BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	394,962	A→G	S184P (TCT→CCT)	yaiH ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	394,962	0	A	G	99.6%	741.5 / NA	232	S184P (TCT→CCT)	yaiH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (119/112); total (119/113)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 244 total aligned reads displayed.

GACGGGTAATCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGAGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACAAACACCG  >  NC_000913/394872‑395051

gACGGGTAATCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGt                                                                                         >  2:4552591/1‑93 (MQ=255)

gACGGGTAATCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGt                                                                                         <  1:4473359/93‑1 (MQ=255)

   gggTAATCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTAcg                                                                                      >  1:5096413/1‑93 (MQ=255)

     gTAATCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTAcgcc                                                                                    <  2:1177317/93‑1 (MQ=255)

     gTAATCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGAAcgcc                                                                                    <  2:4103520/93‑1 (MQ=255)

      tAATCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTAcgccg                                                                                   >  1:1609457/1‑93 (MQ=255)

        aTCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACgccgcc                                                                                 >  1:5330378/1‑93 (MQ=255)

        aTCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACgccgcc                                                                                 <  1:4120397/93‑1 (MQ=255)

         tCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCt                                                                                >  1:4248767/1‑93 (MQ=255)

          cTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTg                                                                               >  1:1755411/1‑93 (MQ=255)

           tGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGa                                                                              >  2:4944191/1‑93 (MQ=255)

           tGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGa                                                                              <  2:1667431/93‑1 (MQ=255)

           tGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGa                                                                              >  2:2205007/1‑93 (MQ=255)

            gCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGAc                                                                             >  1:833852/1‑93 (MQ=255)

             gtctTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACt                                                                            <  2:4141936/92‑1 (MQ=255)

             ctctTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACt                                                                            <  1:5546827/93‑1 (MQ=255)

             ctctTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACt                                                                            >  2:3933704/1‑93 (MQ=255)

              tctTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTg                                                                           >  2:4500328/1‑93 (MQ=255)

              tctTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTg                                                                           >  2:4692945/1‑93 (MQ=255)

               ctTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGc                                                                          >  1:6124570/1‑93 (MQ=255)

               ctTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGGTAGGGTACGCCGCCTGACTGc                                                                          >  2:5500971/1‑93 (MQ=255)

                  cAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTg                                                                       <  2:1905823/93‑1 (MQ=255)

                  cAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTg                                                                       <  1:2303629/93‑1 (MQ=255)

                       aacTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGcgcg                                                                  <  1:5203841/93‑1 (MQ=255)

                       aacTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGcgcg                                                                  >  1:1039518/1‑93 (MQ=255)

                       aacTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGcgcg                                                                  >  2:5353693/1‑93 (MQ=255)

                        acTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCgg                                                                 >  2:6266615/1‑93 (MQ=255)

                        acTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCgg                                                                 >  2:2176437/1‑93 (MQ=255)

                        acTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCgg                                                                 >  2:3273530/1‑93 (MQ=255)

                          tGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCt                                                               <  2:3425269/93‑1 (MQ=255)

                          tGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCt                                                               >  1:674550/1‑93 (MQ=255)

                            ggTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCttt                                                             <  2:5398853/93‑1 (MQ=255)

                            ggTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCttt                                                             >  2:1836033/1‑93 (MQ=255)

                             gTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTc                                                            <  1:931642/93‑1 (MQ=255)

                             gTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTAGCGCGGCTTTc                                                            <  1:1080898/93‑1 (MQ=255)

                             gTATAAGGCTTGCCGGACGCAGTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTc                                                            <  2:3243781/93‑1 (MQ=255)

                               ataAGGCTTCCCGGACGCATTCGCGAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAg                                                          >  1:493214/1‑93 (MQ=255)

                                taAGGCTTGCCGGACGCATTCGCCAGGGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCGTTGAGc                                                         >  2:4642889/1‑93 (MQ=255)

                                   ggCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTc                                                      <  1:2188125/93‑1 (MQ=255)

                                   ggCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTc                                                      >  2:2729000/1‑93 (MQ=255)

                                   ggCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTc                                                      >  2:1084785/1‑93 (MQ=255)

                                    gCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCg                                                     >  1:3776252/1‑93 (MQ=255)

                                      ttGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGcc                                                   <  1:982922/93‑1 (MQ=255)

                                      ttGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGcc                                                   >  2:2323860/1‑93 (MQ=255)

                                      ttGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGcc                                                   <  2:2479265/93‑1 (MQ=255)

                                        gCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGt                                                 <  1:972966/93‑1 (MQ=255)

                                        gCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGt                                                 >  2:5626178/1‑93 (MQ=255)

                                         ccGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTa                                                <  2:4403977/93‑1 (MQ=255)

                                         ccGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTa                                                >  1:334644/1‑93 (MQ=255)

                                           ggACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGGTTCGCCGTAGa                                              >  1:2675875/1‑93 (MQ=255)

                                            gACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGaa                                             <  2:2975881/93‑1 (MQ=255)

                                            gACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGaa                                             >  1:2270941/1‑93 (MQ=255)

                                            gACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGaa                                             >  2:3771806/1‑93 (MQ=255)

                                            gACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGACTCGCCGTAGaa                                             >  2:6218524/1‑93 (MQ=255)

                                             aCGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGaaa                                            >  1:5466657/1‑93 (MQ=255)

                                             aCGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGaaa                                            <  2:2687161/93‑1 (MQ=255)

                                             aCGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGaaa                                            >  1:3058856/1‑93 (MQ=255)

                                             aCGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGaaa                                            <  1:1153998/93‑1 (MQ=255)

                                             aCGCATACGCCAGTCCATCTGCCAGCAGCTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGaaa                                            <  1:2488443/93‑1 (MQ=255)

                                               gCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAgg                                          <  2:1303279/93‑1 (MQ=255)

                                               gCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAgg                                          <  2:5638201/93‑1 (MQ=255)

                                                 aTTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTa                                        >  2:2860545/1‑93 (MQ=255)

                                                 aTTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTa                                        >  1:6054930/1‑93 (MQ=255)

                                                  ttCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTAt                                       >  2:2960128/1‑93 (MQ=255)

                                                   tCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTAtt                                      <  1:2744747/93‑1 (MQ=255)

                                                   tCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTAtt                                      <  1:3038207/93‑1 (MQ=255)

                                                    cGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTAttt                                     <  2:5115065/93‑1 (MQ=255)

                                                    cGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTAttt                                     <  2:311015/93‑1 (MQ=255)

                                                      ccAGTGCATGTGCCAGCAGGTCGAACGCATGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTcc                                   <  2:5225073/93‑1 (MQ=255)

                                                      ccAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTcc                                   >  2:3562520/1‑93 (MQ=255)

                                                      ccAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTcc                                   >  1:3413259/1‑93 (MQ=255)

                                                      ccAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTcc                                   >  1:3624424/1‑93 (MQ=255)

                                                       cAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCa                                  >  1:1506173/1‑93 (MQ=255)

                                                         gTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGc                                <  2:5277304/93‑1 (MQ=255)

                                                         gTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGc                                <  2:72406/93‑1 (MQ=255)

                                                          tGCATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCg                               >  1:4261690/1‑93 (MQ=255)

                                                            cATCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGtt                             <  2:5443509/93‑1 (MQ=255)

                                                             aTCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTAGCCGTAGAAAGGTATTTCCAGCGTTg                            >  1:3504821/1‑93 (MQ=255)

                                                              tCTGCCAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGc                           >  2:5931497/1‑93 (MQ=255)

                                                                tGCCAGCAGGTCGAACGCAAGGTTAGGGTCCGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTc                         <  1:1716477/93‑1 (MQ=255)

                                                                  ccAGCAGGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTcgc                       <  2:3985716/93‑1 (MQ=255)

                                                                   cagcagGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCTCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTcgcg                      <  1:5281304/93‑1 (MQ=255)

                                                                    agcagGTCGAACTCAAGGTGAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTcgcgc                     <  2:1475223/93‑1 (MQ=255)

                                                                    agcagGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTcgcgc                     >  1:6082079/1‑93 (MQ=255)

                                                                      cagGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGt                   <  1:4384448/93‑1 (MQ=255)

                                                                       agGTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGtt                  <  1:2415763/93‑1 (MQ=255)

                                                                        ggTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTg                 >  2:4832347/1‑93 (MQ=255)

                                                                        ggTCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTg                 <  2:6058433/93‑1 (MQ=255)

                                                                          tCGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGc               >  2:5470060/1‑93 (MQ=255)

                                                                           cGAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGcc              <  1:2091401/93‑1 (MQ=255)

                                                                            gAACGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCa             <  2:5096413/93‑1 (MQ=255)

                                                                             aaCGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAg            >  2:5669267/1‑93 (MQ=255)

                                                                               cGCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGAc          <  2:3807826/93‑1 (MQ=255)

                                                                                gCAAGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACa         >  1:4717184/1‑93 (MQ=255)

                                                                                   aGGTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACAAac      <  2:2047844/93‑1 (MQ=255)

                                                                                    ggTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACAAaca     >  2:903073/1‑93 (MQ=255)

                                                                                     gTTAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACAAacac    <  2:124760/93‑1 (MQ=255)

                                                                                      ttAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACAAaaacg   >  1:3986869/1‑92 (MQ=255)

                                                                                      ttAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACAAACAcc   <  1:2009060/93‑1 (MQ=255)

                                                                                       tAGGGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACAAACACCg  <  1:6147759/93‑1 (MQ=255)

GACGGGTAATCTGCTCTTCAAACAACTGGGTATAAGGCTTGCCGGACGCATTCGCCAGTGCATCTGCCAGCAGGTCGAACGCAAGGTTAGAGTACGCCGCCTGACTGCCTGGCGCGGCTTTCAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGCTCGCGCGTTGGCCAGACAAACACCG  >  NC_000913/394872‑395051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`