BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	432,965	T→C	V96A (GTG→GCG)	ribD →	pyrimidine deaminase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	432,965	0	T	C	100.0%	660.1 / NA	207	V96A (GTG→GCG)	ribD	pyrimidine deaminase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/111); total (96/111)

Only 100 of 220 total aligned reads displayed.

CGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCC  >  NC_000913/432875‑433054

cGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCgg                                                                                         <  1:2916136/93‑1 (MQ=255)

 gACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGt                                                                                        >  1:5065771/1‑93 (MQ=255)

 gACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGt                                                                                        <  1:461373/93‑1 (MQ=255)

  aCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGtt                                                                                       >  2:77144/1‑93 (MQ=255)

  aCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGtt                                                                                       >  2:3330179/1‑93 (MQ=255)

  aCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGtt                                                                                       >  2:2619266/1‑93 (MQ=255)

  aCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGtt                                                                                       <  2:1306152/93‑1 (MQ=255)

  aCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGtt                                                                                       <  1:2582522/93‑1 (MQ=255)

    cGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGc                                                                                     <  1:611621/93‑1 (MQ=255)

    cGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGc                                                                                     <  1:4302538/93‑1 (MQ=255)

     gCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGcc                                                                                    >  1:1116568/1‑93 (MQ=255)

      ccTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCt                                                                                   <  1:6143985/93‑1 (MQ=255)

       cTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTc                                                                                  <  2:1814519/93‑1 (MQ=255)

        tATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCg                                                                                 >  2:6243888/1‑93 (MQ=255)

        tATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCg                                                                                 >  2:4755772/1‑93 (MQ=255)

        tATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCg                                                                                 >  1:5113973/1‑93 (MQ=255)

         aTGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGa                                                                                <  1:1075433/93‑1 (MQ=255)

         aTGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGa                                                                                >  2:3358747/1‑93 (MQ=255)

         aTGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGa                                                                                <  2:3188503/93‑1 (MQ=255)

          tGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGAt                                                                               >  2:4915322/1‑93 (MQ=255)

          tGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGAt                                                                               <  2:2254351/93‑1 (MQ=255)

             cacaCTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCa                                                                            <  2:2974602/93‑1 (MQ=255)

              acacTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCaa                                                                           <  1:2150862/93‑1 (MQ=255)

                acTCGAACCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGa                                                                         <  1:4778476/93‑1 (MQ=255)

                      aCCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTaa                                                                   >  2:1568105/1‑93 (MQ=255)

                      aCCCTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTaa                                                                   <  1:984332/93‑1 (MQ=255)

                       cccTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAAc                                                                  <  1:788013/93‑1 (MQ=255)

                       cccTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAAc                                                                  >  2:6207619/1‑93 (MQ=255)

                       cccTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAAc                                                                  <  1:2483126/93‑1 (MQ=255)

                        ccTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAAcc                                                                 >  1:5352801/1‑93 (MQ=255)

                        ccTGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAAcc                                                                 >  1:122313/1‑93 (MQ=255)

                          tGTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCg                                                               >  2:4155640/1‑93 (MQ=255)

                           gTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGc                                                              <  1:1716079/93‑1 (MQ=255)

                           gTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGc                                                              <  2:2458419/93‑1 (MQ=255)

                           gTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGc                                                              >  1:6110198/1‑93 (MQ=255)

                           gTAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACACGc                                                              >  2:2159/1‑93 (MQ=255)

                            tAGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCa                                                             <  2:4482366/93‑1 (MQ=255)

                             aGCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAg                                                            <  1:5922721/93‑1 (MQ=255)

                              gCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAgg                                                           >  1:4114911/1‑93 (MQ=255)

                              gCCATCATGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAgg                                                           >  2:1194476/1‑93 (MQ=255)

                                 atcatGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCg                                                        >  1:5605192/1‑93 (MQ=255)

                                  tcatGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGc                                                       <  2:5078093/93‑1 (MQ=255)

                                  tcatGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGc                                                       >  1:5291312/1‑93 (MQ=255)

                                   catGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCt                                                      <  2:3449560/93‑1 (MQ=255)

                                   catGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCt                                                      <  1:2391306/93‑1 (MQ=255)

                                   catGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCt                                                      <  2:3835537/93‑1 (MQ=255)

                                    atGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTg                                                     <  1:3681183/93‑1 (MQ=255)

                                     tGGTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTgg                                                    <  1:3421900/93‑1 (MQ=255)

                                      ggTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTggg                                                   >  1:911389/1‑93 (MQ=255)

                                       gTCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGc                                                  >  2:3985155/1‑93 (MQ=255)

                                        tCGTACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCg                                                 >  1:3849986/1‑93 (MQ=255)

                                           tACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTgg                                              >  2:1901055/1‑93 (MQ=255)

                                           tACGCCATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTgg                                              >  2:2779880/1‑93 (MQ=255)

                                            accccATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGa                                             <  1:4859801/90‑1 (MQ=255)

                                               ccATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACtt                                          >  2:3579244/1‑93 (MQ=255)

                                               ccATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACtt                                          >  1:4967136/1‑93 (MQ=255)

                                               ccATCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACtt                                          >  1:3252414/1‑93 (MQ=255)

                                                 atcGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTa                                        >  1:1458542/3‑93 (MQ=255)

                                                 atcGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTa                                        <  2:1883722/91‑1 (MQ=255)

                                                  tcGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTAc                                       <  1:3517173/92‑1 (MQ=255)

                                                   cGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTAcc                                      <  1:6158968/93‑1 (MQ=255)

                                                   cGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTAcc                                      <  1:3174883/93‑1 (MQ=255)

                                                    gTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCg                                     <  2:1284111/93‑1 (MQ=255)

                                                     tGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGt                                    >  2:5538847/1‑93 (MQ=255)

                                                     tGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGt                                    >  1:3199422/1‑93 (MQ=255)

                                                     tGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGt                                    <  1:1676415/93‑1 (MQ=255)

                                                         gtgACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGc                                <  2:4526207/93‑1 (MQ=255)

                                                         gtgACGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGc                                >  2:5965274/1‑93 (MQ=255)

                                                             cGCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACa                            <  2:4031300/93‑1 (MQ=255)

                                                              gCACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAg                           <  1:305286/93‑1 (MQ=255)

                                                               cACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAgg                          <  1:2279150/93‑1 (MQ=255)

                                                               cACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAgg                          >  2:5787864/1‑93 (MQ=255)

                                                               cACTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAgg                          >  1:1988297/1‑93 (MQ=255)

                                                                aCTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGTGTGGACTTTACCGTCTGCAACAGGc                         <  1:879894/93‑1 (MQ=255)

                                                                aCTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGc                         <  2:4226019/93‑1 (MQ=255)

                                                                aCTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTAGATGCAAGATCCTAGCCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGc                         <  1:631466/93‑1 (MQ=255)

                                                                 cTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGcg                        >  2:1639173/1‑92 (MQ=255)

                                                                 cTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCt                        >  2:679065/1‑93 (MQ=255)

                                                                 cTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCt                        <  1:3803023/93‑1 (MQ=255)

                                                                 cTCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCt                        >  2:5571765/1‑93 (MQ=255)

                                                                  tCATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACGCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTg                       <  1:4429118/93‑1 (MQ=255)

                                                                   cATCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTgg                      <  2:2391544/93‑1 (MQ=255)

                                                                    aTCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGc                     >  1:4074917/1‑93 (MQ=255)

                                                                     tCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCa                    >  1:226199/1‑93 (MQ=255)

                                                                     tCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCa                    >  2:1380193/1‑93 (MQ=255)

                                                                     tCGCCGCTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCa                    >  1:953301/1‑93 (MQ=255)

                                                                      cgccgcTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCAt                   <  2:3247670/93‑1 (MQ=255)

                                                                        ccgcTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTg                 <  2:5109679/93‑1 (MQ=255)

                                                                         cgcTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGa                <  2:4447811/93‑1 (MQ=255)

                                                                         cgcTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGa                <  1:134443/93‑1 (MQ=255)

                                                                          gcTGGCGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGAc               >  2:4366332/1‑93 (MQ=255)

                                                                               cGTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGAAGTCAg          >  2:232864/1‑93 (MQ=255)

                                                                                gTAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGc         >  2:4664437/1‑93 (MQ=255)

                                                                                 tAGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGcc        <  1:5777960/93‑1 (MQ=255)

                                                                                  aGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa       <  2:5093494/93‑1 (MQ=255)

                                                                                  aGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa       <  2:5620846/93‑1 (MQ=255)

                                                                                  aGCGCGCGCGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa       <  2:1126146/93‑1 (MQ=255)

                                                                                      cgcgcgGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGc   >  1:2035191/1‑93 (MQ=255)

                                                                                      cgcgcgGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGc   <  2:527394/93‑1 (MQ=255)

                                                                                       gcgcGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGcc  >  2:4549654/1‑93 (MQ=255)

CGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCC  >  NC_000913/432875‑433054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`