BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	405,539	A→G	intergenic (+93/‑90)	yaiI → / → aroL	hypothetical protein/shikimate kinase II

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	405,539	0	A	G	100.0%	716.9 / NA	218	intergenic (+93/‑90)	yaiI/aroL	hypothetical protein/shikimate kinase II
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (139/79); total (139/79)

Only 100 of 220 total aligned reads displayed.

GTAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTACAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACG  >  NC_000913/405449‑405628

gTAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCa                                                                                         >  1:3466104/1‑93 (MQ=255)

 tAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCaa                                                                                        >  2:2101353/1‑93 (MQ=255)

 tAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCaa                                                                                        >  1:646411/1‑93 (MQ=255)

 tAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCaa                                                                                        >  2:1241255/1‑93 (MQ=255)

 tAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCaa                                                                                        <  2:439373/93‑1 (MQ=255)

  aaTTTATTCTTTACACTTCCTTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAAt                                                                                       >  2:6104920/1‑93 (MQ=255)

  aaTTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAAt                                                                                       >  1:5425121/1‑93 (MQ=255)

  aaTTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAAt                                                                                       >  1:2738964/1‑93 (MQ=255)

   aTTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATc                                                                                      <  2:3463162/93‑1 (MQ=255)

    tttATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCg                                                                                     >  1:1874726/1‑93 (MQ=255)

    tttATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCg                                                                                     >  1:4481851/1‑93 (MQ=255)

      tattatTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGaa                                                                                   >  2:3142855/1‑93 (MQ=255)

      tattatTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGaa                                                                                   <  1:5286097/93‑1 (MQ=255)

        ttattTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAAt                                                                                 <  1:2329487/93‑1 (MQ=255)

         tattTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAAtt                                                                                >  2:3994819/1‑93 (MQ=255)

           tttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGt                                                                              >  2:4067172/1‑93 (MQ=255)

            ttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTa                                                                             >  1:894310/1‑93 (MQ=255)

            ttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTa                                                                             >  2:1090913/1‑93 (MQ=255)

              acacTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACt                                                                           <  1:4839430/93‑1 (MQ=255)

               cacTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTa                                                                          <  2:686030/93‑1 (MQ=255)

                   tCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGttt                                                                      >  2:2398479/1‑93 (MQ=255)

                       tCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATg                                                                  <  2:576972/93‑1 (MQ=255)

                       tCTTGAATATTTATTAGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATg                                                                  <  2:2793133/93‑1 (MQ=255)

                        cTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATgg                                                                 <  1:1142129/93‑1 (MQ=255)

                         ttGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGt                                                                >  2:2500694/1‑93 (MQ=255)

                          tGAATATTTATTGGTATAGTAAGTGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCAAAATTGTACTAGTTTGATGGTa                                                               <  1:4963659/93‑1 (MQ=255)

                          tGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTa                                                               >  1:704691/1‑93 (MQ=255)

                          tGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTa                                                               >  2:1546628/1‑93 (MQ=255)

                          tGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTa                                                               >  1:2114317/1‑93 (MQ=255)

                          tGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTa                                                               <  2:3299879/93‑1 (MQ=255)

                           gAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTAt                                                              >  1:316686/1‑93 (MQ=255)

                             atatTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGa                                                            >  2:4527173/1‑93 (MQ=255)

                                tttattGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCg                                                         >  1:1004116/1‑93 (MQ=255)

                                tttattGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCg                                                         >  1:5350312/1‑93 (MQ=255)

                                 ttattGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGc                                                        <  2:5685436/93‑1 (MQ=255)

                                  tattGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCt                                                       >  1:5383843/1‑93 (MQ=255)

                                  tattGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCt                                                       <  2:3666524/93‑1 (MQ=255)

                                  tattGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCt                                                       >  2:1357386/1‑93 (MQ=255)

                                   attGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTa                                                      <  1:129485/93‑1 (MQ=255)

                                   attGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTa                                                      >  1:2140703/1‑93 (MQ=255)

                                   attGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTa                                                      >  2:2236848/1‑93 (MQ=255)

                                   attGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTa                                                      <  2:1957528/93‑1 (MQ=255)

                                    ttGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTAt                                                     >  1:3112407/1‑93 (MQ=255)

                                      ggTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATtc                                                   <  1:3247902/93‑1 (MQ=255)

                                        tataGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATtctc                                                 >  2:1262273/1‑93 (MQ=255)

                                         ataGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCa                                                >  1:2188352/1‑93 (MQ=255)

                                          taGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCAt                                               <  1:85135/93‑1 (MQ=255)

                                            gTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGa                                             <  2:631089/93‑1 (MQ=255)

                                            gTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGa                                             >  1:253305/1‑93 (MQ=255)

                                            gTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGa                                             >  1:2933903/1‑93 (MQ=255)

                                            gTAAGGGGGGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGa                                             >  1:2966330/1‑93 (MQ=255)

                                               aagtgtgtATTGAGATTTTCACTTTAAGTAGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGacac                                          <  1:2003014/89‑1 (MQ=255)

                                               aGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGacac                                          >  1:6151727/1‑93 (MQ=255)

                                               aGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGacac                                          <  2:509573/93‑1 (MQ=255)

                                               aGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGacac                                          >  2:5062687/1‑93 (MQ=255)

                                               aGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGacac                                          <  2:2028929/93‑1 (MQ=255)

                                                ggggTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACAcc                                         >  1:2875787/1‑93 (MQ=255)

                                                 gggTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCg                                        <  2:1121099/93‑1 (MQ=255)

                                                  ggTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCgg                                       >  1:5975871/1‑93 (MQ=255)

                                                  ggTGTATTGAGATTTTCACTTTAAGTGGAACTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCgg                                       >  2:3117299/1‑93 (MQ=255)

                                                   gtgtATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGc                                      >  1:6082451/1‑93 (MQ=255)

                                                    tgtATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCt                                     <  2:2663200/93‑1 (MQ=255)

                                                     gtATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCtt                                    >  2:1817075/1‑93 (MQ=255)

                                                      tATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCttt                                   >  1:5161921/1‑93 (MQ=255)

                                                      tATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCttt                                   >  1:4570049/1‑93 (MQ=255)

                                                       aTTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTc                                  <  2:5408796/93‑1 (MQ=255)

                                                        ttGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGCAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACTCCGGCTTTcg                                 >  2:2912844/1‑93 (MQ=255)

                                                        ttGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTcg                                 >  1:5612790/1‑93 (MQ=255)

                                                         tGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTcgc                                >  1:1432704/1‑93 (MQ=255)

                                                         tGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTcgc                                <  2:3748689/93‑1 (MQ=255)

                                                          gagaTTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTcgcc                               >  1:3949005/1‑93 (MQ=255)

                                                             aTTTTCACTTTAAGTAGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCa                            <  1:1817503/93‑1 (MQ=255)

                                                              ttttCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCAt                           >  2:4233463/1‑93 (MQ=255)

                                                               tttCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCAtt                          <  1:38573/93‑1 (MQ=255)

                                                                ttCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTg                         >  1:2244114/1‑93 (MQ=255)

                                                                 tCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGc                        <  2:2322902/93‑1 (MQ=255)

                                                                    cTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGAc                     <  1:5788846/93‑1 (MQ=255)

                                                                    cTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGAc                     <  2:2752528/93‑1 (MQ=255)

                                                                      ttAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCt                   >  2:4310213/1‑93 (MQ=255)

                                                                       tAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTa                  >  2:3802419/1‑93 (MQ=255)

                                                                       tAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTa                  <  1:2651011/93‑1 (MQ=255)

                                                                         aGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTAtt                <  2:5536546/93‑1 (MQ=255)

                                                                         aGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTAtt                >  2:2884977/1‑93 (MQ=255)

                                                                         aGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTAtt                >  2:476545/1‑93 (MQ=255)

                                                                          gTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTg               >  2:1074805/1‑93 (MQ=255)

                                                                          gTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTg               <  1:204457/93‑1 (MQ=255)

                                                                            ggAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTggg             <  1:1344264/93‑1 (MQ=255)

                                                                              aaTTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGa           >  1:2493540/1‑93 (MQ=255)

                                                                                 tttttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGaaaa        <  2:5279018/93‑1 (MQ=255)

                                                                                  ttttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAc       >  2:4631744/1‑93 (MQ=255)

                                                                                  ttttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAc       >  2:3473858/1‑93 (MQ=255)

                                                                                  ttttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAc       <  2:743107/93‑1 (MQ=255)

                                                                                   tttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAcc      >  2:5181094/1‑93 (MQ=255)

                                                                                   tttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAcc      >  1:3521323/1‑93 (MQ=255)

                                                                                    ttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAccc     <  1:169842/93‑1 (MQ=255)

                                                                                    ttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAccc     <  2:5960253/93‑1 (MQ=255)

                                                                                     tCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCa    <  2:1780216/93‑1 (MQ=255)

                                                                                      cTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCAc   >  2:4887202/1‑93 (MQ=255)

                                                                                       tttGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACg  >  1:2995731/1‑93 (MQ=255)

                                                                                       tttGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACg  >  1:427139/1‑93 (MQ=255)

GTAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTACAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACG  >  NC_000913/405449‑405628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`