BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,722,558	T→C	G130G (GGA→GGG)	glyQ ←	glycine tRNA synthetase alpha subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,722,558	0	T	C	100.0%	769.5 / NA	238	G130G (GGA→GGG)	glyQ	glycine tRNA synthetase alpha subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/117); total (121/117)

Only 100 of 255 total aligned reads displayed.

GTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGTCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGA  >  NC_000913/3722469‑3722647

gTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGcccc                                                                                        >  1:5441920/1‑93 (MQ=255)

  aaCCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCa                                                                                      <  1:928097/93‑1 (MQ=255)

  aaCCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCa                                                                                      >  2:1949104/1‑93 (MQ=255)

     cGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGc                                                                                   >  2:2815993/1‑93 (MQ=255)

      ggTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCa                                                                                  >  2:2166168/1‑93 (MQ=255)

       gTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCAc                                                                                 >  2:1671759/1‑93 (MQ=255)

        tttACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCAcc                                                                                >  1:6145793/1‑93 (MQ=255)

         ttACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCAccc                                                                               <  2:4528263/93‑1 (MQ=255)

          tACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCa                                                                              >  1:4476556/1‑93 (MQ=255)

          tACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCa                                                                              <  2:410984/93‑1 (MQ=255)

            cacTCCAGACCACCAACCGGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGc                                                                            <  2:5685925/93‑1 (MQ=255)

             acTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCg                                                                           >  1:5993226/1‑93 (MQ=255)

              cTCCAGCCCACCAACCTGCTGGAAGTAAGTGACCTGCGTCACGTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGt                                                                          <  2:26671/93‑1 (MQ=255)

              cTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGt                                                                          >  2:1631782/1‑93 (MQ=255)

               tCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTc                                                                         >  2:2705337/1‑93 (MQ=255)

               tCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTc                                                                         >  2:2549411/1‑93 (MQ=255)

               tCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTc                                                                         <  2:2015640/93‑1 (MQ=255)

                ccAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCg                                                                        <  2:3963708/93‑1 (MQ=255)

                ccAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCg                                                                        >  2:664614/1‑93 (MQ=255)

                  aGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCggg                                                                      >  1:1599355/1‑93 (MQ=255)

                  aGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCggg                                                                      >  1:5693102/1‑93 (MQ=255)

                   gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt                                                                     >  2:1872666/1‑93 (MQ=255)

                   gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt                                                                     <  2:4639469/93‑1 (MQ=255)

                   gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt                                                                     <  1:4811283/93‑1 (MQ=255)

                   gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt                                                                     <  1:1101936/93‑1 (MQ=255)

                   gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt                                                                     >  1:3479031/1‑93 (MQ=255)

                    accaccAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGtt                                                                    <  2:4891076/93‑1 (MQ=255)

                     ccaccaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGttt                                                                   >  1:4140085/1‑93 (MQ=255)

                      caccaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGtttt                                                                  <  1:2436885/93‑1 (MQ=255)

                       accaATCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTc                                                                 >  2:3636991/1‑93 (MQ=255)

                       accaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTc                                                                 >  1:1760906/1‑93 (MQ=255)

                       accaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTc                                                                 >  1:1014712/1‑93 (MQ=255)

                       accaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTc                                                                 <  2:3553338/93‑1 (MQ=255)

                         caACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTccc                                                               <  2:232707/93‑1 (MQ=255)

                          aaCCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCa                                                              >  1:5543703/1‑93 (MQ=255)

                            ccTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGt                                                            >  2:3723423/1‑93 (MQ=255)

                             ctgctgGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGtt                                                           <  2:4936733/93‑1 (MQ=255)

                              tgctgGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTa                                                          >  1:5320360/1‑93 (MQ=255)

                              tgctgGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTa                                                          <  1:6112346/93‑1 (MQ=255)

                               gctgGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTAt                                                         >  2:3119935/1‑93 (MQ=255)

                                  ggAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCtt                                                      <  2:55889/93‑1 (MQ=255)

                                  ggAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCtt                                                      >  1:4341213/1‑93 (MQ=255)

                                   gAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTc                                                     >  2:1415518/1‑93 (MQ=255)

                                    aagtaagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTcc                                                    <  1:241850/93‑1 (MQ=255)

                                     agtaagtGAACTGCGTCACTTCCATGCCGTTCAACCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCa                                                   >  2:4799070/1‑93 (MQ=255)

                                      gtaagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCAc                                                  >  1:366846/1‑93 (MQ=255)

                                      ataagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCAc                                                  <  2:3684272/92‑1 (MQ=255)

                                       taagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACg                                                 <  2:3821871/93‑1 (MQ=255)

                                       taagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACg                                                 >  2:117730/1‑93 (MQ=255)

                                         agtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCGCGaa                                               <  2:4085477/93‑1 (MQ=255)

                                         agtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGaa                                               <  1:4385155/93‑1 (MQ=255)

                                          gtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGaaa                                              <  2:5052896/93‑1 (MQ=255)

                                           tGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGaaa                                              <  1:5405786/92‑1 (MQ=255)

                                           tGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGaaa                                              >  2:5405786/1‑92 (MQ=255)

                                           tGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAAc                                             >  2:1535264/1‑93 (MQ=255)

                                              aCTGTGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGa                                          <  2:1369747/93‑1 (MQ=255)

                                              aCTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGa                                          <  1:452227/93‑1 (MQ=255)

                                                tGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATg                                        <  2:5111618/93‑1 (MQ=255)

                                                tGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATg                                        >  1:2646498/1‑93 (MQ=255)

                                                   gTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCg                                     >  1:3988568/1‑93 (MQ=255)

                                                    tcgcTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGt                                    <  1:496614/90‑1 (MQ=255)

                                                    tCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGt                                    <  2:749821/93‑1 (MQ=255)

                                                     cACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTg                                   >  2:2259882/1‑93 (MQ=255)

                                                     cACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTg                                   >  1:2229046/1‑93 (MQ=255)

                                                       cTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGaa                                 <  1:1625358/93‑1 (MQ=255)

                                                       cTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGaa                                 >  1:2063539/1‑93 (MQ=255)

                                                       cTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGaa                                 >  1:5275210/1‑93 (MQ=255)

                                                       cTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGaa                                 >  1:4212540/1‑93 (MQ=255)

                                                        ttCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAAt                                >  1:3929812/1‑93 (MQ=255)

                                                         tCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATa                               >  2:3380646/1‑93 (MQ=255)

                                                         tCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATa                               >  1:2403378/1‑93 (MQ=255)

                                                          ccATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAg                              <  2:1746790/93‑1 (MQ=255)

                                                           cATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGt                             <  1:3161094/93‑1 (MQ=255)

                                                           cATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGt                             >  2:3069468/1‑93 (MQ=255)

                                                           cATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGt                             >  2:5929320/1‑93 (MQ=255)

                                                           cATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGt                             <  2:6019323/93‑1 (MQ=255)

                                                              gCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCgg                          <  2:5336900/93‑1 (MQ=255)

                                                              gCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCgg                          <  2:4592508/93‑1 (MQ=255)

                                                                cGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGt                        <  1:3043998/93‑1 (MQ=255)

                                                                 gTTCAGCCCCACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTc                       >  2:6148792/1‑93 (MQ=255)

                                                                 gTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTc                       <  2:2776527/93‑1 (MQ=255)

                                                                 gTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTc                       <  2:4370930/93‑1 (MQ=255)

                                                                 gTTCAGCCACACTTCCCAGCCCAGCACCCAGGCACCCAGCGTCGGGGTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTc                       >  1:3225601/1‑93 (MQ=255)

                                                                   tCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCa                     <  1:351729/93‑1 (MQ=255)

                                                                    cAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCAt                    <  2:4024545/93‑1 (MQ=255)

                                                                     aGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATg                   <  2:3003959/93‑1 (MQ=255)

                                                                     aGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATg                   <  2:1232823/93‑1 (MQ=255)

                                                                     aGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATg                   <  1:992477/93‑1 (MQ=255)

                                                                       ccACACTTCCCAGCCCAGCCCCCAGGCACCCCGCGTCGGGGTTTCCCAGTTATCTTCCACGAAACAGATGTCGTCAATAATCGGGTCCATGcc                 >  2:6039824/1‑93 (MQ=255)

                                                                        cacaCTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGccc                >  1:5841874/1‑93 (MQ=255)

                                                                        cacaCTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGcca                <  1:2311917/93‑2 (MQ=255)

                                                                         acacTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGcccc               >  2:4336124/1‑92 (MQ=255)

                                                                         acacTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCa               <  2:5649868/93‑1 (MQ=255)

                                                                            cTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGCTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGct            >  1:5611525/1‑93 (MQ=255)

                                                                             ttCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGctc           <  1:2815993/93‑1 (MQ=255)

                                                                                ccagcccagcCCCCAGGCACCCAGCGTCGGTTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCttt        <  2:2311464/93‑1 (MQ=255)

                                                                                 cagcccagccCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTc       <  1:3242231/93‑1 (MQ=255)

                                                                                  agcccagcccCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCa      <  1:5902950/93‑1 (MQ=255)

                                                                                   gcccacCCCCCAGGCACCCAGCGTCGGTTTTCCCCAGTTATCTCCCACGAAACGGATGTCGTAAATAGTGGGGTCCATCCCCAGCTTTTTCag     <  2:473789/93‑1 (MQ=255)

                                                                                    cccagCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCaga    <  2:9210/93‑1 (MQ=255)

GTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGTCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGA  >  NC_000913/3722469‑3722647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`