAACCTCCCCCTTTGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATagag                           <  2:40211/93‑1 (MQ=255)

                                                               ggCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAgaga                          <  1:3437407/93‑1 (MQ=255)

                                                               ggCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAgaga                          <  1:4918760/93‑1 (MQ=255)

                                                                gCAAACCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAGCTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGaa                         <  2:5250752/93‑1 (MQ=255)

                                                                  aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt                       >  2:1683010/1‑93 (MQ=255)

                                                                  aaaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGt                       >  2:3320218/1‑93 (MQ=255)

                                                                   aaCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTc                      <  2:1310322/93‑1 (MQ=255)

                                                                    aCCTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCg                     <  1:5576002/93‑1 (MQ=255)

                                                                     ccTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTTGGGTCGCAGGATTATAGAGAAGTCgg                    >  1:4527017/1‑93 (MQ=255)

                                                                     ccTCCCCCTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCgg                    <  1:1575334/93‑1 (MQ=255)

                                                                      ctcccccTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCggg                   >  2:4641657/4‑93 (MQ=255)

                                                                      ctcccccTTCGAAGAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCggg                   <  2:4178677/90‑1 (MQ=255)

                                                                       tcccccTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCgggg                  >  2:967461/3‑93 (MQ=255)

                                                                         ccccTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTc                >  1:2549474/1‑93 (MQ=255)

                                                                          cccTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCa               <  2:5714067/93‑1 (MQ=255)

                                                                          cccTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCa               >  1:1000198/1‑93 (MQ=255)

                                                                            cTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCaaa             <  1:692195/93‑1 (MQ=255)

                                                                            cTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCaaa             >  1:3194084/1‑93 (MQ=255)

                                                                            cTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCaaa             <  1:2641211/93‑1 (MQ=255)

                                                                            cTTCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACATGGGGTCGCAGGATTATAGAGAAGTCGGGGTCaaa             <  1:4458679/93‑1 (MQ=255)

                                                                            cTTCGAATAGCCTACGCCAGCACACAAAAAGCTTTGGGAAAAAAACTTTCTTGTAACGAGGGGTCGCAGGATTATAGAGAAGTCGGGGTCaaa             >  1:3829653/1‑93 (MQ=255)

                                                                             ttCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAg            >  1:754092/1‑93 (MQ=255)

                                                                             ttCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAg            >  2:852868/1‑93 (MQ=255)

                                                                             ttCGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAg            <  1:2836462/93‑1 (MQ=255)

                                                                               cGAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGAt          <  1:2443387/93‑1 (MQ=255)

                                                                                gAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATc         >  2:4114103/1‑93 (MQ=255)

                                                                                gAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATc         >  2:3745751/1‑93 (MQ=255)

                                                                                gAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATc         >  2:6248714/1‑93 (MQ=255)

                                                                                gAATAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATc         <  2:6287703/93‑1 (MQ=255)

                                                                                 aaTAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATCg        >  2:1643873/1‑93 (MQ=255)

                                                                                 aaTAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATCg        >  1:2961230/1‑93 (MQ=255)

                                                                                 aaTAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATCg        >  1:178325/1‑93 (MQ=255)

                                                                                   tAGCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATCGAc      <  1:4653409/93‑1 (MQ=255)

                                                                                     gCCTACGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATCGAccc    >  2:341113/1‑93 (MQ=255)

AATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATAGCCTATGCCAGCACACAAAAAGTTTTGGGAAAAAAACTTTCTTGTAACGTGGGGTCGCAGGATTATAGAGAAGTCGGGGTCAAAGATCGACCCCT  >  NC_000913/3376304‑3376483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`