BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,775,779	A→G	I252V (ATT→GTT)	lldP →	L‑lactate permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,775,779	0	A	G	100.0%	676.1 / NA	209	I252V (ATT→GTT)	lldP	L‑lactate permease
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (79/130); total (79/130)

Only 100 of 221 total aligned reads displayed.

AGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGG  >  NC_000913/3775690‑3775868

agaCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTa                                                                                        <  1:2900900/93‑1 (MQ=255)

 gaCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTAt                                                                                       >  2:3912528/1‑93 (MQ=255)

  aCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTAtc                                                                                      >  1:437750/1‑93 (MQ=255)

  aCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTAtc                                                                                      >  1:2288913/1‑93 (MQ=255)

   cGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTAtct                                                                                     <  2:2381245/93‑1 (MQ=255)

    gTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTAtctc                                                                                    <  2:847627/93‑1 (MQ=255)

    gTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTAtctc                                                                                    <  1:2217659/93‑1 (MQ=255)

      ggCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCtt                                                                                  >  2:5095841/1‑93 (MQ=255)

      ggCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCtt                                                                                  <  1:6201132/93‑1 (MQ=255)

          tGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCt                                                                              <  1:4479896/93‑1 (MQ=255)

          tGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCt                                                                              >  1:2107432/1‑93 (MQ=255)

          tGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCt                                                                              >  1:3501973/1‑93 (MQ=255)

           gCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGGGCTGCCGGACGTTATCTCTTCGCTg                                                                             <  2:1670288/93‑1 (MQ=255)

           gCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTg                                                                             <  1:1690725/93‑1 (MQ=255)

           gCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTg                                                                             <  2:5307240/93‑1 (MQ=255)

           gCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTg                                                                             <  2:3078393/93‑1 (MQ=255)

             ggTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGt                                                                           <  2:2902944/93‑1 (MQ=255)

              gTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTa                                                                          >  1:4334948/1‑93 (MQ=255)

                cGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATc                                                                        >  2:1760838/1‑93 (MQ=255)

                 gTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCa                                                                       <  2:6161155/93‑1 (MQ=255)

                  tGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCAc                                                                      >  2:3635832/1‑93 (MQ=255)

                   ggTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACt                                                                     >  1:2377566/1‑93 (MQ=255)

                    gTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTg                                                                    <  2:2589054/93‑1 (MQ=255)

                    gTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTg                                                                    >  1:4389227/1‑93 (MQ=255)

                     ttGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGc                                                                   <  2:2785166/93‑1 (MQ=255)

                     ttGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGc                                                                   <  1:3947828/93‑1 (MQ=255)

                     ttGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGc                                                                   <  2:4332475/93‑1 (MQ=255)

                       gcgggcggCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGctc                                                                 <  2:4130570/93‑1 (MQ=255)

                       gcgggcggCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGctc                                                                 <  2:4863329/93‑1 (MQ=255)

                          ggcggcTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGc                                                              >  1:3698236/1‑93 (MQ=255)

                            cggcTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCt                                                            <  2:456070/93‑1 (MQ=255)

                             ggcTCGTTTTCCATCGCTCAGTACCTTAGCTCTAACTTCATTTGGTCCGAGCTGCCGGACGTTATCTCTTCGCTTGTATCACTGCTCTGCCTg                                                           >  2:4523539/1‑93 (MQ=255)

                                tCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACg                                                        >  1:2527793/1‑93 (MQ=255)

                                 cGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGc                                                       >  2:5446811/1‑93 (MQ=255)

                                  gTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCt                                                      <  2:4501237/93‑1 (MQ=255)

                                  gTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCt                                                      <  1:1597844/93‑1 (MQ=255)

                                     tGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGtt                                                   >  2:5823975/1‑93 (MQ=255)

                                      gCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTc                                                  >  2:1126009/1‑93 (MQ=255)

                                      gCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTc                                                  <  1:853191/93‑1 (MQ=255)

                                       ccATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTcc                                                 <  2:6274242/93‑1 (MQ=255)

                                       ccATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTcc                                                 <  1:5466884/93‑1 (MQ=255)

                                        cATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCt                                                <  2:794528/93‑1 (MQ=255)

                                          tCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCa                                              >  2:4400488/1‑93 (MQ=255)

                                              tCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACg                                          <  1:114022/93‑1 (MQ=255)

                                               cAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGc                                         >  2:4785760/1‑93 (MQ=255)

                                                aGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCt                                        <  2:2179127/93‑1 (MQ=255)

                                                aGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCt                                        <  1:3584786/93‑1 (MQ=255)

                                                  tACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTgg                                      <  1:3875874/93‑1 (MQ=255)

                                                  tACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTgg                                      >  1:3444876/1‑93 (MQ=255)

                                                    ccTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCa                                    <  1:5771822/93‑1 (MQ=255)

                                                     cTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAg                                   <  1:3812812/93‑1 (MQ=255)

                                                     cTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAg                                   >  1:4559041/1‑93 (MQ=255)

                                                      ttAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGc                                  >  1:4058903/1‑93 (MQ=255)

                                                      ttAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGc                                  >  1:4525096/1‑93 (MQ=255)

                                                       tAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGcc                                 <  2:1091313/93‑1 (MQ=255)

                                                        cgCTCTATCTTCATTGGGCCGGAGCTGCCGGACGTTACCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCa                                <  2:1434234/92‑1 (MQ=255)

                                                        aGCTCTAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCa                                <  2:3134098/93‑1 (MQ=255)

                                                           tctAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTg                             <  1:1745271/93‑1 (MQ=255)

                                                           tctAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTg                             >  2:668649/1‑93 (MQ=255)

                                                            ctAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGc                            <  2:5052801/93‑1 (MQ=255)

                                                            ctAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGc                            <  1:510214/93‑1 (MQ=255)

                                                            ctAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGc                            >  2:2217979/1‑93 (MQ=255)

                                                             tAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCg                           >  1:2757603/1‑93 (MQ=255)

                                                             tAACTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCg                           >  2:2247476/1‑93 (MQ=255)

                                                              aaCTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCgg                          >  2:1883459/1‑92 (MQ=255)

                                                               aCTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCgtg                         <  1:2303308/93‑1 (MQ=255)

                                                               aCTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCgtg                         >  1:1001270/1‑93 (MQ=255)

                                                                cTTCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCgtgt                        <  1:3099449/93‑1 (MQ=255)

                                                                 ttCATTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTa                       <  1:5026162/93‑1 (MQ=255)

                                                                    aTTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTc                    <  2:4973512/93‑1 (MQ=255)

                                                                    aTTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTc                    <  2:4729052/93‑1 (MQ=255)

                                                                    aTTGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTc                    >  2:1546593/1‑93 (MQ=255)

                                                                     ttGGGCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTcc                   <  1:4776640/93‑1 (MQ=255)

                                                                       gggCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGt                 >  1:603336/1‑93 (MQ=255)

                                                                       gggCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGt                 <  2:1301832/93‑1 (MQ=255)

                                                                        gggcGGAGCTGCCGAACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGtt                <  1:1259314/90‑1 (MQ=255)

                                                                        ggCCGTAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGtt                <  1:2043185/93‑1 (MQ=255)

                                                                        ggCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGtt                <  2:3470863/93‑1 (MQ=255)

                                                                        ggCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGtt                <  2:5601698/93‑1 (MQ=255)

                                                                         gCCGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGttt               >  1:1852006/1‑93 (MQ=255)

                                                                          ccGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGtttt              <  2:2001363/93‑1 (MQ=255)

                                                                          ccGGAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGtttt              <  2:4508385/93‑1 (MQ=255)

                                                                             gAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGt           >  2:2103350/1‑93 (MQ=255)

                                                                             gAGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGt           >  1:2609069/1‑93 (MQ=255)

                                                                              aGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTg          >  1:5499600/1‑93 (MQ=255)

                                                                              aGCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGCTTTGGTg          >  2:5744142/1‑93 (MQ=255)

                                                                               gCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGa         <  1:937421/93‑1 (MQ=255)

                                                                               gCTGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGa         <  2:3298523/93‑1 (MQ=255)

                                                                                 tGCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGAtt       <  1:3246111/93‑1 (MQ=255)

                                                                                  gCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGAttt      >  1:2432480/1‑93 (MQ=255)

                                                                                  gCCGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGAttt      <  1:4829985/93‑1 (MQ=255)

                                                                                    cGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgg    <  1:2941409/93‑1 (MQ=255)

                                                                                    cGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgg    <  1:3005751/93‑1 (MQ=255)

                                                                                    cGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgg    <  2:6018319/93‑1 (MQ=255)

                                                                                    cGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgg    >  1:148973/1‑93 (MQ=255)

                                                                                    cGGACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgg    >  1:4047682/1‑93 (MQ=255)

                                                                                     ggACGTTTTCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAGACGCTGGCAGCCAGTGCGTGTATTGCGTTTTGGTGATTTggg   >  2:5130044/1‑93 (MQ=255)

                                                                                      gACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgggg  <  2:516511/93‑1 (MQ=255)

                                                                                      gACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgggg  <  1:5583906/93‑1 (MQ=255)

                                                                                      gACGTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgggg  <  1:4175393/93‑1 (MQ=255)

AGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGG  >  NC_000913/3775690‑3775868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`