BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,731,386	T→C	V13A (GTA→GCA)	xylH →	XylH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,731,386	0	T	C	100.0%	838.3 / NA	260	V13A (GTA→GCA)	xylH	XylH
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/137); total (123/137)

Only 100 of 269 total aligned reads displayed.

TCATAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGTACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGTTCT  >  NC_000913/3731296‑3731475

tCATAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCAc                                                                                         >  1:6171444/1‑93 (MQ=255)

 cATAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCAcc                                                                                        <  2:5658910/93‑1 (MQ=255)

  aTAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCg                                                                                       >  1:347868/1‑93 (MQ=255)

  aTAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCg                                                                                       >  2:5136710/1‑93 (MQ=255)

  aTAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCg                                                                                       <  2:4924398/93‑1 (MQ=255)

    aaCCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGAc                                                                                     >  1:132928/1‑93 (MQ=255)

    aaCCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAAATGGCCGCACCGAc                                                                                     >  1:212041/1‑93 (MQ=255)

      ccTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACAt                                                                                   >  2:3268906/1‑93 (MQ=255)

       cTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATc                                                                                  <  1:1667407/93‑1 (MQ=255)

       cTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATc                                                                                  >  2:3329602/1‑93 (MQ=255)

       cTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATc                                                                                  <  2:5838182/93‑1 (MQ=255)

        tGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATcc                                                                                 >  1:1485732/1‑93 (MQ=255)

         gACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCg                                                                                >  2:4771226/1‑93 (MQ=255)

          aCTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCgg                                                                               <  1:1953284/93‑1 (MQ=255)

           cTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCTCACCGACATCCGGt                                                                              <  1:2650907/93‑1 (MQ=255)

            tCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTg                                                                             <  1:2856326/93‑1 (MQ=255)

            tCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTg                                                                             >  1:428690/1‑93 (MQ=255)

             cAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGGGAAATTGGCCGCACCGACATCgggggg                                                                            >  1:4428600/1‑93 (MQ=255)

               ggAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCt                                                                          >  2:1620556/1‑93 (MQ=255)

                gAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCtt                                                                         <  1:6244455/93‑1 (MQ=255)

                 aGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTtc                                                                        <  2:4838495/93‑1 (MQ=255)

                 aGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTtc                                                                        <  1:6113341/93‑1 (MQ=255)

                  gCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTtct                                                                       <  2:4453245/93‑1 (MQ=255)

                   cAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTtctc                                                                      <  1:1027446/93‑1 (MQ=255)

                    aGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTcc                                                                     >  2:2303041/1‑93 (MQ=255)

                    aGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTcc                                                                     <  2:2795232/93‑1 (MQ=255)

                     ggTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCg                                                                    <  1:4218607/93‑1 (MQ=255)

                      gTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCgg                                                                   <  1:1497148/93‑1 (MQ=255)

                      gTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCgg                                                                   >  1:2008309/1‑93 (MQ=255)

                      gTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCgg                                                                   >  2:2573347/1‑93 (MQ=255)

                        gATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGc                                                                 >  2:2836838/1‑93 (MQ=255)

                         aTGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCt                                                                >  2:6274682/1‑93 (MQ=255)

                         aTGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCt                                                                <  1:2404210/93‑1 (MQ=255)

                           ggAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGa                                                              <  1:2469434/93‑1 (MQ=255)

                           ggAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGa                                                              <  1:5037654/93‑1 (MQ=255)

                           ggAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGa                                                              >  2:4573015/1‑93 (MQ=255)

                            gAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGaa                                                             >  1:3247139/1‑93 (MQ=255)

                              aGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAAt                                                           <  1:4807026/93‑1 (MQ=255)

                               gCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATc                                                          <  2:3717852/93‑1 (MQ=255)

                               gCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATc                                                          <  1:5960609/93‑1 (MQ=255)

                                 cGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCAc                                                        >  1:2458308/1‑93 (MQ=255)

                                   cATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTg                                                      <  2:1142015/93‑1 (MQ=255)

                                      tGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAAt                                                   >  2:3835673/1‑93 (MQ=255)

                                        aggagCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAAttt                                                 >  2:695700/1‑93 (MQ=255)

                                         ggagCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTg                                                >  1:3560924/1‑93 (MQ=255)

                                         ggagCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTg                                                >  1:746745/1‑93 (MQ=255)

                                          gagCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGc                                               <  1:1392826/93‑1 (MQ=255)

                                           agCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCa                                              <  1:23015/93‑1 (MQ=255)

                                            gCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAg                                             >  1:4056818/1‑93 (MQ=255)

                                            gCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAg                                             >  2:1947424/1‑93 (MQ=255)

                                              gAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGt                                           >  2:2482644/1‑93 (MQ=255)

                                              gAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGt                                           >  1:5578021/1‑93 (MQ=255)

                                              gAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGt                                           <  1:6279522/93‑1 (MQ=255)

                                               aaCATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTc                                          >  2:1573225/1‑93 (MQ=255)

                                               aaCATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTc                                          >  1:1143225/1‑93 (MQ=255)

                                               aaCATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTc                                          >  2:490749/1‑93 (MQ=255)

                                                aCATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCt                                         >  2:3898970/1‑93 (MQ=255)

                                                  atcatGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTc                                       <  1:1843105/93‑1 (MQ=255)

                                                  atcatGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTc                                       <  2:6036659/93‑1 (MQ=255)

                                                     atGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGtg                                    >  1:6027050/1‑93 (MQ=255)

                                                      tGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGtga                                   <  1:5471261/93‑1 (MQ=255)

                                                      tGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGtga                                   <  1:2993321/93‑1 (MQ=255)

                                                          gAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTgatgat                               <  2:808428/93‑1 (MQ=255)

                                                          gAAAAGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTgatgat                               <  2:1527256/93‑1 (MQ=255)

                                                           aaaaGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGAtt                              >  1:1196736/1‑93 (MQ=255)

                                                            aaaGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTg                             >  1:5290820/1‑93 (MQ=255)

                                                             aaGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGc                            <  2:5907334/93‑1 (MQ=255)

                                                             aaGCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGc                            <  2:3350985/93‑1 (MQ=255)

                                                               gCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAg                          <  1:2776348/93‑1 (MQ=255)

                                                               gCAATCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAg                          >  2:2206420/1‑93 (MQ=255)

                                                                 aaTCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCt                        >  1:3653761/1‑93 (MQ=255)

                                                                  aTCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTa                       >  1:2590453/1‑93 (MQ=255)

                                                                  aTCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTa                       >  1:448876/1‑93 (MQ=255)

                                                                   tCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTat                      <  1:5920164/93‑1 (MQ=255)

                                                                   tCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTat                      >  2:538818/1‑93 (MQ=255)

                                                                   tCCGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTat                      >  2:3576146/1‑93 (MQ=255)

                                                                    ccGTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTatc                     <  2:5268100/93‑1 (MQ=255)

                                                                      gTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTatcat                   >  2:3449883/1‑93 (MQ=255)

                                                                      gTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTatcat                   <  2:4110389/93‑1 (MQ=255)

                                                                      gTCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTatcat                   <  1:832601/93‑1 (MQ=255)

                                                                       tCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTatcatc                  >  1:5384835/1‑93 (MQ=255)

                                                                       tCTGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTatcatc                  >  2:1380739/1‑93 (MQ=255)

                                                                         tGAAGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGc                >  1:3933285/1‑93 (MQ=255)

                                                                            aGTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAAt             <  1:523658/93‑1 (MQ=255)

                                                                             gTGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATc            >  2:2939740/1‑93 (MQ=255)

                                                                              tGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCa           <  1:4128849/93‑1 (MQ=255)

                                                                              tGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCa           <  2:4259803/93‑1 (MQ=255)

                                                                              tGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCa           >  1:4900771/1‑93 (MQ=255)

                                                                              tGAAATTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCa           <  1:2075407/93‑1 (MQ=255)

                                                                                aaaTTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATg         >  1:4584994/1‑93 (MQ=255)

                                                                                aaaTTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATg         <  1:2660664/93‑1 (MQ=255)

                                                                                 aaTTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGc        <  2:6255235/93‑1 (MQ=255)

                                                                                 aaTTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGc        >  2:2013150/1‑93 (MQ=255)

                                                                                 aaTTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGc        >  2:2655328/1‑93 (MQ=255)

                                                                                  aTTGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCt       >  2:185001/1‑93 (MQ=255)

                                                                                   ttGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTg      <  1:4617152/93‑1 (MQ=255)

                                                                                    tGGCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGt     >  2:4734221/1‑93 (MQ=255)

                                                                                     ggCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGtt    >  2:273730/1‑93 (MQ=255)

                                                                                      gCCGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGTTc   <  1:1045250/93‑1 (MQ=255)

                                                                                       ccGCACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGTTCt  <  2:1012610/93‑1 (MQ=255)

TCATAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGTACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGTTCT  >  NC_000913/3731296‑3731475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`