BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	411,562	T→C	A76A (GCA→GCG)	araJ ←	AraJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	411,562	0	T	C	100.0%	678.1 / NA	211	A76A (GCA→GCG)	araJ	AraJ
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (103/108); total (103/108)

Only 100 of 224 total aligned reads displayed.

GCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGCCAAATTC  >  NC_000913/411472‑411651

  acaACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGACAAGAGAGCGATGATTGGCGCAACGAACACCACCCCCCGCGCat                                                                                       >  2:164817/1‑93 (MQ=255)

  acaACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCat                                                                                       >  2:3447370/1‑93 (MQ=255)

    aaCGCCACCAGAAACAACAAGATATGATTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCataa                                                                                     <  2:4891163/93‑1 (MQ=255)

     aCGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCataat                                                                                    <  2:2504573/93‑1 (MQ=255)

      cGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCataata                                                                                   <  1:5586405/93‑1 (MQ=255)

       gCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATAc                                                                                  >  1:685085/1‑93 (MQ=255)

       gCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATAc                                                                                  >  2:273297/1‑93 (MQ=255)

       gCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATAc                                                                                  <  1:299768/93‑1 (MQ=255)

         caccaGAACCAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACga                                                                                >  2:6107386/1‑93 (MQ=255)

         caccaGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACga                                                                                <  2:4032493/93‑1 (MQ=255)

         caccaGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAAAGTGCGATGATTGGAGCACCGACAACCACCCCCAGCGCATAATACga                                                                                >  1:284299/1‑93 (MQ=255)

          accaGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACgag                                                                               >  2:4317533/1‑93 (MQ=255)

           ccaGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACgaga                                                                              >  1:1765572/1‑93 (MQ=255)

           ccaGAAACAACAAGATATGTTGGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACgaga                                                                              <  1:205770/93‑1 (MQ=255)

            caGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTTGCGCACCGACCACCACCCCCAGCGCATAATACGAGAt                                                                             >  1:1272559/1‑93 (MQ=255)

             aGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATc                                                                            >  2:108818/1‑93 (MQ=255)

              gAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCa                                                                           <  1:896008/93‑1 (MQ=255)

              gAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCa                                                                           >  2:530676/1‑93 (MQ=255)

              gAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCa                                                                           >  2:1500960/1‑93 (MQ=255)

               aaaCAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCat                                                                          <  2:3721038/93‑1 (MQ=255)

               aaaCAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCat                                                                          <  1:4984552/93‑1 (MQ=255)

                aacaagAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCata                                                                         <  2:1005369/93‑1 (MQ=255)

                aacaacAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCata                                                                         <  1:3472654/93‑1 (MQ=255)

                aacaacAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCata                                                                         <  2:1597037/93‑1 (MQ=255)

                aacaacAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCata                                                                         <  1:5723098/93‑1 (MQ=255)

                aacaacAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCata                                                                         >  2:1926782/1‑93 (MQ=255)

                 acaacaAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCatat                                                                        <  2:2930395/93‑1 (MQ=255)

                 acaacaAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCatat                                                                        <  1:2777096/93‑1 (MQ=255)

                 acaacaAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCatat                                                                        <  2:6119854/93‑1 (MQ=255)

                  caacaaGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATg                                                                       <  2:3983895/93‑1 (MQ=255)

                     caaGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGccc                                                                    <  1:5248458/93‑1 (MQ=255)

                      aaGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCcg                                                                   >  1:3193700/1‑93 (MQ=255)

                       aGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCCGCGCATAATACGAGATCATATGCCcgg                                                                  >  1:2430109/1‑93 (MQ=255)

                       aGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCcgg                                                                  >  2:3151902/1‑93 (MQ=255)

                        gATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGCCCACCACCCCCAGCGCCTAATACGAGATCATCTGCCcgcc                                                                 >  1:4011915/1‑91 (MQ=255)

                        gATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCcggc                                                                 <  2:1391989/93‑1 (MQ=255)

                        gATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCcggc                                                                 <  2:4609855/93‑1 (MQ=255)

                        gATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCcggc                                                                 <  1:1001480/93‑1 (MQ=255)

                         atatGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCcggcg                                                                >  2:2084737/1‑93 (MQ=255)

                           atGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCggcggc                                                              <  2:1298618/93‑1 (MQ=255)

                           atGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCggcggc                                                              <  1:5023229/93‑1 (MQ=255)

                             gTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAg                                                            >  1:1038992/1‑93 (MQ=255)

                             gTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAg                                                            >  2:1319797/1‑93 (MQ=255)

                              tttGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGGGGCAgg                                                           >  1:4219006/1‑93 (MQ=255)

                              tttGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAgg                                                           <  2:3081676/93‑1 (MQ=255)

                               ttGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGa                                                          >  2:831684/1‑93 (MQ=255)

                               ttGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGa                                                          <  2:5546164/93‑1 (MQ=255)

                               ttGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGa                                                          <  1:4950001/93‑1 (MQ=255)

                               ttGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGa                                                          >  2:2326723/1‑93 (MQ=255)

                                tgagtgagTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGaa                                                         <  1:438790/93‑1 (MQ=255)

                                 gagtgagtAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAAt                                                        >  2:4265677/1‑93 (MQ=255)

                                  agtgagtAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATc                                                       <  2:4506383/93‑1 (MQ=255)

                                   gtgagtAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCg                                                      >  1:3766247/1‑93 (MQ=255)

                                      agtAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGaaa                                                   >  1:1072360/1‑93 (MQ=255)

                                      agtAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGaaa                                                   >  2:603792/1‑93 (MQ=255)

                                       gtAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAAt                                                  >  1:4461420/1‑93 (MQ=255)

                                          gCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTcc                                               <  2:4425679/93‑1 (MQ=255)

                                            ggCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTa                                             <  1:3603827/93‑1 (MQ=255)

                                             gCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTAc                                            <  2:4833897/93‑1 (MQ=255)

                                             gCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTAc                                            <  2:3819525/93‑1 (MQ=255)

                                              cTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACg                                           <  2:1779246/93‑1 (MQ=255)

                                               tGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGt                                          >  2:5960142/1‑93 (MQ=255)

                                                 gAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTa                                        <  2:581936/93‑1 (MQ=255)

                                                  aaaaGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTAt                                       <  1:3140788/93‑1 (MQ=255)

                                                    aaGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATgc                                     >  2:1982481/1‑93 (MQ=255)

                                                     agagTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATgcg                                    >  2:3765733/1‑93 (MQ=255)

                                                        gTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCa                                 >  2:1170795/1‑93 (MQ=255)

                                                        gTGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCa                                 <  2:2061382/93‑1 (MQ=255)

                                                         tGCGATGATTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAg                                <  1:143330/93‑1 (MQ=255)

                                                          gCGATGATTGGCGCACCGACCACCACCGCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAAGTCCTACGTTATGCGCCAGc                               <  1:1963306/93‑1 (MQ=255)

                                                            gatgatTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTc                             >  1:4528274/1‑93 (MQ=255)

                                                            gatgatTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTc                             >  1:5625555/1‑93 (MQ=255)

                                                            gatgatTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTc                             >  1:5552502/1‑93 (MQ=255)

                                                            gatgatTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTc                             >  1:4803706/1‑93 (MQ=255)

                                                              tgatTGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCg                           <  2:1491627/93‑1 (MQ=255)

                                                                 ttGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGa                        <  1:4256501/93‑1 (MQ=255)

                                                                 ttGGCGCACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGa                        >  2:481371/1‑93 (MQ=255)

                                                                   ggCGCACCGACCACCAACCCCAGCGCATAATACGAGATCATATGCCCGGAGGAAGGAATCAAAATCCCTACGTTATGCGCCAGCTCCGTGAGc                      <  2:5730531/93‑1 (MQ=255)

                                                                      gcACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACg                   >  1:6098732/1‑93 (MQ=255)

                                                                      gcACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTAAGCGCCAGCTCCGTGAGCACg                   >  1:1847294/1‑93 (MQ=255)

                                                                       cACCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGc                  >  1:167746/1‑93 (MQ=255)

                                                                        aCCGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGcc                 <  1:3866744/93‑1 (MQ=255)

                                                                         ccGACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGccc                <  1:2764393/93‑1 (MQ=255)

                                                                           gACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCAt              >  2:3484127/1‑93 (MQ=255)

                                                                           gACCACCACCCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCAt              >  2:2546249/1‑93 (MQ=255)

                                                                             ccaccaccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATaa            >  2:413989/1‑93 (MQ=255)

                                                                             ccaccaccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATaa            <  1:2211704/93‑1 (MQ=255)

                                                                             ccaccaccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATaa            <  1:2702842/93‑1 (MQ=255)

                                                                             ccaccaccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATaa            <  2:2994730/93‑1 (MQ=255)

                                                                              caccaccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCTTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAAt           <  1:6120685/93‑1 (MQ=255)

                                                                              caccaccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAAt           <  2:464055/93‑1 (MQ=255)

                                                                                ccaccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGc         <  2:5467544/93‑1 (MQ=255)

                                                                                ccaccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGc         >  1:3398556/1‑93 (MQ=255)

                                                                                 caccCCCAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGca        >  1:6050369/1‑92 (MQ=255)

                                                                                   cccccAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCGCCGTGAGCACGCCCATAATGCCaa      <  1:2634912/93‑1 (MQ=255)

                                                                                   cccccAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCAAAATTCTACCGTTATGCGCAAGTTCCGTGAGAAGCCCCAAAAT‑CCaaa     >  1:1175875/1‑93 (MQ=255)

                                                                                      ccAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGCCAAAtt   >  2:506073/1‑93 (MQ=255)

                                                                                      ccAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGCCAAAtt   >  2:5163875/1‑93 (MQ=255)

                                                                                      ccAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGCCAAAtt   <  2:5508815/93‑1 (MQ=255)

                                                                                      ccAGCGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGCCAAAtt   <  1:4101021/93‑1 (MQ=255)

GCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGTGAGCACGCCCATAATGCCAAATTC  >  NC_000913/411472‑411651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`