BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	419,492	T→C	R226R (CGT→CGC)	brnQ →	branched chain amino acid transport system II carrier protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	419,492	0	T	C	100.0%	716.7 / NA	221	R226R (CGT→CGC)	brnQ	branched chain amino acid transport system II carrier protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (114/107); total (114/107)

Only 100 of 230 total aligned reads displayed.

CATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTCGCT  >  NC_000913/419402‑419581

cATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCta                                                                                         >  2:793268/1‑93 (MQ=255)

cATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCta                                                                                         <  2:420605/93‑1 (MQ=255)

cATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCta                                                                                         >  1:372867/1‑93 (MQ=255)

cATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCta                                                                                         <  1:3007098/93‑1 (MQ=255)

 aTGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCtat                                                                                        >  1:4862705/1‑93 (MQ=255)

 aTGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCtat                                                                                        >  1:4368035/1‑93 (MQ=255)

  tGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCtata                                                                                       >  2:5188045/1‑93 (MQ=255)

      tACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGt                                                                                   >  1:1420974/1‑93 (MQ=255)

       aCGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTc                                                                                  >  2:5078560/1‑93 (MQ=255)

         gCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTg                                                                                >  1:4956812/1‑93 (MQ=255)

         gCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTg                                                                                >  2:5923501/1‑93 (MQ=255)

          cTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTgg                                                                               <  1:1022409/93‑1 (MQ=255)

           tGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTggg                                                                              >  2:4373761/1‑93 (MQ=255)

             ggCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCt                                                                            >  2:4706264/1‑93 (MQ=255)

             ggCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCt                                                                            <  2:3465156/93‑1 (MQ=255)

             ggCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCt                                                                            >  1:5666167/1‑93 (MQ=255)

                gcAATGGTGTTTGGTATCTTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGc                                                                         <  2:5569832/93‑1 (MQ=255)

                gcAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGc                                                                         >  2:1734395/1‑93 (MQ=255)

                 cAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGcc                                                                        >  2:417095/1‑93 (MQ=255)

                  aaTGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCt                                                                       >  1:5364713/1‑93 (MQ=255)

                   aTGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTg                                                                      <  1:3294437/93‑1 (MQ=255)

                    tGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGa                                                                     <  1:2293440/93‑1 (MQ=255)

                    tGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGa                                                                     >  1:5823931/1‑93 (MQ=255)

                     ggTGTTTGTTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGAt                                                                    <  1:953568/93‑1 (MQ=255)

                     ggTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTgct                                                                    >  1:414654/1‑91 (MQ=255)

                     ggTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGAt                                                                    <  2:1770395/93‑1 (MQ=255)

                     ggTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGAt                                                                    <  1:5087398/93‑1 (MQ=255)

                      gtgtTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATg                                                                   <  2:4833469/93‑1 (MQ=255)

                       tgtTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATgg                                                                  <  2:4955140/93‑1 (MQ=255)

                         tttGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCg                                                                >  1:5659985/1‑93 (MQ=255)

                         tttGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCg                                                                <  1:2245548/93‑1 (MQ=255)

                          ttGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCgg                                                               <  1:1332408/93‑1 (MQ=255)

                            ggTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCgggg                                                             >  1:1667990/1‑92 (MQ=255)

                            ggTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGgt                                                             <  1:517001/93‑1 (MQ=255)

                              tATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGgtgt                                                           <  2:514794/93‑1 (MQ=255)

                              tATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGgtgt                                                           <  1:4450620/93‑1 (MQ=255)

                              tATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGgcgt                                                           >  1:81860/1‑93 (MQ=255)

                               aTCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGtt                                                          >  2:2515544/1‑93 (MQ=255)

                                tCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTg                                                         <  2:4524086/93‑1 (MQ=255)

                                 cGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTgg                                                        <  2:519895/93‑1 (MQ=255)

                                  gTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGt                                                       <  2:2313531/93‑1 (MQ=255)

                                   ttATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTc                                                      >  2:465738/1‑93 (MQ=255)

                                   ttATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTc                                                      <  1:2500930/93‑1 (MQ=255)

                                   ttATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGGGTTGGTc                                                      >  2:4353142/1‑93 (MQ=255)

                                   ttATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGGGTTGGTc                                                      >  2:269958/1‑93 (MQ=255)

                                       tGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGAc                                                  <  1:755436/93‑1 (MQ=255)

                                        gTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGAct                                                 >  1:5745061/1‑93 (MQ=255)

                                          tAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGActct                                               <  1:2900830/93‑1 (MQ=255)

                                            aCGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTctgc                                             >  1:6072295/1‑93 (MQ=255)

                                            aCGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTctgc                                             >  1:2613459/1‑93 (MQ=255)

                                             cgcgGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTctgct                                            <  2:3708200/93‑1 (MQ=255)

                                                 gcgcGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTAc                                        >  1:2158467/1‑93 (MQ=255)

                                                 gcgcGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTATGCTGTAc                                        <  2:6113011/93‑1 (MQ=255)

                                                 gcgcGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGCGTTGGGCTGACTCTGCTGTAc                                        >  1:1166789/1‑93 (MQ=255)

                                                  cgcgTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTAcc                                       <  2:1482749/93‑1 (MQ=255)

                                                   gcgTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCt                                      <  1:3193273/93‑1 (MQ=255)

                                                    gttgctcGTGGGGTTACCGAAGCGCGTCTGCTGACCCGCTATGCCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTg                                     <  2:1990361/89‑1 (MQ=255)

                                                    cgTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTg                                     <  1:3825819/93‑1 (MQ=255)

                                                      ttCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTggg                                   >  2:775156/1‑92 (MQ=255)

                                                      ttCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGgc                                   >  2:543723/1‑93 (MQ=255)

                                                      ttCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGgc                                   >  1:43989/1‑93 (MQ=255)

                                                      ttCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGCGTGACTCTGATGTACCTgtg                                   >  2:1273089/1‑91 (MQ=255)

                                                      ttCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGCGTTGGGCTGACTCTGCTGTACCCGgc                                   >  2:5732705/1‑93 (MQ=255)

                                                         tcGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCt                                >  1:5209811/1‑93 (MQ=255)

                                                         tcGTGGCGTGACGGAAGCGCGTCTGCTCACCCGCTATACTGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCt                                <  2:3796697/93‑1 (MQ=255)

                                                          cGTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTg                               >  1:6135700/1‑93 (MQ=255)

                                                           gTGGCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGt                              <  2:1142206/93‑1 (MQ=255)

                                                             ggCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTc                            >  1:1932154/1‑93 (MQ=255)

                                                              gCGTTACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTcc                           <  1:4677184/93‑1 (MQ=255)

                                                                  tACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCt                       <  2:2655478/93‑1 (MQ=255)

                                                                  tACCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCt                       >  1:5241904/1‑93 (MQ=255)

                                                                   aCCGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTg                      <  2:4123855/93‑1 (MQ=255)

                                                                    ccGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCtcg                     <  2:3975175/93‑3 (MQ=255)

                                                                    ccGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTgg                     <  1:4264690/93‑1 (MQ=255)

                                                                     cGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTggg                    <  1:1152950/93‑1 (MQ=255)

                                                                     cGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTggg                    >  1:5905406/1‑93 (MQ=255)

                                                                     cGAAGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTAACTGGCGCTGTTCCGGCTcgg                    >  2:1594793/1‑93 (MQ=255)

                                                                       aaGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGCCTGGGGt                  >  1:3146191/1‑93 (MQ=255)

                                                                        aGCGCGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTc                 <  1:1384595/93‑1 (MQ=255)

                                                                         gcgcGTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCa                <  1:1293878/93‑1 (MQ=255)

                                                                             gTCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACa            >  1:340246/1‑93 (MQ=255)

                                                                              tCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAg           >  2:3825117/1‑93 (MQ=255)

                                                                              tCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAg           <  1:240040/93‑1 (MQ=255)

                                                                              tCTGCTGACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAg           >  2:1075983/1‑93 (MQ=255)

                                                                               ctgctgACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAgc          <  1:3560547/93‑1 (MQ=255)

                                                                                tgctgACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAgcg         <  1:4935015/93‑1 (MQ=255)

                                                                                tgctgACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAgcg         >  1:1537643/1‑93 (MQ=255)

                                                                                 gctgACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAgcgc        <  2:5573203/93‑1 (MQ=255)

                                                                                 gctgACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAgcgc        <  2:3375310/93‑1 (MQ=255)

                                                                                 gccgACCCGCTATACCGTCTGGGCTGGCCTGATGGCTGGCGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAgcgc        <  1:2123871/90‑1 (MQ=255)

                                                                                  ctgACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGcgcg       <  1:3026154/93‑1 (MQ=255)

                                                                                   tgccccGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGt      <  2:4428066/90‑1 (MQ=255)

                                                                                   tgACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGt      <  2:2983098/93‑1 (MQ=255)

                                                                                    gACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGGGCGTc     >  1:5537008/1‑93 (MQ=255)

                                                                                    gACCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGGCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGGCAGACAGCGCGTc     >  2:2261295/1‑93 (MQ=255)

                                                                                     aCCCGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTCg    <  1:6103856/93‑1 (MQ=255)

                                                                                     aCCCGCTATACCGTCTGGGCTCGCCTGCTGGCGGGTGTTGGGCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTcc    >  2:928288/1‑92 (MQ=255)

                                                                                      cccGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTCGc   <  2:503/93‑1 (MQ=255)

                                                                                       ccGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTCGCt  >  2:3867577/1‑93 (MQ=255)

                                                                                       ccGCTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTCGCt  <  2:5493966/93‑1 (MQ=255)

CATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTCGCT  >  NC_000913/419402‑419581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`