BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,683,433	T→C	Y1107C (TAC→TGC)	b3530 ←	putative oxidoreductase subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,683,433	0	T	C	100.0%	626.4 / NA	195	Y1107C (TAC→TGC)	b3530	putative oxidoreductase subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/104); total (91/104)

Only 100 of 211 total aligned reads displayed.

TAAGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAGCCG  >  NC_000913/3683343‑3683522

 aaGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAAt                                                                                        <  2:2418006/93‑1 (MQ=255)

 aaGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAAt                                                                                        >  2:1952794/1‑93 (MQ=255)

  aGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATc                                                                                       >  1:3876914/1‑93 (MQ=255)

  aGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATc                                                                                       <  1:3028980/93‑1 (MQ=255)

     tATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCttt                                                                                    <  2:2393955/93‑1 (MQ=255)

     tATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCttt                                                                                    >  2:2093657/1‑93 (MQ=255)

      aTCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATCACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATGTTTc                                                                                   >  2:308424/1‑93 (MQ=255)

      aTCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTc                                                                                   <  1:5093973/93‑1 (MQ=255)

      aTCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTc                                                                                   <  2:24444/93‑1 (MQ=255)

      aTCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTc                                                                                   >  1:2315939/1‑93 (MQ=255)

       tCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCg                                                                                  >  2:1558817/1‑93 (MQ=255)

       tCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCg                                                                                  <  1:5077382/93‑1 (MQ=255)

          gCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCct                                                                               >  2:4335453/1‑93 (MQ=255)

          gCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCct                                                                               <  1:464213/93‑1 (MQ=255)

            ggCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGGGCAATCTTTCGCctgc                                                                             >  2:436438/1‑93 (MQ=255)

            ggCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgc                                                                             <  1:5709582/93‑1 (MQ=255)

            ggCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgc                                                                             <  2:5112332/93‑1 (MQ=255)

            ggCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgc                                                                             <  1:1317354/93‑1 (MQ=255)

             gCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgct                                                                            >  1:5389525/1‑93 (MQ=255)

               tGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTgg                                                                          <  1:4115356/93‑1 (MQ=255)

               tGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGGGCGCAATCTTTCGCCTGCTgg                                                                          >  2:2527090/1‑93 (MQ=255)

                 cggcggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGat                                                                        <  1:5377038/93‑1 (MQ=255)

                 cggcggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGat                                                                        <  2:2202097/93‑1 (MQ=255)

                  ggcggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGata                                                                       >  1:2113939/1‑93 (MQ=255)

                    cggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATc                                                                     <  1:4768196/93‑1 (MQ=255)

                    cggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATc                                                                     >  1:1427381/1‑93 (MQ=255)

                     ggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATCACGTACGTAGAGCAGGAAATGGCTGGGTGGGCAATCTTTCTCCTGCTGGTTATCa                                                                    >  1:3365126/1‑93 (MQ=255)

                     ggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCa                                                                    >  1:856505/1‑93 (MQ=255)

                      gTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCaa                                                                   <  2:4963791/93‑1 (MQ=255)

                      gTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCaa                                                                   >  2:2297431/1‑93 (MQ=255)

                      gTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCaa                                                                   <  2:368681/93‑1 (MQ=255)

                      gTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCaa                                                                   <  1:5884797/93‑1 (MQ=255)

                      gTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCaa                                                                   >  1:2384568/1‑93 (MQ=255)

                       tAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAAt                                                                  <  2:5839454/93‑1 (MQ=255)

                        aaaTCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAAtt                                                                 <  2:4855951/93‑1 (MQ=255)

                            ccATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCg                                                             >  1:3589372/1‑93 (MQ=255)

                            ccATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCg                                                             >  1:2429562/1‑93 (MQ=255)

                            ccATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTAGCCTGCTGGATATCAATTGCCg                                                             >  1:737426/1‑93 (MQ=255)

                               tGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGc                                                          >  1:2846259/1‑93 (MQ=255)

                               tGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGc                                                          >  2:6257484/1‑93 (MQ=255)

                                gTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGcc                                                         <  1:2249680/93‑1 (MQ=255)

                                 tCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCca                                                        >  1:2998828/1‑93 (MQ=255)

                                    cccTGCCATCCGGCGGCAGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCcaaca                                                     >  1:2081723/1‑93 (MQ=255)

                                      cTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACaaa                                                   <  1:317210/93‑1 (MQ=255)

                                        gCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAAcc                                                 >  1:2720180/1‑93 (MQ=255)

                                        gCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAAcc                                                 <  1:5496009/93‑1 (MQ=255)

                                        gCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAAcc                                                 >  2:1027755/1‑93 (MQ=255)

                                         ccATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCa                                                <  2:5942683/93‑1 (MQ=255)

                                         ccATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCa                                                <  2:4722446/93‑1 (MQ=255)

                                          cATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGGCAACAAACCAg                                               >  2:2329206/1‑93 (MQ=255)

                                          cATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAg                                               <  1:1096650/93‑1 (MQ=255)

                                            tCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGtt                                             <  2:5633242/93‑1 (MQ=255)

                                            tCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGtt                                             <  2:2044801/93‑1 (MQ=255)

                                               ggcggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGa                                          >  2:4816863/1‑93 (MQ=255)

                                                gcggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGaa                                         <  2:5171814/93‑1 (MQ=255)

                                                 gggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAg                                        <  2:4480747/92‑1 (MQ=255)

                                                 cggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAg                                        >  2:5784983/1‑93 (MQ=255)

                                                  ggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGt                                       <  1:711716/93‑1 (MQ=255)

                                                   gcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTa                                      >  2:5324949/1‑93 (MQ=255)

                                                   gcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTa                                      >  2:6097655/1‑93 (MQ=255)

                                                   gcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTa                                      >  2:3393552/1‑93 (MQ=255)

                                                    cggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTaa                                     <  1:2013119/93‑1 (MQ=255)

                                                     ggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTaaa                                    >  2:1225340/1‑92 (MQ=255)

                                                     ggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAac                                    <  2:1860850/93‑1 (MQ=255)

                                                     ggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAac                                    >  1:5461292/1‑93 (MQ=255)

                                                      gAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAaca                                   >  2:647802/1‑93 (MQ=255)

                                                       aaTAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAacac                                  >  1:5813117/1‑93 (MQ=255)

                                                       aaTAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAacac                                  >  1:334224/1‑93 (MQ=255)

                                                        aTAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACAcg                                 >  2:1744497/1‑93 (MQ=255)

                                                         tAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACAcgt                                >  1:4316799/1‑93 (MQ=255)

                                                          aaCGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACAcgtc                               >  2:5126281/1‑93 (MQ=255)

                                                             gtacgtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCTAACAAACCAGTTGGAAGTAACACGTCGtt                            >  1:1971316/1‑93 (MQ=255)

                                                             gtacgtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGtt                            <  1:5965476/93‑1 (MQ=255)

                                                              tacgtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTc                           >  1:1569998/1‑93 (MQ=255)

                                                               acgtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCa                          <  1:159646/93‑1 (MQ=255)

                                                                cgtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCaa                         >  2:3015462/1‑93 (MQ=255)

                                                                 gtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTTCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAg                        <  1:3717765/93‑1 (MQ=255)

                                                                  taGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGt                       >  2:790743/1‑93 (MQ=255)

                                                                  taGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGt                       <  1:4516108/93‑1 (MQ=255)

                                                                   agagCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTa                      <  2:4385848/93‑1 (MQ=255)

                                                                    gagCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTaa                     <  1:1200693/93‑1 (MQ=255)

                                                                    gagCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTaa                     >  2:4214974/1‑93 (MQ=255)

                                                                    gagCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTaa                     >  2:4143172/1‑93 (MQ=255)

                                                                     agCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAAt                    <  1:5997739/93‑1 (MQ=255)

                                                                      gCAGGAAATGGCTGGGGGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCCAGTAATg                   >  1:5599599/1‑93 (MQ=255)

                                                                         ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                <  2:4594426/93‑1 (MQ=255)

                                                                         ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                <  2:5554905/93‑1 (MQ=255)

                                                                         ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                <  2:1049815/93‑1 (MQ=255)

                                                                         ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                <  2:2139742/93‑1 (MQ=255)

                                                                           aaaTGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCcgc              <  1:2205750/93‑1 (MQ=255)

                                                                           aaaTGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCcgc              <  1:1914729/93‑1 (MQ=255)

                                                                           aaaTGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCcgc              >  2:3174723/1‑93 (MQ=255)

                                                                               ggCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCgcgctg          <  2:6031769/93‑3 (MQ=255)

                                                                               ggCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCg          >  2:3823158/1‑93 (MQ=255)

                                                                                  tGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCgtgt       >  1:4131143/1‑93 (MQ=255)

                                                                                   gggTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTa      <  2:1002453/93‑1 (MQ=255)

                                                                                   gggTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTa      <  1:3657508/93‑1 (MQ=255)

                                                                                    ggTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAg     >  1:6076557/1‑93 (MQ=255)

                                                                                       gcgcAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAGCCg  <  1:2514298/93‑1 (MQ=255)

                                                                                       gcgcAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAGCCg  <  1:2481800/93‑1 (MQ=255)

TAAGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAGCCG  >  NC_000913/3683343‑3683522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`