BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	408,017	T→C	L42P (CTG→CCG)	b0392 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	408,017	0	T	C	100.0%	734.3 / NA	228	L42P (CTG→CCG)	b0392	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (118/110); total (118/110)

Only 100 of 250 total aligned reads displayed.

CGGCATTGCGCAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCTGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACGTGATT  >  NC_000913/407927‑408106

 ggCATTGCGCAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAgccggc                                                                                        >  2:3353627/1‑93 (MQ=255)

  gCATTGCGCAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAgccggct                                                                                       <  2:2869404/93‑1 (MQ=255)

   cATTGCGCAACGCACATACCCCGGCGTTGGTGTTAACGACATTGACTAAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAgccggctg                                                                                      >  2:1705520/1‑93 (MQ=255)

       gcgcAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGa                                                                                  >  1:1385552/1‑93 (MQ=255)

       gcgcAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGa                                                                                  <  1:755307/93‑1 (MQ=255)

        cgcAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGAt                                                                                 <  1:4399802/93‑1 (MQ=255)

         gcAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGAtg                                                                                >  1:4049314/1‑93 (MQ=255)

         gcAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGAtg                                                                                <  2:4550179/93‑1 (MQ=255)

         gcAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGAtg                                                                                <  2:2140052/93‑1 (MQ=255)

          cAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGAtgt                                                                               >  1:876686/1‑93 (MQ=255)

           aaCGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGAtgtg                                                                              >  1:5120112/1‑93 (MQ=255)

            aCGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGa                                                                             >  2:168615/1‑93 (MQ=255)

             cGCCCATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGaa                                                                            <  2:5319683/93‑1 (MQ=255)

             cGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGaa                                                                            <  1:6008035/93‑1 (MQ=255)

               cacaTACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGaaaa                                                                          <  2:224785/93‑1 (MQ=255)

               cacaTACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGaaaa                                                                          >  1:1119960/1‑93 (MQ=255)

               cacaTACCCCGGCGTTGTTGTTAACGACAGTGCCTGAGCCTCCGGATCCGGCGCTGGCTATTAATAATCCACACCCGGCTGCCGATGTGacaa                                                                          >  2:1199539/1‑93 (MQ=255)

                acaTACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAAc                                                                         >  1:5948343/1‑93 (MQ=255)

                  aTACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACgg                                                                       <  1:5249940/93‑1 (MQ=255)

                     ccccGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGt                                                                    <  1:5589990/93‑1 (MQ=255)

                     ccccGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGt                                                                    <  1:5450222/93‑1 (MQ=255)

                       ccGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTgg                                                                  >  1:308633/1‑93 (MQ=255)

                        cGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGt                                                                 <  2:2188519/93‑1 (MQ=255)

                        cGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGt                                                                 <  1:240767/93‑1 (MQ=255)

                         ggCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGtt                                                                <  1:3476588/93‑1 (MQ=255)

                          gCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTa                                                               >  1:2273002/1‑93 (MQ=255)

                           cGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTaa                                                              >  1:2704150/1‑93 (MQ=255)

                             ttgtttttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTaaaa                                                            <  1:610670/93‑1 (MQ=255)

                             ttgttgttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTaaaa                                                            >  1:4267595/1‑93 (MQ=255)

                             ttgttgttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTaaaa                                                            <  2:310140/93‑1 (MQ=255)

                             ttgttgttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTaaaa                                                            >  2:2794606/1‑93 (MQ=255)

                             gtgttgttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTaaaa                                                            <  1:3940266/92‑1 (MQ=255)

                               gttgttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAaga                                                          <  1:3165731/93‑1 (MQ=255)

                               gttgttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAaga                                                          >  2:616690/1‑93 (MQ=255)

                               gttgttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAaga                                                          >  2:4906768/1‑93 (MQ=255)

                               gttgttAACGACATTGACTGAGCCTCAGGATCGGCCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAaga                                                          <  2:1373379/93‑1 (MQ=255)

                               gttgttAACGAAATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAaga                                                          <  1:379857/93‑1 (MQ=255)

                                ttgttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAagag                                                         <  1:947815/93‑1 (MQ=255)

                                  gttAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGa                                                       <  1:820458/93‑1 (MQ=255)

                                   ttAAAGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGAt                                                      <  1:2043884/93‑1 (MQ=255)

                                    tAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATc                                                     >  1:930205/1‑93 (MQ=255)

                                     aaCGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATcc                                                    >  2:3784207/1‑93 (MQ=255)

                                     aaCGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATcc                                                    >  2:4371068/1‑93 (MQ=255)

                                     aaCGACATTGACTGAGCCTCAGAATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATcc                                                    <  2:4715759/93‑1 (MQ=255)

                                      aCGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCca                                                   >  2:1895232/1‑93 (MQ=255)

                                      aCGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCca                                                   <  1:3230725/93‑1 (MQ=255)

                                       cGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCcat                                                  <  2:5922303/93‑1 (MQ=255)

                                        gACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCcatc                                                 <  1:567461/93‑1 (MQ=255)

                                          cATTAACTGAGCATCAGGATTGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGGGAAAACGGCGTTGTTAAAAGAGGATCcatcat                                               <  2:4165723/93‑1 (MQ=255)

                                           aTTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCAtt                                              <  1:3236426/93‑1 (MQ=255)

                                             tGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTAc                                            <  1:5832545/93‑1 (MQ=255)

                                               aCTGAGCCTCAGGATCGGTCGCTGGCTATTATTAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTActc                                          >  1:2834241/1‑93 (MQ=255)

                                               aCTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTActc                                          <  2:3277692/93‑1 (MQ=255)

                                                 tGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCtt                                        >  2:4634643/1‑93 (MQ=255)

                                                  gaaccTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGGGAAAACGGCGTGGTTAAAAGAGGAACCATCATTACTCTTa                                       >  2:5095266/4‑93 (MQ=255)

                                                  gAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTa                                       >  1:1008485/1‑93 (MQ=255)

                                                  gAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTa                                       <  2:4987583/93‑1 (MQ=255)

                                                   aGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTAt                                      <  1:3342410/93‑1 (MQ=255)

                                                    gCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTAtt                                     <  2:2362191/93‑1 (MQ=255)

                                                    gCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTAtt                                     >  2:1996773/1‑93 (MQ=255)

                                                      cTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTg                                   <  1:2876845/93‑1 (MQ=255)

                                                       tCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGt                                  >  2:4130848/1‑93 (MQ=255)

                                                       tCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGt                                  <  2:5820734/93‑1 (MQ=255)

                                                       tCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGt                                  <  1:4568397/93‑1 (MQ=255)

                                                       tCAGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGt                                  >  1:4298141/1‑93 (MQ=255)

                                                         aGGATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCg                                >  2:13148/1‑93 (MQ=255)

                                                          ggATCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGa                               >  1:2140965/1‑93 (MQ=255)

                                                          ggATCGGTCGCTGGCTATTAATAATCCACAGCCCGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGa                               >  2:5381091/1‑93 (MQ=255)

                                                             tCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGaaca                            <  1:5773118/93‑1 (MQ=255)

                                                             tCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGaaca                            <  2:2520263/93‑1 (MQ=255)

                                                             tCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGaaca                            <  1:2928386/93‑1 (MQ=255)

                                                             tCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGaaca                            <  2:6283934/93‑1 (MQ=255)

                                                             tCGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATACATCATTACTCTTATTTGTCGaaca                            >  2:3120627/1‑93 (MQ=255)

                                                              cGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGaacaa                           <  2:5764429/93‑1 (MQ=255)

                                                              cGGTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGaacaa                           >  1:2203830/1‑93 (MQ=255)

                                                               ggTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGaacaac                          >  1:3685152/1‑93 (MQ=255)

                                                                gTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAAcc                         <  2:3854170/93‑1 (MQ=255)

                                                                gTCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAAcc                         <  2:449938/93‑1 (MQ=255)

                                                                 tCGCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAAccc                        >  2:3450663/1‑93 (MQ=255)

                                                                  cGCTGGCTATTAATAATCCACAGCCTGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCg                       <  2:733817/93‑1 (MQ=255)

                                                                   gCTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGa                      <  1:5058693/93‑1 (MQ=255)

                                                                    cTGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGAt                     >  2:3955806/1‑93 (MQ=255)

                                                                     tGGCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATc                    <  2:3680146/93‑1 (MQ=255)

                                                                      ggCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCt                   >  2:354246/1‑93 (MQ=255)

                                                                      ggCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCt                   <  2:6209064/93‑1 (MQ=255)

                                                                      ggCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCt                   >  1:5465526/1‑93 (MQ=255)

                                                                      ggCTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCt                   >  1:2543612/1‑93 (MQ=255)

                                                                      ggCTATTAATAAACCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCt                   >  1:6257738/1‑93 (MQ=255)

                                                                        cTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCttt                 <  1:1659304/93‑1 (MQ=255)

                                                                        cTATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCttt                 >  2:5448823/1‑93 (MQ=255)

                                                                         tATTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTc                <  2:2273002/93‑1 (MQ=255)

                                                                          aTTAATAATCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTcc               >  2:1161541/1‑92 (MQ=255)

                                                                               taatCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGtt          >  2:5265429/1‑93 (MQ=255)

                                                                                 atCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTAc        >  1:1471096/1‑93 (MQ=255)

                                                                                 atCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTAc        <  1:274116/93‑1 (MQ=255)

                                                                                  tCCACAGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACg       <  1:6125559/93‑1 (MQ=255)

                                                                                    cacaGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACGTg     >  1:4981849/1‑93 (MQ=255)

                                                                                     acaGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACGTGa    >  2:4592963/1‑93 (MQ=255)

                                                                                       aGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACGTGAtt  >  2:5679665/1‑93 (MQ=255)

                                                                                       aGCCGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACGTGAtt  >  2:4770822/1‑93 (MQ=255)

CGGCATTGCGCAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCTGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACGTGATT  >  NC_000913/407927‑408106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`