BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,729,567	T→C	L270L (TTG→CTG)	xylF →	xylose binding protein transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,729,567	0	T	C	100.0%	918.6 / NA	280	L270L (TTG→CTG)	xylF	xylose binding protein transport system
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (156/124); total (156/124)

Only 100 of 301 total aligned reads displayed.

GCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGAT  >  NC_000913/3729477‑3729656

 cAACCTCCGGCCAGGATGCGGATCTCGCAGGTATTAACCGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTgg                                                                                        <  2:2837911/93‑1 (MQ=255)

  aaTCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAGCGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGc                                                                                       >  1:3080581/1‑93 (MQ=255)

  aaTCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGc                                                                                       >  2:3208153/1‑93 (MQ=255)

  aaTCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGc                                                                                       <  1:5655442/93‑1 (MQ=255)

  aaTCTCCGGCCAGGATGCGGATCTCGCAGGGATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGc                                                                                       >  2:149236/1‑93 (MQ=255)

    tctcCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCaa                                                                                     <  2:3321386/93‑1 (MQ=255)

    tctcCGGCCAGGATGCGGACCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCaa                                                                                     >  2:3592513/1‑93 (MQ=255)

     ctcCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCaaa                                                                                    >  1:6122769/1‑93 (MQ=255)

      tcCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAAt                                                                                   >  2:5665376/1‑93 (MQ=255)

      tcCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAAt                                                                                   >  2:1989804/1‑93 (MQ=255)

        cGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATAc                                                                                 >  1:1756235/1‑93 (MQ=255)

         ggCCAGGAGGCGGACCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTCCTGGCAAATACt                                                                                <  2:4286078/93‑1 (MQ=255)

            cAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGcc                                                                             >  1:2110146/1‑93 (MQ=255)

             aGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCg                                                                            >  2:1674814/1‑93 (MQ=255)

                 tGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGa                                                                        >  2:2424714/1‑93 (MQ=255)

                 tGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGa                                                                        <  1:2902885/93‑1 (MQ=255)

                   cGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGaaa                                                                      >  2:2260256/1‑93 (MQ=255)

                   cGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGaaa                                                                      <  1:6030347/93‑1 (MQ=255)

                   cGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGaaa                                                                      <  2:1224074/93‑1 (MQ=255)

                    ggATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAAt                                                                     <  1:1235448/93‑1 (MQ=255)

                     gATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAAtt                                                                    <  1:4586244/93‑1 (MQ=255)

                      aTCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTg                                                                   >  1:1097177/1‑93 (MQ=255)

                       tctcGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGc                                                                  >  1:3455359/1‑93 (MQ=255)

                        ctcGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGcc                                                                 <  1:83494/93‑1 (MQ=255)

                         ttgCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCg                                                                >  2:3974286/3‑93 (MQ=255)

                         tcGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCg                                                                <  2:2958423/93‑1 (MQ=255)

                          cGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGt                                                               <  1:4122967/93‑1 (MQ=255)

                          cGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGt                                                               >  2:4386481/1‑93 (MQ=255)

                           gCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGtt                                                              <  1:4045781/93‑1 (MQ=255)

                            cAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTg                                                             >  2:5839985/1‑93 (MQ=255)

                             aGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGa                                                            <  2:1689184/93‑1 (MQ=255)

                             aGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGa                                                            >  2:4346240/1‑93 (MQ=255)

                              ggTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAg                                                           >  2:5497369/1‑93 (MQ=255)

                               gTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGt                                                          >  2:4842405/1‑93 (MQ=255)

                                tATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGtt                                                         <  2:2572972/93‑1 (MQ=255)

                                tATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGtt                                                         <  1:244149/93‑1 (MQ=255)

                                 aTTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAATCCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTg                                                        <  1:387206/93‑1 (MQ=255)

                                 aTTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTg                                                        >  2:1055431/1‑93 (MQ=255)

                                 aTTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTg                                                        <  1:3174234/93‑1 (MQ=255)

                                  ttAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTgg                                                       >  1:4371606/1‑93 (MQ=255)

                                       cGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCATAAATTGCCGTTGAGTTGGGCAAt                                                  <  2:5076004/93‑1 (MQ=255)

                                       cGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAAt                                                  <  1:2986090/93‑1 (MQ=255)

                                        gTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGGGTTGGGCAATg                                                 >  2:1324419/1‑93 (MQ=255)

                                         tATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATgg                                                >  2:4796935/1‑93 (MQ=255)

                                         tATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATgg                                                >  1:795955/1‑93 (MQ=255)

                                         tATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATgg                                                >  2:1756079/1‑93 (MQ=255)

                                         tATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATgg                                                <  1:5327503/93‑1 (MQ=255)

                                           ttGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTc                                              <  1:1671564/93‑1 (MQ=255)

                                                gcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGaa                                         >  2:5214399/1‑93 (MQ=255)

                                                gcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGaa                                         <  1:3993220/93‑1 (MQ=255)

                                                 ccGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAAc                                        <  2:4102455/93‑1 (MQ=255)

                                                  cGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAAcc                                       >  2:139182/1‑93 (MQ=255)

                                                   ggTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCa                                      >  2:4551544/1‑93 (MQ=255)

                                                   ggTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCa                                      <  2:4504618/93‑1 (MQ=255)

                                                    gTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCaa                                     <  1:1378419/93‑1 (MQ=255)

                                                    gTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCaa                                     >  2:5151915/1‑93 (MQ=255)

                                                     tACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCaaa                                    >  2:4313626/1‑93 (MQ=255)

                                                      aCGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCaaaa                                   <  2:5348812/93‑1 (MQ=255)

                                                       cGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAg                                  >  2:3135910/1‑93 (MQ=255)

                                                       cGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAg                                  <  1:4662808/93‑1 (MQ=255)

                                                          aaaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAg                               >  2:1034065/1‑93 (MQ=255)

                                                          aaaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAg                               <  2:663098/93‑1 (MQ=255)

                                                          aaaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAg                               >  2:4146354/1‑93 (MQ=255)

                                                           aaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGa                              >  2:3748829/1‑93 (MQ=255)

                                                              tATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATAc                           <  2:3273931/93‑1 (MQ=255)

                                                               aTGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATAcc                          <  1:448640/93‑1 (MQ=255)

                                                                 gACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACcac                        <  1:922402/93‑1 (MQ=255)

                                                                 gACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACcac                        <  1:5470835/93‑1 (MQ=255)

                                                                   cGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCacac                      <  1:3239598/93‑1 (MQ=255)

                                                                    ggTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACt                     >  2:618331/1‑93 (MQ=255)

                                                                     gtgtATAAACCTATTACGTTGCTGGCACATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTg                    >  2:5886967/1‑93 (MQ=255)

                                                                     gtgtATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTg                    <  2:6286396/93‑1 (MQ=255)

                                                                        tataAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaat                 <  2:3543994/93‑1 (MQ=255)

                                                                        tataAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaat                 >  2:6255103/1‑93 (MQ=255)

                                                                        tataAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaat                 >  2:5711372/1‑93 (MQ=255)

                                                                          taAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaataa               >  1:2186729/1‑93 (MQ=255)

                                                                           aaaCCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaataat              <  1:2757728/93‑1 (MQ=255)

                                                                           aaaCCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaataat              >  1:5890627/1‑93 (MQ=255)

                                                                            aaCCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATg             >  1:4952798/1‑93 (MQ=255)

                                                                            aaCCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATg             >  2:5466012/1‑93 (MQ=255)

                                                                             aCCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATgg            <  2:824131/93‑1 (MQ=255)

                                                                              ccTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGc           >  1:475872/1‑93 (MQ=255)

                                                                              ccTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTAAATAATGGc           >  1:1817053/1‑93 (MQ=255)

                                                                               cTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGcc          <  1:1528062/93‑1 (MQ=255)

                                                                               cTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGcc          <  2:5649385/93‑1 (MQ=255)

                                                                               cTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGcc          <  2:1823137/93‑1 (MQ=255)

                                                                                tATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCt         >  2:3862549/1‑93 (MQ=255)

                                                                                tATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCt         >  1:4993707/1‑93 (MQ=255)

                                                                                tATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCt         >  2:5947853/1‑93 (MQ=255)

                                                                                 aTTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTg        >  1:1452902/1‑93 (MQ=255)

                                                                                 aTTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTg        >  2:3397382/1‑93 (MQ=255)

                                                                                 aTTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTg        <  1:4220791/93‑1 (MQ=255)

                                                                                   tACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGaa      >  1:2706165/1‑93 (MQ=255)

                                                                                      gttgctGGCAAATACTGCCGCAGAAATTGTCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGa   <  1:6211852/93‑1 (MQ=255)

                                                                                      gttgctGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGa   >  1:342190/1‑93 (MQ=255)

                                                                                      gttgctGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGa   <  1:3685075/93‑1 (MQ=255)

                                                                                      gttgctGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGa   >  1:1619164/1‑93 (MQ=255)

                                                                                      gttgctGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGa   >  2:2135122/1‑93 (MQ=255)

                                                                                      gttgctGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGa   <  1:5762112/93‑1 (MQ=255)

                                                                                       ttgctgGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGAt  <  1:2639182/93‑1 (MQ=255)

GCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGAT  >  NC_000913/3729477‑3729656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`