BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,507,831	T→C	T262A (ACT→GCT)	yhfX ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,507,831	0	T	C	100.0%	844.1 / NA	260	T262A (ACT→GCT)	yhfX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (140/120); total (140/120)

Only 100 of 266 total aligned reads displayed.

AGCTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGTGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGAAGGCGCGT  >  NC_000913/3507741‑3507920

aGCTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAgcgc                                                                                         <  1:194705/93‑1 (MQ=255)

  cTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGccc                                                                                       >  2:4917758/1‑93 (MQ=255)

    gTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGt                                                                                     >  1:3290252/1‑93 (MQ=255)

    gTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGt                                                                                     >  2:1893503/1‑93 (MQ=255)

     tCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTc                                                                                    >  1:6136061/1‑93 (MQ=255)

     tCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTc                                                                                    <  2:160675/93‑1 (MQ=255)

         cACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAgcg                                                                                >  2:83394/1‑93 (MQ=255)

          aCGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAgcgc                                                                               <  2:5907365/93‑1 (MQ=255)

          aCGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAgcgc                                                                               >  2:5563599/1‑93 (MQ=255)

          aCGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGGTTGCCGGAATAGCGCCCGTCAgcgc                                                                               >  2:2356863/1‑93 (MQ=255)

            ggAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCAt                                                                             <  2:4425231/93‑1 (MQ=255)

            ggAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCAt                                                                             >  2:1070657/1‑93 (MQ=255)

             gAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATg                                                                            >  1:3083275/1‑93 (MQ=255)

             gAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATg                                                                            >  2:5995418/1‑93 (MQ=255)

               aaTGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGAc                                                                          >  2:2602276/1‑93 (MQ=255)

                 tgatgGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCg                                                                        >  2:3769077/1‑93 (MQ=255)

                 tgatgGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCg                                                                        <  2:5269212/93‑1 (MQ=255)

                 tgatgGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCg                                                                        <  2:926758/93‑1 (MQ=255)

                  gatgGGAGNTTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCgg                                                                       <  2:5765582/93‑1 (MQ=255)

                  gatgGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCgg                                                                       >  1:648224/1‑93 (MQ=255)

                   atgGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCggg                                                                      >  1:2751283/1‑93 (MQ=255)

                   atgGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCggg                                                                      >  1:2184283/1‑93 (MQ=255)

                    tgGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGt                                                                     >  2:4066790/1‑93 (MQ=255)

                       gagaTTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCg                                                                  >  2:1093986/1‑93 (MQ=255)

                          aTTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGct                                                               >  1:4725623/1‑92 (MQ=255)

                          aTTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCa                                                               <  1:6284494/93‑1 (MQ=255)

                          aTTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCa                                                               <  2:653726/93‑1 (MQ=255)

                          aTTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCa                                                               >  1:629693/1‑93 (MQ=255)

                          aTTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCa                                                               <  1:4307301/93‑1 (MQ=255)

                            ttCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATg                                                             >  2:301663/1‑93 (MQ=255)

                            ttCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATg                                                             <  1:5643915/93‑1 (MQ=255)

                             tCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGCCCGGGTTCGGCATGa                                                            <  2:463867/93‑1 (MQ=255)

                             tCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGa                                                            >  1:4694626/1‑93 (MQ=255)

                             tCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGa                                                            <  2:1562239/93‑1 (MQ=255)

                              cACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAg                                                           <  1:2553793/93‑1 (MQ=255)

                               aCTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGt                                                          >  1:5853814/1‑93 (MQ=255)

                               aCTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGt                                                          <  2:5689567/93‑1 (MQ=255)

                                cTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTc                                                         <  2:4177969/93‑1 (MQ=255)

                                cTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTc                                                         <  1:365866/93‑1 (MQ=255)

                                    aCCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCacac                                                     <  1:6034623/93‑1 (MQ=255)

                                        gagCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTa                                                 <  1:2471952/93‑1 (MQ=255)

                                          gCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTAtt                                               >  2:3703076/1‑93 (MQ=255)

                                            aTCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTgc                                             <  2:3966051/93‑1 (MQ=255)

                                             tCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTgcg                                            >  1:2964205/1‑93 (MQ=255)

                                             tCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTgcg                                            >  2:80713/1‑93 (MQ=255)

                                              cgcgATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGGCACACCGTATTgcgc                                           >  1:3953911/1‑93 (MQ=255)

                                               gcgATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGcc                                          >  2:502186/1‑93 (MQ=255)

                                               gcgATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGcc                                          >  2:4295981/1‑93 (MQ=255)

                                                cgATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCa                                         <  1:1040816/93‑1 (MQ=255)

                                                cgATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCa                                         >  1:4472329/1‑93 (MQ=255)

                                                 gATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAg                                        >  2:3120435/1‑93 (MQ=255)

                                                 gATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAg                                        >  1:4582941/1‑93 (MQ=255)

                                                   tACGTTCAGGCTGCTCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTa                                      <  1:3602862/93‑1 (MQ=255)

                                                   tACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTa                                      >  2:4219842/1‑93 (MQ=255)

                                                      ggtCAGGCTGCTCGCGCTGCTGGTTGGCCGGAATAGCGCCCGGCAGCGCATGGCCGGGTTCGGCATGAGCCCCACCGTATGGCGCCAGTAATg                                   <  2:5291650/91‑1 (MQ=255)

                                                      gTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATg                                   <  2:3550029/93‑1 (MQ=255)

                                                      gTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATg                                   <  1:3504505/93‑1 (MQ=255)

                                                       ttCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCTGACCGTATTGAGCCAGTAATga                                  >  2:5004310/1‑92 (MQ=255)

                                                       ttCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATgg                                  <  2:1028641/93‑1 (MQ=255)

                                                       ttCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATgg                                  >  2:3267407/1‑93 (MQ=255)

                                                        tCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGc                                 <  1:1413534/93‑1 (MQ=255)

                                                         cAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCa                                <  1:4119784/93‑1 (MQ=255)

                                                         cAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCa                                <  2:1286331/93‑1 (MQ=255)

                                                          aGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAg                               >  1:1238731/1‑93 (MQ=255)

                                                          aGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAg                               >  2:5095441/1‑93 (MQ=255)

                                                          aGGCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAg                               <  2:2741368/93‑1 (MQ=255)

                                                           ggCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGc                              >  1:5030063/1‑93 (MQ=255)

                                                           ggCTGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGc                              <  2:6087401/93‑1 (MQ=255)

                                                              tGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGaa                           <  1:1578768/93‑1 (MQ=255)

                                                              tGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGaa                           >  1:4481396/1‑93 (MQ=255)

                                                              tGATCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGaa                           >  2:1710965/1‑93 (MQ=255)

                                                                aTCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAgg                         >  2:2205615/1‑92 (MQ=255)

                                                                aTCGCCCTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGt                         <  1:3323163/93‑1 (MQ=255)

                                                                aTCGCCCTGCTGGTCTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGt                         <  1:5181953/93‑1 (MQ=255)

                                                                    cccTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAg                     >  1:1860857/1‑93 (MQ=255)

                                                                     ccTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGc                    >  1:2208570/1‑93 (MQ=255)

                                                                     ccTGCTGGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGc                    <  2:2153903/93‑1 (MQ=255)

                                                                      ctgctgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCt                   >  1:3870123/1‑93 (MQ=255)

                                                                       tgctgGTTTGCCGGAATGGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTCATGGCAGCGAAGCGCCGCTg                  >  1:5478866/1‑93 (MQ=255)

                                                                       tgctgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTg                  <  2:1168201/93‑1 (MQ=255)

                                                                       tgctgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTg                  >  1:5826724/1‑93 (MQ=255)

                                                                       tgctgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTg                  >  1:1744747/1‑93 (MQ=255)

                                                                       tgctgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGGATTGCGCCAGTAATGGCAGCGAAGTGCAGCTg                  >  1:3404195/1‑93 (MQ=255)

                                                                        gctgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGTGAAGTGCAGCTgg                 >  1:710349/1‑93 (MQ=255)

                                                                        gctgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTgg                 <  2:199927/93‑1 (MQ=255)

                                                                         ctgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGt                <  2:3626782/93‑1 (MQ=255)

                                                                          tgGTTTGCTGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTc               <  1:1104841/93‑1 (MQ=255)

                                                                          tgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTc               <  1:3181673/93‑1 (MQ=255)

                                                                          tgGTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTc               <  2:2577220/93‑1 (MQ=255)

                                                                           ggTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCCGTAATGGCAGCGATGGGCCGCTGGTCg              >  1:4965859/1‑93 (MQ=255)

                                                                           ggTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCg              >  1:10822/1‑93 (MQ=255)

                                                                            gTTTGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGc             >  2:1807236/1‑93 (MQ=255)

                                                                             tttGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCt            <  2:2960592/93‑1 (MQ=255)

                                                                               tGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGa          <  1:5896468/93‑1 (MQ=255)

                                                                               tGCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGa          <  1:794981/93‑1 (MQ=255)

                                                                                gCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGaa         >  1:2894240/1‑93 (MQ=255)

                                                                                gCCGGAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGaa         <  1:233492/93‑1 (MQ=255)

                                                                                   ggAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGAAGgc      >  2:3342444/1‑93 (MQ=255)

                                                                                    gAATAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGAAGgcg     >  2:1236199/1‑93 (MQ=255)

                                                                                       tAGCGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGAAGGCGCGt  <  2:3905852/93‑1 (MQ=255)

AGCTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGTGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATGGCAGCGAAGTGCAGCTGGTCGCTGAAGGCGCGT  >  NC_000913/3507741‑3507920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`