BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,418,628	A→G	A286A (GCA→GCG)	b3269 →	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,418,628	0	A	G	100.0%	811.3 / NA	253	A286A (GCA→GCG)	b3269	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (124/129); total (124/129)

Only 100 of 255 total aligned reads displayed.

TTTAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCAGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGCG  >  NC_000913/3418538‑3418717

tttAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGt                                                                                         >  2:1011176/1‑93 (MQ=255)

tttAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGt                                                                                         >  2:5093882/1‑93 (MQ=255)

 ttAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTg                                                                                        >  2:5439875/1‑93 (MQ=255)

 ttAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTg                                                                                        >  1:2939756/1‑93 (MQ=255)

     ttCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCtt                                                                                    >  2:1141107/1‑93 (MQ=255)

      tCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTa                                                                                   <  2:2031347/93‑1 (MQ=255)

        cTGAACTGGCAGCCTTAACGCTGTTACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATTCGAGCTGGGATCCAGGAGGTGCCTTATg                                                                                 >  2:2623365/1‑93 (MQ=255)

        cTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATg                                                                                 >  1:4337852/1‑93 (MQ=255)

         tGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATgg                                                                                >  1:170115/1‑93 (MQ=255)

         tGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATgg                                                                                <  2:4961436/93‑1 (MQ=255)

           aaCTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTc                                                                              >  1:1044545/1‑93 (MQ=255)

           aaCTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTc                                                                              <  2:41421/93‑1 (MQ=255)

            aCTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCa                                                                             >  1:4851435/1‑93 (MQ=255)

             cTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCaa                                                                            <  1:1219497/93‑1 (MQ=255)

               ggCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAAGCGGTGCCTTATGGTCAACa                                                                          >  1:3267564/1‑93 (MQ=255)

                 cAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATg                                                                        <  2:918992/93‑1 (MQ=255)

                  aGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGa                                                                       >  1:5329484/1‑93 (MQ=255)

                  aGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGa                                                                       <  2:2428449/93‑1 (MQ=255)

                  aGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGa                                                                       <  1:1648681/93‑1 (MQ=255)

                  aGCCTGAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGa                                                                       <  2:1320732/93‑1 (MQ=255)

                    ccTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAg                                                                     <  1:334986/93‑1 (MQ=255)

                    ccTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAg                                                                     >  1:4646940/1‑93 (MQ=255)

                     cTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGc                                                                    <  1:4733817/93‑1 (MQ=255)

                      ttAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCg                                                                   <  1:2876868/93‑1 (MQ=255)

                       tAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCgg                                                                  <  2:659248/93‑1 (MQ=255)

                        aaCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGc                                                                 <  2:4941116/93‑1 (MQ=255)

                        aaCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGc                                                                 <  1:1876669/93‑1 (MQ=255)

                         aCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCt                                                                <  1:2604959/93‑1 (MQ=255)

                         aCGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCt                                                                >  1:545658/1‑93 (MQ=255)

                            cTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCTTTATGGTCAACATGAAGCGGCTCgg                                                             <  2:5546562/93‑1 (MQ=255)

                            cTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGATCgg                                                             >  1:6241066/1‑93 (MQ=255)

                             tGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGt                                                            >  2:5699218/1‑93 (MQ=255)

                              ggCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTc                                                           <  2:5767564/93‑1 (MQ=255)

                               gCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCa                                                          >  2:1897917/1‑93 (MQ=255)

                                  cTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTg                                                       >  1:3684905/1‑93 (MQ=255)

                                  cTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTg                                                       >  1:3986057/1‑93 (MQ=255)

                                    ttCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTggg                                                     >  2:5126966/1‑93 (MQ=255)

                                     tCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGa                                                    <  1:4404233/93‑1 (MQ=255)

                                     tCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGa                                                    <  2:4257589/93‑1 (MQ=255)

                                      cGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGAt                                                   <  2:2668246/93‑1 (MQ=255)

                                      cGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGAt                                                   <  2:4399581/93‑1 (MQ=255)

                                        gTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTa                                                 >  1:2772303/1‑93 (MQ=255)

                                        gTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTa                                                 <  2:85162/93‑1 (MQ=255)

                                        gTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTa                                                 >  1:1323690/1‑93 (MQ=255)

                                         tttATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTAc                                                <  2:1159920/93‑1 (MQ=255)

                                           tataCATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTTACTGCGAGTAccc                                              >  1:3618899/1‑93 (MQ=255)

                                           tataCATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTAccc                                              >  2:3345342/1‑93 (MQ=255)

                                             taCATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCaa                                            >  1:122583/1‑93 (MQ=255)

                                              aCATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAAc                                           <  1:5448292/93‑1 (MQ=255)

                                                aTCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAAccc                                         >  1:5883651/1‑93 (MQ=255)

                                                aTCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAAccc                                         <  2:4312486/93‑1 (MQ=255)

                                                 tCTGCATTTATCGCCGAGATTATCCGCGCGGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCg                                        <  2:2650247/93‑1 (MQ=255)

                                                  cTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCgg                                       <  2:3878326/93‑1 (MQ=255)

                                                   tGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGt                                      <  2:4638845/93‑1 (MQ=255)

                                                   tGCATTTATCGCCGAGATTAGCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGt                                      <  1:5085141/93‑1 (MQ=255)

                                                    gCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGtt                                     <  2:3595076/93‑1 (MQ=255)

                                                     cATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTta                                    <  1:661962/93‑1 (MQ=255)

                                                     cATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTta                                    >  2:896177/1‑93 (MQ=255)

                                                     cATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTta                                    <  2:5688751/93‑1 (MQ=255)

                                                      aTTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtac                                   >  2:2117401/1‑93 (MQ=255)

                                                      aTTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtac                                   >  2:1438619/1‑93 (MQ=255)

                                                          aTCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCCACCCGGTtacgcta                               >  1:2281139/1‑93 (MQ=255)

                                                           tCGCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtacgctac                              <  2:1612144/93‑1 (MQ=255)

                                                             gCCGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTtacgctacgc                            <  2:1807242/93‑1 (MQ=255)

                                                              cctagaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCGACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGcc                           <  2:1474738/90‑1 (MQ=255)

                                                              ccGAGCTTATCCGCGCTGGGATCCAGAAGCTGCATTATGGTCAACATGAAGCGGCTCGGTAACCGGGATTTCCCAGCCCGGTtacgctagggc                           >  2:1746840/1‑89 (MQ=255)

                                                              ccGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGcc                           <  2:2329212/93‑1 (MQ=255)

                                                              ccGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGcc                           >  1:5289542/1‑93 (MQ=255)

                                                              ccGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGcc                           <  1:5110163/93‑1 (MQ=255)

                                                               cGAGATTATCCGCGCTGTGATCCAGGCGATGCATTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCACCCCGGTTACGCTACGCCa                          <  2:6021460/93‑1 (MQ=255)

                                                               cGAGATTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCa                          <  1:1101475/93‑1 (MQ=255)

                                                                gagaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAg                         <  1:2170356/93‑1 (MQ=255)

                                                                gagaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGGTACGCTACGCCAg                         >  2:3325464/1‑93 (MQ=255)

                                                                 agaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAgg                        >  2:1353305/1‑93 (MQ=255)

                                                                 agaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAAACCGGTTACGCTACGCCAgg                        >  1:63928/1‑93 (MQ=255)

                                                                  gaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGt                       >  1:5979086/1‑93 (MQ=255)

                                                                  gaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGt                       <  1:6212237/93‑1 (MQ=255)

                                                                  gaTTATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGt                       >  2:39267/1‑93 (MQ=255)

                                                                    ttATCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCa                     >  1:5007642/1‑93 (MQ=255)

                                                                      aTCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCatt                   >  1:4052231/1‑93 (MQ=255)

                                                                      aTCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCatt                   <  1:3745168/93‑1 (MQ=255)

                                                                       tCCGCGCTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCatta                  <  1:5215457/93‑1 (MQ=255)

                                                                           cgcTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTcc              <  2:4207275/93‑1 (MQ=255)

                                                                            gcTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTccc             <  2:4529537/93‑1 (MQ=255)

                                                                             cTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTcccc            <  1:3429633/93‑1 (MQ=255)

                                                                             cTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTcccc            <  1:3127671/93‑1 (MQ=255)

                                                                             cTGGGATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTcccc            >  2:292329/1‑93 (MQ=255)

                                                                                ggATCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAgg         <  1:1469251/93‑1 (MQ=255)

                                                                                  aTCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGGTACGCTACGCCAGGTCATTATTCCCCAGGCa       >  1:3524855/1‑93 (MQ=255)

                                                                                   tCCAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAt      <  2:2186135/93‑1 (MQ=255)

                                                                                    ccAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAtt     >  1:881076/1‑93 (MQ=255)

                                                                                    ccAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAtt     <  2:3226149/93‑1 (MQ=255)

                                                                                    ccAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAtt     >  1:5933687/1‑93 (MQ=255)

                                                                                    ccAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAtt     <  2:5283806/93‑1 (MQ=255)

                                                                                    ccAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCAtt     <  2:285811/93‑1 (MQ=255)

                                                                                     cAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGGCAGGTCATTATTCCCCAGGCATTg    >  1:798859/1‑93 (MQ=255)

                                                                                     cAGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTg    >  1:1550044/1‑93 (MQ=255)

                                                                                      aGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCCGGTCATTATTCCCCAGGCATTGc   >  2:2265537/1‑93 (MQ=255)

                                                                                      aGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGc   >  2:5820475/1‑93 (MQ=255)

                                                                                      aGGCGGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGc   >  2:3726798/1‑93 (MQ=255)

TTTAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCAGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGCG  >  NC_000913/3418538‑3418717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`