BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,525,330	T→C	T408T (ACT→ACC)	yrfF →	putative dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,525,330	0	T	C	100.0%	745.9 / NA	233	T408T (ACT→ACC)	yrfF	putative dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/124); total (109/124)

Only 100 of 239 total aligned reads displayed.

AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT  >  NC_000913/3525240‑3525419

aGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTc                                                                                         <  1:5529870/93‑1 (MQ=255)

aGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTc                                                                                         <  1:3349122/93‑1 (MQ=255)

 gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc                                                                                        >  1:3662962/1‑93 (MQ=255)

 gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc                                                                                        <  1:2999412/93‑1 (MQ=255)

 gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc                                                                                        <  2:6200752/93‑1 (MQ=255)

 gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc                                                                                        <  2:1841845/93‑1 (MQ=255)

  ccaccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCg                                                                                       <  2:3240796/93‑1 (MQ=255)

   caccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCgg                                                                                      >  2:455523/1‑93 (MQ=255)

   caccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCgg                                                                                      >  1:2367658/1‑93 (MQ=255)

   caccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCgg                                                                                      <  1:4125637/93‑1 (MQ=255)

     ccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGaa                                                                                    >  1:722483/1‑93 (MQ=255)

      caGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAc                                                                                   >  2:7806/1‑93 (MQ=255)

        gCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCt                                                                                 >  2:5855635/1‑93 (MQ=255)

        gCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCt                                                                                 >  1:3200917/1‑93 (MQ=255)

         cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg                                                                                <  2:1546612/93‑1 (MQ=255)

         cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg                                                                                <  2:4976332/93‑1 (MQ=255)

         cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg                                                                                >  1:6091621/1‑93 (MQ=255)

         cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg                                                                                >  1:3548348/1‑93 (MQ=255)

          gTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGTGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTgg                                                                               <  1:1041714/93‑1 (MQ=255)

           tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa                                                                              >  2:5264168/1‑93 (MQ=255)

           tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa                                                                              >  1:1264223/1‑93 (MQ=255)

           tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa                                                                              <  1:4210135/93‑1 (MQ=255)

            aaaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAg                                                                             <  2:6249019/93‑1 (MQ=255)

            aaaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAg                                                                             <  1:245669/93‑1 (MQ=255)

                    tGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGCACCTGGAGCGCGaaaa                                                                     >  2:2214939/1‑93 (MQ=255)

                    tGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaaaa                                                                     >  1:3868465/1‑93 (MQ=255)

                    gggCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaaaa                                                                     <  2:157669/92‑1 (MQ=255)

                     ggCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAc                                                                    <  2:5116971/93‑1 (MQ=255)

                      gCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAcc                                                                   <  1:3396822/93‑1 (MQ=255)

                       cTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCa                                                                  >  1:5336611/1‑93 (MQ=255)

                        tGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCaa                                                                 <  1:4756743/93‑1 (MQ=255)

                              tGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCAcc                                                           >  2:1966552/1‑93 (MQ=255)

                               ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt                                                          <  2:5503030/93‑1 (MQ=255)

                               ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt                                                          <  1:5438731/93‑1 (MQ=255)

                                gCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCtt                                                         >  1:156667/1‑93 (MQ=255)

                                 cGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttt                                                        <  2:5714929/93‑1 (MQ=255)

                                   tGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttttt                                                      >  2:1264608/1‑93 (MQ=255)

                                      gggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAc                                                   >  2:463054/1‑93 (MQ=255)

                                       ggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAcc                                                  >  2:480868/1‑93 (MQ=255)

                                       ggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAcc                                                  <  1:6227920/93‑1 (MQ=255)

                                        gTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCg                                                 <  1:4625777/93‑1 (MQ=255)

                                        gTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCg                                                 <  2:2072598/93‑1 (MQ=255)

                                         tAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt                                                >  2:556255/1‑93 (MQ=255)

                                         tAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt                                                >  2:5197896/1‑93 (MQ=255)

                                         tAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt                                                <  2:470873/93‑1 (MQ=255)

                                          aGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGtt                                               >  1:5802803/1‑93 (MQ=255)

                                           ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCATCTTTTTTACCGttt                                              >  2:5471983/1‑93 (MQ=255)

                                           ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGttt                                              <  1:929082/93‑1 (MQ=255)

                                           ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGttt                                              <  1:5642405/93‑1 (MQ=255)

                                              gATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAc                                           <  2:3737393/93‑1 (MQ=255)

                                              gATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAc                                           <  1:3655642/93‑1 (MQ=255)

                                               aTACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACt                                          <  2:4230539/93‑1 (MQ=255)

                                                tACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTg                                         <  2:4125289/93‑1 (MQ=255)

                                                tACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTg                                         <  2:5251691/93‑1 (MQ=255)

                                                  cATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCt                                       >  2:1342096/1‑93 (MQ=255)

                                                   aTTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTc                                      >  2:2937670/1‑93 (MQ=255)

                                                    ttGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCg                                     >  2:2156600/1‑93 (MQ=255)

                                                       cGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAg                                  >  1:5523753/1‑93 (MQ=255)

                                                        gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCTCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa                                 <  1:4445634/93‑1 (MQ=255)

                                                        gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa                                 >  1:3721159/1‑93 (MQ=255)

                                                        gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa                                 <  1:3595614/93‑1 (MQ=255)

                                                         tATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGat                                <  2:9227/93‑1 (MQ=255)

                                                          aTTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTTCTCGCAGatc                               <  2:3857322/93‑1 (MQ=255)

                                                           ttAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatca                              >  2:5599988/1‑93 (MQ=255)

                                                            tAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatcat                             <  1:5249424/93‑1 (MQ=255)

                                                              gCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCt                           <  2:3603660/93‑1 (MQ=255)

                                                               cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg                          <  2:2496167/93‑1 (MQ=255)

                                                               cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg                          <  2:2367658/93‑1 (MQ=255)

                                                               cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg                          <  1:2712504/93‑1 (MQ=255)

                                                                ggTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTgg                         >  1:3521063/1‑93 (MQ=255)

                                                                  tccGGGAATGTGTAATATTCGAACCTCCGGAACCTGGATCGCGAAAACCAATTCACCTTTTTTACCGTTAGACTGCTCGCAGATCATCTGGaa                       <  2:2318994/91‑1 (MQ=255)

                                                                  tACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGaa                       <  1:4961993/93‑1 (MQ=255)

                                                                   aCGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAac                      <  1:1865494/93‑1 (MQ=255)

                                                                    cGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacg                     >  1:5904918/1‑93 (MQ=255)

                                                                     gggAATGTGTAATATTAGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacga                    <  1:2809347/93‑1 (MQ=255)

                                                                       gAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacgacg                  <  2:1749109/93‑1 (MQ=255)

                                                                        aaTGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGc                 >  2:5067152/1‑93 (MQ=255)

                                                                          tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc               >  2:5938747/1‑93 (MQ=255)

                                                                          tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc               >  1:4465763/1‑93 (MQ=255)

                                                                           gtgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCg              >  1:1770916/1‑93 (MQ=255)

                                                                            tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGTACGACGCCCgt             >  2:3288494/1‑92 (MQ=255)

                                                                            tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGc             >  2:2709930/1‑93 (MQ=255)

                                                                            tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGc             <  1:5071389/93‑1 (MQ=255)

                                                                             gtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCt            >  2:5012801/1‑93 (MQ=255)

                                                                             gtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCt            >  1:673446/1‑93 (MQ=255)

                                                                               aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa          >  1:3970235/1‑93 (MQ=255)

                                                                               aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa          <  1:4698916/93‑1 (MQ=255)

                                                                               aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa          >  2:6272055/1‑93 (MQ=255)

                                                                               aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa          <  2:4290469/93‑1 (MQ=255)

                                                                                atatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAt         <  1:4312936/93‑1 (MQ=255)

                                                                                atatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAt         <  2:61141/93‑1 (MQ=255)

                                                                                 tatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAtt        >  1:4889244/1‑93 (MQ=255)

                                                                                 tatTCGAACCTCCGGAACCTGGAGCGCAAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAtt        <  1:1373290/93‑1 (MQ=255)

                                                                                  atTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTg       <  1:1205425/93‑1 (MQ=255)

                                                                                  atTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTg       <  2:806593/93‑1 (MQ=255)

                                                                                  atTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTg       >  2:4397189/1‑93 (MQ=255)

                                                                                     cGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCa    >  2:5771353/1‑93 (MQ=255)

                                                                                      gAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAt   >  1:2957758/1‑93 (MQ=255)

                                                                                       aaCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAtt  >  1:1895678/1‑93 (MQ=255)

                                                                                       aaCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAtt  <  1:2586813/93‑1 (MQ=255)

AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT  >  NC_000913/3525240‑3525419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`