BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,436,837	T→C	T104A (ACC→GCC)	yhdN ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,436,837	0	T	C	99.7%	928.6 / ‑5.6	287	T104A (ACC→GCC)	yhdN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (130/156); minor base A (1/0); total (131/156)
Fisher's exact test for biased strand distribution p-value = 4.56e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 292 total aligned reads displayed.

CAGCTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATACCTT  >  NC_000913/3436747‑3436926

cAGCTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCCACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCAc                                                                                         <  1:4550463/93‑1 (MQ=255)

 aGCTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACt                                                                                        <  2:5165462/93‑1 (MQ=255)

   cTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCa                                                                                      <  1:121975/93‑1 (MQ=255)

   cTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCa                                                                                      <  2:2316439/93‑1 (MQ=255)

   cTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACCCa                                                                                      <  2:404600/93‑1 (MQ=255)

      aCCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATc                                                                                   <  2:6027778/93‑1 (MQ=255)

      aCCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATc                                                                                   >  1:1525496/1‑93 (MQ=255)

       ccAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATcc                                                                                  <  1:669595/93‑1 (MQ=255)

        cAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCa                                                                                 >  2:2863939/1‑93 (MQ=255)

        cAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCa                                                                                 <  1:356224/93‑1 (MQ=255)

         aaTGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAg                                                                                <  1:2215186/93‑1 (MQ=255)

         aaTGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAg                                                                                <  1:3823992/93‑1 (MQ=255)

           tGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAACt                                                                              >  1:1699689/1‑93 (MQ=255)

            gCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCtt                                                                             >  1:1660039/1‑93 (MQ=255)

            gCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCtt                                                                             >  2:1642546/1‑93 (MQ=255)

               atacatacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTc                                                                          >  1:4304879/1‑93 (MQ=255)

                tacatacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCg                                                                         >  2:340469/1‑93 (MQ=255)

                 acatacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGc                                                                        >  2:4518724/1‑93 (MQ=255)

                    tacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGc                                                                     >  2:5720433/1‑93 (MQ=255)

                    tacatacTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGc                                                                     >  1:3323725/1‑93 (MQ=255)

                           tCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAAtt                                                              >  1:712987/1‑93 (MQ=255)

                           tCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAAtt                                                              >  1:5046194/1‑93 (MQ=255)

                           tCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAAtt                                                              >  2:5125061/1‑93 (MQ=255)

                            ccACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTc                                                             <  1:5766021/93‑1 (MQ=255)

                            ccACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTc                                                             <  2:4260502/93‑1 (MQ=255)

                              aCTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAGAATCGGCACTCAATCCAGCTTGCCGCAGCTTCAATTCCa                                                           <  2:4763234/93‑1 (MQ=255)

                               cTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAg                                                          >  1:2869459/1‑93 (MQ=255)

                               cTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAg                                                          >  1:1975847/1‑93 (MQ=255)

                               cTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAg                                                          <  1:4943560/93‑1 (MQ=255)

                               cTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAg                                                          <  1:1449682/93‑1 (MQ=255)

                               cTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAg                                                          >  1:4204130/1‑93 (MQ=255)

                               cTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAg                                                          >  1:3175570/1‑93 (MQ=255)

                                tAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGt                                                         >  1:4590757/1‑93 (MQ=255)

                                tAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGt                                                         >  1:1756829/1‑93 (MQ=255)

                                tAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGt                                                         <  1:4856622/93‑1 (MQ=255)

                                tAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGt                                                         >  1:3417988/1‑93 (MQ=255)

                                 aGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTa                                                        <  2:3770268/93‑1 (MQ=255)

                                  gTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTaa                                                       <  2:5297559/93‑1 (MQ=255)

                                  gTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTaa                                                       >  2:3885960/1‑93 (MQ=255)

                                   ttATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAAt                                                      >  2:5844198/1‑93 (MQ=255)

                                   ttATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAAt                                                      >  1:3627528/1‑93 (MQ=255)

                                    tATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATg                                                     <  1:2713197/93‑1 (MQ=255)

                                     aTCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGa                                                    >  2:5942873/1‑93 (MQ=255)

                                       cGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACa                                                  <  2:1855267/93‑1 (MQ=255)

                                        gTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACaa                                                 <  1:3082490/93‑1 (MQ=255)

                                         ttGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAAt                                                <  1:5591492/93‑1 (MQ=255)

                                         ttGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAAt                                                <  1:5286649/93‑1 (MQ=255)

                                         ttGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTACAGTAATGACAAt                                                >  1:3468097/1‑93 (MQ=255)

                                          tGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATc                                               <  2:4348083/93‑1 (MQ=255)

                                          tGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATc                                               <  1:915733/93‑1 (MQ=255)

                                          tGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATc                                               <  2:1065540/93‑1 (MQ=255)

                                           gATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCg                                              >  1:1828033/1‑93 (MQ=255)

                                            aTTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGa                                             <  2:2737664/93‑1 (MQ=255)

                                             ttttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGAc                                            <  1:5407616/93‑1 (MQ=255)

                                             ttttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGAc                                            >  2:1955198/1‑93 (MQ=255)

                                             ttttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGAc                                            <  2:1385468/93‑1 (MQ=255)

                                              tttGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACg                                           <  1:2921930/93‑1 (MQ=255)

                                                tGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGc                                         <  2:3462993/93‑1 (MQ=255)

                                                 gTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCt                                        >  1:5220580/1‑93 (MQ=255)

                                                   ccAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTaa                                      <  1:1041624/93‑1 (MQ=255)

                                                   ccAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTaa                                      <  1:4733238/93‑1 (MQ=255)

                                                    caacaaCTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAAc                                     >  2:1529283/1‑93 (MQ=255)

                                                     aacaacTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAAcc                                    <  2:2064283/93‑1 (MQ=255)

                                                       caacTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACctc                                  <  2:616310/93‑1 (MQ=255)

                                                       caacTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACctc                                  <  2:5437832/93‑1 (MQ=255)

                                                        aacTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACctct                                 >  1:6308872/1‑93 (MQ=255)

                                                         acTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCACTTCCAGTAATGACAATCGACGGCTGACCTCtt                                >  1:4007434/1‑93 (MQ=255)

                                                         acTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCtt                                >  2:3533512/1‑93 (MQ=255)

                                                         acTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCtt                                <  1:2065037/93‑1 (MQ=255)

                                                          cTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTg                               <  2:83242/93‑1 (MQ=255)

                                                          cTTGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTg                               <  2:5370214/93‑1 (MQ=255)

                                                           ttGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGa                              >  2:3349347/1‑93 (MQ=255)

                                                           ttGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGa                              <  2:4183477/93‑1 (MQ=255)

                                                           ttGTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGa                              <  1:1340097/93‑1 (MQ=255)

                                                             gTCAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGata                            >  1:5721549/1‑93 (MQ=255)

                                                               cAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATAtt                          <  2:2995631/93‑1 (MQ=255)

                                                               cAGCATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATAtt                          <  2:5508007/93‑1 (MQ=255)

                                                                  cATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCg                       <  1:599281/93‑1 (MQ=255)

                                                                  cATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCg                       >  2:4831458/1‑93 (MQ=255)

                                                                  cATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCg                       <  2:775081/93‑1 (MQ=255)

                                                                  cATAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCg                       <  2:2351720/93‑1 (MQ=255)

                                                                    tAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGa                     >  2:2565749/1‑93 (MQ=255)

                                                                    tAATCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGa                     <  1:4368365/93‑1 (MQ=255)

                                                                     aaTCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGat                    <  1:5210461/93‑1 (MQ=255)

                                                                     aaTCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGat                    >  1:4467443/1‑93 (MQ=255)

                                                                      aTCGCCGCGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGatc                   >  1:2474199/1‑93 (MQ=255)

                                                                        cgccgcGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGatcat                 <  1:1138112/93‑1 (MQ=255)

                                                                         gccgcGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGatcatg                >  2:3236991/1‑92 (MQ=255)

                                                                          ccgcGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCg               <  1:1019218/93‑1 (MQ=255)

                                                                          ccgcGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCg               >  1:5933831/1‑93 (MQ=255)

                                                                          ccgcGTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCg               <  2:2110851/93‑1 (MQ=255)

                                                                           cgcgTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGt              >  2:3089613/1‑93 (MQ=255)

                                                                            gcgTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTg             >  1:4098547/1‑93 (MQ=255)

                                                                             cgTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGa            <  2:1216740/93‑1 (MQ=255)

                                                                              gTAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAAATCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGAc           >  2:2206325/1‑93 (MQ=255)

                                                                               tAAAAAATCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACg          >  1:3680501/1‑93 (MQ=255)

                                                                                  aaaaTCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGAt       >  1:2382511/1‑93 (MQ=255)

                                                                                   aaaTCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATa      <  1:141354/93‑1 (MQ=255)

                                                                                      tCGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATACCt   >  1:5457459/1‑93 (MQ=255)

                                                                                       cGGCACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATACCtt  <  1:3265851/93‑1 (MQ=255)

CAGCTCACCAATGCGATACATACATACTCCACTAGTTATCGTTGATTTTGTCCAACAACTTGTCAGCATAATCGCCGCGTAAAAAATCGGTACTCAATCCAGCTTGTCGCAGCTTCAATTCCAGTAATGACAATCGACGGCTAACCTCTTGATATTGCGGATCATCGTGACGGATACCTT  >  NC_000913/3436747‑3436926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`