BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,755,517	T→C	intergenic (‑63/+127)	yiaY ← / ← selB	putative oxidoreductase/selenocysteinyl‑tRNA‑specific translation factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,755,517	0	T	C	100.0%	525.1 / NA	161	intergenic (‑63/+127)	yiaY/selB	putative oxidoreductase/selenocysteinyl‑tRNA‑specific translation factor
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/153); total (8/153)

Only 100 of 162 total aligned reads displayed.

AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAATTT  >  NC_000913/3755427‑3755606

aaGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGa                                                                                         <  2:4210598/93‑1 (MQ=255)

aaGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGa                                                                                         <  2:728031/93‑1 (MQ=255)

aaGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGa                                                                                         <  1:4569132/93‑1 (MQ=255)

aaGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGa                                                                                         <  1:2145959/93‑1 (MQ=255)

aaGAAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGa                                                                                         <  2:5810920/93‑1 (MQ=255)

 aGGAATAAAGAACGTTGAAGCTGCCATAACACCCTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  1:5838958/93‑1 (MQ=255)

 aGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  2:658711/93‑1 (MQ=255)

 aGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  1:2407045/93‑1 (MQ=255)

  ggAATAAAGAAGGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATc                                                                                       <  1:528521/93‑1 (MQ=255)

  ggAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATc                                                                                       <  1:2715725/93‑1 (MQ=255)

    aaTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAg                                                                                     <  1:3258912/93‑1 (MQ=255)

     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    <  2:731827/93‑1 (MQ=255)

     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    >  2:3846762/1‑93 (MQ=255)

     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    <  1:2241894/93‑1 (MQ=255)

      tAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGta                                                                                   >  2:3886046/1‑93 (MQ=255)

       aaaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAATAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtat                                                                                  <  1:3614392/93‑1 (MQ=255)

       aaaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtat                                                                                  <  2:4929348/93‑1 (MQ=255)

         aGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtatta                                                                                <  2:4963161/93‑1 (MQ=255)

          gAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtattat                                                                               <  1:3003043/93‑1 (MQ=255)

          gAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtattat                                                                               <  2:4168366/93‑1 (MQ=255)

           aaCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTattatt                                                                              <  1:385546/93‑1 (MQ=255)

           aaCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTattatt                                                                              <  1:1026422/93‑1 (MQ=255)

           aaCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTattatt                                                                              <  1:1016471/93‑1 (MQ=255)

           aaCGTTAAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTattatt                                                                              <  2:3348039/93‑1 (MQ=255)

            aCGTTGACGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGCTCAGTATTATTg                                                                             <  1:3406592/93‑1 (MQ=255)

             cGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGa                                                                            <  2:4374541/93‑1 (MQ=255)

             cGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGa                                                                            <  2:2490282/93‑1 (MQ=255)

             cGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGa                                                                            <  1:3630112/93‑1 (MQ=255)

               ttGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGAtt                                                                          <  1:6169883/93‑1 (MQ=255)

               ttGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGAtt                                                                          >  2:3757056/1‑93 (MQ=255)

               tggAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGAtt                                                                          <  2:5319743/91‑1 (MQ=255)

                tGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTa                                                                         <  2:1737868/93‑1 (MQ=255)

                tGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTa                                                                         <  1:2870261/93‑1 (MQ=255)

                tGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTa                                                                         <  1:533266/93‑1 (MQ=255)

                tGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTa                                                                         <  2:1098609/93‑1 (MQ=255)

                 gAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAt                                                                        <  2:2660345/93‑1 (MQ=255)

                  aaGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATc                                                                       <  1:4354068/93‑1 (MQ=255)

                  aaGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATc                                                                       <  2:3554998/93‑1 (MQ=255)

                     cTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaaa                                                                    <  1:2825115/93‑1 (MQ=255)

                      tGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaaaa                                                                   <  1:1405213/93‑1 (MQ=255)

                          aTAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTaa                                                               <  2:669614/93‑1 (MQ=255)

                          aTAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTaa                                                               <  1:2388641/93‑1 (MQ=255)

                           tAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAAt                                                              <  2:1424463/93‑1 (MQ=255)

                           aaaCACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAAt                                                              <  2:4433591/92‑1 (MQ=255)

                            aaCACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATc                                                             <  1:1208123/93‑1 (MQ=255)

                             acacacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCt                                                            <  2:1901849/93‑1 (MQ=255)

                               acacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaa                                                          <  1:6252901/93‑1 (MQ=255)

                               acacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaa                                                          <  1:5412723/93‑1 (MQ=255)

                               acacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaa                                                          <  2:2322827/93‑1 (MQ=255)

                                cacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaat                                                         <  2:2029145/93‑1 (MQ=255)

                                cacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaat                                                         <  1:896984/93‑1 (MQ=255)

                                cacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaat                                                         <  2:5682804/93‑1 (MQ=255)

                                 acTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaata                                                        <  1:933069/93‑1 (MQ=255)

                                  cTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaataa                                                       <  1:4978409/93‑1 (MQ=255)

                                   tCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATaaa                                                      >  2:1471408/1‑93 (MQ=255)

                                     cTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATaaaaa                                                    <  1:1999420/93‑1 (MQ=255)

                                     cTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATaaaaa                                                    <  2:554106/93‑1 (MQ=255)

                                        aaaGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGca                                                 <  2:1788803/93‑1 (MQ=255)

                                          aGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGcaca                                               <  1:681778/93‑1 (MQ=255)

                                          aGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGcaca                                               <  1:1730034/93‑1 (MQ=255)

                                           gtgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAt                                              <  2:213277/93‑1 (MQ=255)

                                           gtgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAt                                              >  1:2632354/1‑93 (MQ=255)

                                           gtgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAt                                              <  1:2705721/93‑1 (MQ=255)

                                            tgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAtt                                             <  2:689986/93‑1 (MQ=255)

                                            tgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACCATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAtt                                             <  1:1615099/93‑1 (MQ=255)

                                               aaaaaaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTa                                          <  2:6222623/93‑1 (MQ=255)

                                                aaaaaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTAt                                         <  1:3473372/93‑1 (MQ=255)

                                                aaaaaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTAt                                         <  1:4182787/93‑1 (MQ=255)

                                                  aaaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTc                                       <  1:2004940/93‑1 (MQ=255)

                                                  aaaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTc                                       <  2:4315648/93‑1 (MQ=255)

                                                   aaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCa                                      <  1:3721933/93‑1 (MQ=255)

                                                     gggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCAtt                                    <  1:4847406/93‑1 (MQ=255)

                                                         gggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAAc                                <  2:1467209/93‑1 (MQ=255)

                                                          ggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACa                               <  1:2568007/93‑1 (MQ=255)

                                                           gcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACaa                              <  2:1348356/93‑1 (MQ=255)

                                                            cAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAt                             <  2:4091166/93‑1 (MQ=255)

                                                              gCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAtgt                           <  1:5747460/93‑1 (MQ=255)

                                                               cTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAtgtg                          <  1:1561956/93‑1 (MQ=255)

                                                                 tACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCt                        <  1:4844158/93‑1 (MQ=255)

                                                                    tGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtttt                     <  2:3757672/93‑1 (MQ=255)

                                                                    tGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtttt                     <  1:6039405/93‑1 (MQ=255)

                                                                     gAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCttttt                    >  2:4799994/1‑93 (MQ=255)

                                                                      aGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtttttt                   <  1:247171/93‑1 (MQ=255)

                                                                        gATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTa                 <  2:2331278/93‑1 (MQ=255)

                                                                         aTTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTaa                <  1:5637518/93‑1 (MQ=255)

                                                                          ttttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTaaa               <  1:5089490/93‑1 (MQ=255)

                                                                          ttttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTaaa               <  1:1461645/93‑1 (MQ=255)

                                                                             tCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTc            <  2:3119702/93‑1 (MQ=255)

                                                                             tCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTc            <  2:3895044/93‑1 (MQ=255)

                                                                              cATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCa           <  2:1406513/93‑1 (MQ=255)

                                                                                 tCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATaa        <  1:5040898/93‑1 (MQ=255)

                                                                                 tCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATaa        <  1:1129267/93‑1 (MQ=255)

                                                                                  cGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAg       <  2:2710188/93‑1 (MQ=255)

                                                                                  cGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAg       <  1:1471408/93‑1 (MQ=255)

                                                                                  cGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAg       <  2:1638362/93‑1 (MQ=255)

                                                                                   gAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGa      <  2:6115297/93‑1 (MQ=255)

                                                                                    aaaaTACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGaa     <  1:5907486/93‑1 (MQ=255)

                                                                                     aaaTACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAAt    <  1:5601917/93‑1 (MQ=255)

                                                                                      aaTACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAAtt   >  2:4761011/1‑93 (MQ=255)

                                                                                       atacGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAAttt  <  2:875466/93‑1 (MQ=255)

AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAATTT  >  NC_000913/3755427‑3755606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`