BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,749,710	T→C	L30P (CTT→CCT)	yiaU →	putative transcriptional regulator LYSR‑type

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,749,710	0	T	C	100.0%	353.8 / NA	108	L30P (CTT→CCT)	yiaU	putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (102/6); total (102/6)

Only 100 of 111 total aligned reads displayed.

CGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAG  >  NC_000913/3749620‑3749798

cGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTg                                                                                        >  1:6121410/1‑93 (MQ=255)

 gATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTgg                                                                                       >  2:236453/1‑93 (MQ=255)

 gATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTgg                                                                                       >  1:1670395/1‑93 (MQ=255)

  aTGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGc                                                                                      >  2:711123/1‑93 (MQ=255)

  aTGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGc                                                                                      >  2:5283047/1‑93 (MQ=255)

  aTGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGc                                                                                      >  1:631192/1‑93 (MQ=255)

   tGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCa                                                                                     >  2:211081/1‑93 (MQ=255)

     aCAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATc                                                                                   >  2:4399234/1‑93 (MQ=255)

        aaaTTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGca                                                                                >  2:3950108/1‑93 (MQ=255)

        aaaTTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGca                                                                                >  2:1466328/1‑93 (MQ=255)

          aTTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGcaca                                                                              >  1:185306/1‑93 (MQ=255)

          aTTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGcaca                                                                              >  1:5066735/1‑93 (MQ=255)

           ttACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAg                                                                             >  1:673415/1‑93 (MQ=255)

             aCAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGc                                                                           >  2:3106806/1‑93 (MQ=255)

             aCAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGc                                                                           >  1:1294476/1‑93 (MQ=255)

              cAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGcc                                                                          >  2:1941581/1‑93 (MQ=255)

                aCTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCaa                                                                        >  1:826747/1‑93 (MQ=255)

                 cTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAAc                                                                       >  1:5800351/1‑93 (MQ=255)

                 cTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAAc                                                                       >  2:1042920/1‑93 (MQ=255)

                 cTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAAc                                                                       >  1:548934/1‑93 (MQ=255)

                   tAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACga                                                                     >  1:2030119/1‑92 (MQ=255)

                      gTACCGGGCGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAg                                                                  >  2:6159665/1‑93 (MQ=255)

                      gTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAg                                                                  >  2:3548409/1‑93 (MQ=255)

                       tACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGc                                                                 >  1:886921/1‑93 (MQ=255)

                       tACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGc                                                                 >  1:3201887/1‑93 (MQ=255)

                        aCCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCa                                                                >  1:5905896/1‑93 (MQ=255)

                        aCCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCa                                                                >  2:2569358/1‑93 (MQ=255)

                        aCCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCa                                                                >  1:2122157/1‑93 (MQ=255)

                         ccGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAACCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCaa                                                               >  2:350173/1‑93 (MQ=255)

                          cGGGCGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGCCATCGCACAGGCCAACGACAGCaaa                                                              >  2:2238209/1‑93 (MQ=255)

                          cGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCaaa                                                              >  1:2053542/1‑93 (MQ=255)

                          cGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCaaa                                                              >  2:2006825/1‑93 (MQ=255)

                           gggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAat                                                             >  1:2967768/1‑93 (MQ=255)

                           gggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAat                                                             >  2:3258542/1‑93 (MQ=255)

                            ggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAata                                                            >  2:5051293/1‑93 (MQ=255)

                            ggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAata                                                            <  1:1628522/93‑1 (MQ=255)

                             gAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAatat                                                           >  1:3843822/1‑93 (MQ=255)

                             gAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAatat                                                           >  1:3589223/1‑93 (MQ=255)

                              aGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATc                                                          >  1:5788141/1‑93 (MQ=255)

                              aGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATc                                                          >  2:6024049/1‑93 (MQ=255)

                               gTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCt                                                         >  1:4181794/1‑93 (MQ=255)

                                ttAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCtt                                                        >  2:1641174/1‑93 (MQ=255)

                                ttAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCtt                                                        >  2:670018/1‑93 (MQ=255)

                                 tAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTg                                                       >  1:622371/1‑93 (MQ=255)

                                  aaaaaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGc                                                      >  2:6256292/1‑93 (MQ=255)

                                      aTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGAt                                                  >  1:1483790/1‑93 (MQ=255)

                                       ttATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGAtt                                                 >  2:5483862/1‑93 (MQ=255)

                                          tctcGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTg                                              >  2:2574013/1‑93 (MQ=255)

                                          tctcGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTg                                              >  2:2965116/1‑93 (MQ=255)

                                            tcGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCACATATCTTGCTGATTTTGaa                                            >  2:6274681/1‑93 (MQ=255)

                                            tcGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGaa                                            >  1:2317862/1‑93 (MQ=255)

                                            tcGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGaa                                            >  1:2528166/1‑93 (MQ=255)

                                             cGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAAt                                           >  1:1606096/1‑93 (MQ=255)

                                              gggaaTCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATc                                          >  2:1030382/4‑93 (MQ=255)

                                              ggTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGcaca                                                                              <  2:2621731/57‑1 (MQ=255)

                                              ggTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATc                                          >  1:849701/1‑93 (MQ=255)

                                              ggTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATc                                          >  1:6031633/1‑93 (MQ=255)

                                                tAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCaa                                        >  1:5238990/1‑93 (MQ=255)

                                                tAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCaa                                        <  1:2163011/93‑1 (MQ=255)

                                                 aaTCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCaaa                                       >  2:1572029/1‑93 (MQ=255)

                                                 aaTCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCaaa                                       >  2:4327237/1‑93 (MQ=255)

                                                 aaTCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCaaa                                       >  2:2329454/1‑93 (MQ=255)

                                                  aTCGCGCCCAGTAAAAATATCAGCCATGCCGCGACTGTACCTGGCACCGCACAGCCCAACGTCAGCAAATATCTTGCTGATTTTGAATCaaaa                                      <  2:4686921/93‑1 (MQ=255)

                                                   tCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAg                                     >  2:1504399/1‑93 (MQ=255)

                                                   tCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAg                                     >  1:351342/1‑93 (MQ=255)

                                                      cTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTgg                                  >  1:5168315/1‑93 (MQ=255)

                                                       tGCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCCTCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTggg                                 >  2:5132253/1‑93 (MQ=255)

                                                        gCCAGTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGt                                >  1:2995791/1‑93 (MQ=255)

                                                            gTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTaa                            >  1:5355640/1‑93 (MQ=255)

                                                            gTGAAAATATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTaa                            >  2:3534866/1‑93 (MQ=255)

                                                               aaaaTATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAg                         >  1:2105996/1‑93 (MQ=255)

                                                               aaaaTATCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAg                         >  2:4785675/1‑93 (MQ=255)

                                                                   tatCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCtt                     >  1:111783/1‑93 (MQ=255)

                                                                   tatCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCtt                     <  1:5878116/93‑1 (MQ=255)

                                                                   tatCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCtt                     >  1:2331845/1‑93 (MQ=255)

                                                                    atCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCttt                    >  1:1286560/1‑93 (MQ=255)

                                                                    atCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCttt                    >  1:2553263/1‑93 (MQ=255)

                                                                     tCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg                   >  1:838277/1‑93 (MQ=255)

                                                                     tCAGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg                   >  2:5584388/1‑93 (MQ=255)

                                                                       aGCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAACAGTCTTTGAc                 >  2:2584572/1‑93 (MQ=255)

                                                                        gCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGAcc                >  1:1017982/1‑93 (MQ=255)

                                                                        gCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGAcc                >  2:4419700/1‑93 (MQ=255)

                                                                        gCCATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGAcc                >  1:3513279/1‑93 (MQ=255)

                                                                         ccATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCg               <  1:6024049/93‑1 (MQ=255)

                                                                          cATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGa              >  2:3140862/1‑93 (MQ=255)

                                                                          cATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGa              >  2:1324627/1‑93 (MQ=255)

                                                                          cATGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGa              >  2:4002610/1‑93 (MQ=255)

                                                                           aTGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGaa             >  2:1002145/1‑93 (MQ=255)

                                                                           aTGCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTCAATCAAAAGTGGGTTTAAAAGTCTTTGACCGaa             >  2:718707/1‑93 (MQ=255)

                                                                             gCCGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAacc           <  2:2709111/93‑1 (MQ=255)

                                                                              ccGCGACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAacca          >  2:2295953/1‑93 (MQ=255)

                                                                               cgcgACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAaccac         >  1:5669405/1‑93 (MQ=255)

                                                                                gcgACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAaccacc        >  1:5134930/1‑93 (MQ=255)

                                                                                  gACTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCg      >  1:4719748/1‑93 (MQ=255)

                                                                                   aCTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCgg     >  2:4642446/1‑93 (MQ=255)

                                                                                   aCTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCgg     >  1:1502183/1‑93 (MQ=255)

                                                                                   aCTGTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCgg     >  2:3287742/1‑93 (MQ=255)

                                                                                   aCTGTACCTGGCATCGCACAGGCCAACGTCACCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCgg     >  1:5673232/1‑93 (MQ=255)

                                                                                   aCTGGACCTGGCATCGCACAGGCCAACGGCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGGTTAAAAGTCTTTGACCGAACCACCCgg     >  1:5074300/1‑93 (MQ=255)

                                                                                      gTACCTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAg  >  1:5849287/1‑93 (MQ=255)

CGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAG  >  NC_000913/3749620‑3749798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`