BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,795,982	A→G	S320P (TCC→CCC)	rfaK ←	putative hexose transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,795,982	0	A	G	100.0%	874.6 / NA	271	S320P (TCC→CCC)	rfaK	putative hexose transferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (169/102); total (169/102)

Only 100 of 279 total aligned reads displayed.

TCTTTACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGACCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGATATGAACAA  >  NC_000913/3795892‑3796071

tctTTACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGcc                                                                                         >  2:5251761/1‑93 (MQ=255)

   ttACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCaaa                                                                                      >  1:4098948/1‑93 (MQ=255)

   ttACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCaaa                                                                                      >  1:5147989/1‑93 (MQ=255)

    tACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAAt                                                                                     >  1:1364296/1‑93 (MQ=255)

    tACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAAt                                                                                     >  2:4676389/1‑93 (MQ=255)

    tACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAAt                                                                                     >  1:2673932/1‑93 (MQ=255)

     aCTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAAtt                                                                                    >  2:3552741/1‑93 (MQ=255)

       tGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTaa                                                                                  >  1:3898089/1‑93 (MQ=255)

       tGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTaa                                                                                  <  2:4891002/93‑1 (MQ=255)

       tGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTaa                                                                                  >  1:5595423/1‑93 (MQ=255)

        gAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTaaa                                                                                 <  1:1002047/93‑1 (MQ=255)

         aaTTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAAt                                                                                <  2:1201710/93‑1 (MQ=255)

          aTTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATg                                                                               >  2:4218377/1‑93 (MQ=255)

           ttAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGc                                                                              <  1:1572293/93‑1 (MQ=255)

           ttAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGc                                                                              >  1:5487442/1‑93 (MQ=255)

            tAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCg                                                                             >  1:4642076/1‑93 (MQ=255)

            tAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCg                                                                             >  2:307032/1‑93 (MQ=255)

             aGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGa                                                                            >  1:2164325/1‑93 (MQ=255)

              gTTAAAGTTTCAGTATTGATATCTACCTCCGTACATGTTGGGGATACTACTTGTATAGATGTATGATGAATCGGGGGTCAAATTAAAAGCGAg                                                                           >  1:6300558/1‑93 (MQ=255)

               ttAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAgg                                                                          >  2:4507107/1‑93 (MQ=255)

                tAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAggg                                                                         >  1:6193577/1‑93 (MQ=255)

                   aGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGata                                                                      >  1:4374699/1‑93 (MQ=255)

                    gTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGatat                                                                     >  2:2351974/1‑93 (MQ=255)

                    gTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGatat                                                                     >  1:170682/1‑93 (MQ=255)

                    gTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGatat                                                                     >  1:103498/1‑93 (MQ=255)

                     tttCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATAtt                                                                    >  1:291360/1‑93 (MQ=255)

                      ttCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTc                                                                   <  2:1608098/93‑1 (MQ=255)

                       tCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTcc                                                                  >  2:5814209/1‑93 (MQ=255)

                        cAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCg                                                                 <  1:655028/93‑1 (MQ=255)

                          gTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGa                                                               <  2:2142601/93‑1 (MQ=255)

                          gTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGa                                                               <  2:837810/93‑1 (MQ=255)

                          gTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGa                                                               <  2:6098858/93‑1 (MQ=255)

                            aTCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGt                                                             >  2:2390670/1‑93 (MQ=255)

                            aTCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGt                                                             >  1:232237/1‑93 (MQ=255)

                            aTCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGt                                                             <  1:1469640/93‑1 (MQ=255)

                             tCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTa                                                            >  1:583608/1‑93 (MQ=255)

                             tCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTa                                                            <  1:5088752/93‑1 (MQ=255)

                             tCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTa                                                            >  1:3043309/1‑93 (MQ=255)

                             tCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTa                                                            <  1:110578/93‑1 (MQ=255)

                               gATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACg                                                          >  1:4045372/1‑93 (MQ=255)

                                atatCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGt                                                         >  1:3182846/1‑93 (MQ=255)

                                atatCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGt                                                         >  1:25430/1‑93 (MQ=255)

                                atatCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGt                                                         >  1:6004727/1‑93 (MQ=255)

                                atatCTTTTACCGTATATGTTGGGGATACTATTTGTATAGACTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGt                                                         >  1:3759354/1‑93 (MQ=255)

                                 tatCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTg                                                        <  2:407876/93‑1 (MQ=255)

                                 tatCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTg                                                        <  1:1812037/93‑1 (MQ=255)

                                  atCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGa                                                       <  1:4470710/93‑1 (MQ=255)

                                   tCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGaa                                                      >  2:3784269/1‑93 (MQ=255)

                                     ttttACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAAtt                                                    >  2:237829/1‑93 (MQ=255)

                                     ttttACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAAtt                                                    >  2:2748272/1‑93 (MQ=255)

                                      tttACGGTATATGTTGGGGATACTATTTGTATATATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGAATATTCCGGAGTACGGGAATTa                                                   <  2:1954957/93‑1 (MQ=255)

                                      tttACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTa                                                   <  1:3430955/93‑1 (MQ=255)

                                      tttACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTa                                                   <  2:5196804/93‑1 (MQ=255)

                                      tttACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTa                                                   <  2:411290/93‑1 (MQ=255)

                                       ttACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAg                                                  <  1:4822420/93‑1 (MQ=255)

                                       ttACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAg                                                  <  2:1329483/93‑1 (MQ=255)

                                        tACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAgg                                                 <  2:4754259/93‑1 (MQ=255)

                                          ccGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGt                                               >  1:626167/1‑93 (MQ=255)

                                            gTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTaa                                             <  1:3469172/93‑1 (MQ=255)

                                            gTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTaa                                             >  2:3966378/1‑93 (MQ=255)

                                            gTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTaa                                             >  2:1377785/1‑93 (MQ=255)

                                             tataTGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTaaa                                            >  1:5648023/1‑93 (MQ=255)

                                               tatGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAAt                                          >  2:5470426/1‑93 (MQ=255)

                                                 tGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGc                                        >  2:566142/1‑93 (MQ=255)

                                                 tGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGc                                        <  1:2439264/93‑1 (MQ=255)

                                                    tGGGGATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAg                                     <  1:4192818/93‑1 (MQ=255)

                                                     ggggATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGc                                    >  2:1483546/1‑93 (MQ=255)

                                                        gATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGtt                                 >  1:3142368/1‑93 (MQ=255)

                                                        gATACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGtt                                 <  1:5350340/93‑1 (MQ=255)

                                                         aTACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTg                                >  2:6056204/1‑93 (MQ=255)

                                                         aTACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTg                                >  1:4065320/1‑93 (MQ=255)

                                                          tACTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTgg                               >  1:5931454/1‑93 (MQ=255)

                                                           aCTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGt                              >  2:6221526/1‑93 (MQ=255)

                                                            cTATTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGtt                             <  2:2566031/93‑1 (MQ=255)

                                                              aTTTGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTa                           <  2:1034654/93‑1 (MQ=255)

                                                                ttGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATg                         <  2:626695/93‑1 (MQ=255)

                                                                ttGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATg                         >  1:2082426/1‑93 (MQ=255)

                                                                 tGTATAGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGa                        <  2:4618187/93‑1 (MQ=255)

                                                                   tataGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATa                      >  1:4559714/1‑93 (MQ=255)

                                                                     taGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAg                    <  1:912592/93‑1 (MQ=255)

                                                                     taGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGAAAAATGCAAGCGTTGGTTTATGATAAg                    >  1:3597010/1‑93 (MQ=255)

                                                                      aGATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGc                   >  1:2617314/1‑93 (MQ=255)

                                                                       gATTTATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGcc                  >  2:2642934/1‑93 (MQ=255)

                                                                         tttATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGc                >  2:311185/1‑93 (MQ=255)

                                                                         tttATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGc                <  1:3951406/93‑1 (MQ=255)

                                                                          ttATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCa               >  1:1271034/1‑93 (MQ=255)

                                                                           tATGATGATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAg              >  1:4825773/1‑93 (MQ=255)

                                                                            atgatgATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGc             <  2:2654704/93‑1 (MQ=255)

                                                                            atgatgATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGc             <  1:5466792/93‑1 (MQ=255)

                                                                            atgatgATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGc             <  1:4589763/93‑1 (MQ=255)

                                                                            atgatgATTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGCTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGc             <  1:5706595/93‑1 (MQ=255)

                                                                             tgatgaTTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCg            >  1:3322059/1‑93 (MQ=255)

                                                                              gatgatTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGa           >  2:3151465/1‑93 (MQ=255)

                                                                                tgatTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGata         >  2:2894980/1‑93 (MQ=255)

                                                                                 gatTCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGatat        >  2:1694865/1‑93 (MQ=255)

                                                                                    tCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGATATGaa     <  2:5112634/93‑1 (MQ=255)

                                                                                    tCGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGATATGaa     >  1:774991/1‑93 (MQ=255)

                                                                                     cGGGGGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGATATGAAc    <  1:278784/93‑1 (MQ=255)

                                                                                      ggggGCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGATATGAACa   >  1:3109470/1‑93 (MQ=255)

                                                                                       ggggCCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGATATGAACaa  >  1:5413193/1‑93 (MQ=255)

TCTTTACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATACTATTTGTATAGATTTATGATGATTCGGGGACCAAATTAAATGCGAGGGATATTCCGGAGTACGTGAATTAGGGTAAAATGCAAGCGTTGGTTTATGATAAGCCGCAGCGATATGAACAA  >  NC_000913/3795892‑3796071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`