BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,648,042	T→C	L59P (CTG→CCG)	arsC →	arsenate reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,648,042	0	T	C	100.0%	816.4 / NA	255	L59P (CTG→CCG)	arsC	arsenate reductase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (113/142); total (113/142)

Only 100 of 272 total aligned reads displayed.

CGACTATTATCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCTGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCTTCAGCACC  >  NC_000913/3647952‑3648131

   cTATTATCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTAAGCGCGCTGCCGCGTa                                                                                      >  2:5074812/1‑93 (MQ=255)

      ttatCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTaaaa                                                                                   <  1:2745349/93‑1 (MQ=255)

       tatCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTA‑‑CGCGCTGCCGCGTAAAAACg                                                                                >  2:125698/1‑93 (MQ=255)

        atCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAAc                                                                                 <  2:2817345/93‑1 (MQ=255)

         tCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACg                                                                                <  2:659159/93‑1 (MQ=255)

         tCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACg                                                                                <  2:1536564/93‑1 (MQ=255)

         tCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACg                                                                                <  1:2766005/93‑1 (MQ=255)

         gccATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACg                                                                                <  1:3123272/92‑1 (MQ=255)

             ttATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGa                                                                            >  1:577160/1‑93 (MQ=255)

             ttATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGa                                                                            >  2:5960331/1‑93 (MQ=255)

             ttATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGa                                                                            <  1:4050607/93‑1 (MQ=255)

              tATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGaa                                                                           >  1:581668/1‑93 (MQ=255)

               aTCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAAc                                                                          >  1:2321152/1‑93 (MQ=255)

               aTCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAAc                                                                          <  1:2379566/93‑1 (MQ=255)

                tCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAAcc                                                                         >  1:5305864/1‑93 (MQ=255)

                tCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAAcc                                                                         >  1:2998474/1‑93 (MQ=255)

                 cTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCg                                                                        <  1:927094/93‑1 (MQ=255)

                   ggAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTa                                                                      >  1:851874/1‑93 (MQ=255)

                   ggAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTa                                                                      >  2:1867915/1‑93 (MQ=255)

                    gAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTAt                                                                     <  2:3605747/93‑1 (MQ=255)

                    gAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTAt                                                                     <  1:4897578/93‑1 (MQ=255)

                    gAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTAt                                                                     <  2:1785365/93‑1 (MQ=255)

                       aCTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATgag                                                                  >  2:419237/1‑93 (MQ=255)

                        cTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATgagg                                                                 <  1:3527890/93‑1 (MQ=255)

                        cTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATgagg                                                                 <  1:3723565/93‑1 (MQ=255)

                         tCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATgagga                                                                <  2:2332549/93‑1 (MQ=255)

                            gCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCt                                                             <  2:3671849/93‑1 (MQ=255)

                            cccAACGCGCGATGAACTGGTCAGACTCATTGCCGATATGGGGATTTCCGTACGCGCGCGGCCGCGTAAAAACGTCGAACCGTATGAGGAGCt                                                             <  2:4056880/92‑1 (MQ=255)

                             ccAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTg                                                            <  2:415383/93‑1 (MQ=255)

                               aaCGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTggg                                                          >  2:622883/1‑93 (MQ=255)

                               aaCGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGATGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTggg                                                          >  1:3827033/1‑93 (MQ=255)

                                aCGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGc                                                         >  1:2601056/1‑93 (MQ=255)

                                     cgATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGc                                                    <  1:126579/93‑1 (MQ=255)

                                     cgATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGc                                                    <  1:5281775/93‑1 (MQ=255)

                                      gATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCg                                                   >  2:1597942/1‑93 (MQ=255)

                                      gATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCg                                                   >  2:966348/1‑93 (MQ=255)

                                      gATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCg                                                   <  1:6066413/93‑1 (MQ=255)

                                      gATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCg                                                   >  2:2697824/1‑93 (MQ=255)

                                       aTGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCgg                                                  <  1:1165331/93‑1 (MQ=255)

                                        tGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGa                                                 >  2:2034512/1‑93 (MQ=255)

                                        tGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGa                                                 <  2:223086/93‑1 (MQ=255)

                                         taaCTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCCCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGaa                                                <  1:3378199/92‑1 (MQ=255)

                                         gAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGaa                                                <  1:1624492/93‑1 (MQ=255)

                                         gAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATAAGGAGCTGGGCCTTGCGGaa                                                <  2:5291058/93‑1 (MQ=255)

                                          aaCTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAg                                               <  1:4073332/93‑1 (MQ=255)

                                           aCTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGa                                              <  1:4688629/93‑1 (MQ=255)

                                           aCTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGa                                              <  1:964358/93‑1 (MQ=255)

                                            cTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGAt                                             <  1:1483296/93‑1 (MQ=255)

                                             tGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATa                                            >  1:4930344/1‑93 (MQ=255)

                                                 cAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAAtt                                        >  2:2308374/1‑93 (MQ=255)

                                                 aaaaCTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAAtt                                        <  2:4296010/92‑1 (MQ=255)

                                                   aaCTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTa                                      >  2:5602684/1‑93 (MQ=255)

                                                   aaCTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTa                                      >  1:1734563/1‑93 (MQ=255)

                                                    aCTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTAc                                     >  2:4078555/1‑93 (MQ=255)

                                                     cTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACt                                    <  2:4465923/93‑1 (MQ=255)

                                                     cTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACt                                    <  1:5072603/93‑1 (MQ=255)

                                                      tCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTg                                   >  1:4642540/1‑93 (MQ=255)

                                                      tCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTg                                   >  1:3952383/1‑93 (MQ=255)

                                                       cATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGa                                  >  1:1089251/1‑93 (MQ=255)

                                                       cATTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGa                                  <  2:1956585/93‑1 (MQ=255)

                                                        aTTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGag                                 >  2:1302243/1‑92 (MQ=255)

                                                        aTTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGAc                                 <  1:3778059/93‑1 (MQ=255)

                                                        aTTGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGAc                                 <  1:5874793/93‑1 (MQ=255)

                                                         ttGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACg                                >  2:1510848/1‑93 (MQ=255)

                                                          tGCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGa                               <  2:2897812/93‑1 (MQ=255)

                                                           gCCGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGAt                              >  2:2678387/1‑93 (MQ=255)

                                                             cGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCg                            <  2:5262453/93‑1 (MQ=255)

                                                             cGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCg                            >  1:2042599/1‑93 (MQ=255)

                                                             cGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCg                            >  1:3038980/1‑93 (MQ=255)

                                                             cGATATGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCg                            <  1:5612897/93‑1 (MQ=255)

                                                                 atGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTa                        >  1:1045254/1‑93 (MQ=255)

                                                                 atGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTa                        <  2:5371863/93‑1 (MQ=255)

                                                                  tGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTaa                       >  1:251249/1‑93 (MQ=255)

                                                                  tGGGGATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTaa                       <  1:3480464/93‑1 (MQ=255)

                                                                   ggggATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAAt                      <  1:442637/93‑1 (MQ=255)

                                                                   ggggATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAAt                      <  2:1198633/93‑1 (MQ=255)

                                                                   ggggATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAAt                      <  2:4961242/93‑1 (MQ=255)

                                                                    gggATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATc                     >  2:4026924/1‑93 (MQ=255)

                                                                    gggATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATc                     >  1:2916649/1‑93 (MQ=255)

                                                                    gggATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATc                     <  2:26138/93‑1 (MQ=255)

                                                                    gggATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATc                     <  2:6122320/93‑1 (MQ=255)

                                                                     ggATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCg                    <  1:6244558/93‑1 (MQ=255)

                                                                      gATTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGa                   >  2:3435290/1‑93 (MQ=255)

                                                                       aTTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGAc                  <  1:322641/93‑1 (MQ=255)

                                                                       aTTTCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGAc                  >  2:6256208/1‑93 (MQ=255)

                                                                        tttCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACt                 >  1:4312280/1‑93 (MQ=255)

                                                                         ttCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACtt                <  2:4525854/93‑1 (MQ=255)

                                                                          tCCGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACttt               <  1:5365679/93‑1 (MQ=255)

                                                                           ccGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTa              <  1:5970177/93‑1 (MQ=255)

                                                                           ccGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTa              <  1:5845435/93‑1 (MQ=255)

                                                                            cGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTAt             <  2:3138750/93‑1 (MQ=255)

                                                                            cGTACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTAt             <  1:494846/93‑1 (MQ=255)

                                                                              tACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGc           >  2:2122608/1‑93 (MQ=255)

                                                                              tACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGc           >  1:214515/1‑93 (MQ=255)

                                                                              tACGCGCGCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGc           >  2:3017437/1‑93 (MQ=255)

                                                                                cgcgcgCTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCtt         <  1:691043/93‑1 (MQ=255)

                                                                                 gcgcgcTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCTTc        <  1:2545170/93‑1 (MQ=255)

                                                                                 gcgcgcTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCTTc        <  2:3372811/93‑1 (MQ=255)

                                                                                  cgcgcTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCTTCa       >  2:5883066/1‑93 (MQ=255)

                                                                                  cgcgcTGCCGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCTTCa       <  2:4709699/93‑1 (MQ=255)

CGACTATTATCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCTGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCTTCAGCACC  >  NC_000913/3647952‑3648131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`